Irinotecan_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.207491
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.145235
NLGN1 neuroligin 1 0.128168
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.124509
YAP1 Yes-associated protein 1 0.121122
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.112705
HMGA2 high mobility group AT-hook 2 0.102168
RRM2 ribonucleotide reductase M2 0.101904
ZSWIM6 zinc finger, SWIM-type containing 6 0.0835006
WWOX WW domain containing oxidoreductase 0.0761623
PCDH7 protocadherin 7 0.0756888
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0725534
VMP1 vacuole membrane protein 1 0.0717009
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.070847
ANKRD12 ankyrin repeat domain 12 0.0705341
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0668668
RPS6 ribosomal protein S6 0.0654027
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0652581
TPM3 tropomyosin 3 0.0640206
RPS12 ribosomal protein S12 0.0638527
TMSB10 thymosin beta 10 0.0607546
ASPH aspartate beta-hydroxylase 0.0597573
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0586165
JMJD1C jumonji domain containing 1C 0.0567957
TENM3 teneurin transmembrane protein 3 0.0558128
PDE4D phosphodiesterase 4D, cAMP-specific 0.0557141
ADIPOR2 adiponectin receptor 2 0.0546467
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0544225
LRMDA leucine rich melanocyte differentiation associated 0.0529859
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0528408
SMC4 structural maintenance of chromosomes 4 0.0523154
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0520393
ZNF638 zinc finger protein 638 0.0513093
NEGR1 neuronal growth regulator 1 0.0512026
PRELID2 PRELI domain containing 2 0.0507065
IPO7 importin 7 0.0499016
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.049634
FTL ferritin, light polypeptide 0.0490215
TPI1 triosephosphate isomerase 1 0.0488181
TAS2R14 taste receptor, type 2, member 14 0.0476016
HELLS helicase, lymphoid-specific 0.0463415
PCDH9 protocadherin 9 0.0445801
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.044344
HSPA8 heat shock 70kDa protein 8 0.04414
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0440601
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0437445
EPHA6 EPH receptor A6 0.0436222
RAD51B RAD51 paralog B 0.0432764
BRD2 bromodomain containing 2 0.0430232
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.042981
GOLGB1 golgin B1 0.042928
ZFAND3 zinc finger, AN1-type domain 3 0.042876
PCBP2 poly(rC) binding protein 2 0.0428645
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0426858
NHSL1 NHS-like 1 0.042319
INTS6 integrator complex subunit 6 0.0421015
SPATS2 spermatogenesis associated, serine-rich 2 0.0417029
MSRB3 methionine sulfoxide reductase B3 0.0414068
MBD5 methyl-CpG binding domain protein 5 0.040939
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0408981
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0408396
RPS19 ribosomal protein S19 0.0408305
PDGFC platelet derived growth factor C 0.0402045
MED13L mediator complex subunit 13-like 0.0398952
TBC1D5 TBC1 domain family, member 5 0.0398677
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0397064
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0392205
FNDC3B fibronectin type III domain containing 3B 0.0388453
ARL15 ADP-ribosylation factor-like 15 0.0384787
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0384739
PTMA prothymosin, alpha 0.0383498
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0377873
BABAM2 BRISC and BRCA1 A complex member 2 0.0372605
HDAC9 histone deacetylase 9 0.0370218
DIAPH3 diaphanous-related formin 3 0.0368575
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0368526
RPS8 ribosomal protein S8 0.036634
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0365955
LGALS12 lectin, galactoside-binding, soluble, 12 0.0362336
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0358682
APLP2 amyloid beta (A4) precursor-like protein 2 0.0356096
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0351759
MSH2 mutS homolog 2 0.0351292
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0349652
ARID1B AT rich interactive domain 1B (SWI1-like) 0.034922
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0345099
FUS FUS RNA binding protein 0.0343148
ASXL2 additional sex combs like transcriptional regulator 2 0.034054
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0338591
NEBL nebulette 0.0331931
PRIM2 primase, DNA, polypeptide 2 (58kDa) 0.0330614
FHIT fragile histidine triad 0.0330093
RIMS2 regulating synaptic membrane exocytosis 2 0.0329635
UHMK1 U2AF homology motif (UHM) kinase 1 0.0328083
CNRIP1 cannabinoid receptor interacting protein 1 0.0326161
NIPBL Nipped-B homolog (Drosophila) 0.0320793
FXR1 fragile X mental retardation, autosomal homolog 1 0.0320043
SMYD3 SET and MYND domain containing 3 0.0317297
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0315596
ATAD2 ATPase family, AAA domain containing 2 0.0315281

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0458499
LMO7 LIM domain 7 -0.042917
VIM vimentin -0.0416909
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0408361
CLDN1 claudin 1 -0.040523
MMP12 matrix metallopeptidase 12 -0.039451
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0393365
MYL12B myosin, light chain 12B, regulatory -0.0382946
SLC38A2 solute carrier family 38, member 2 -0.0375257
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0341059
KIF5B kinesin family member 5B -0.0323687
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0319778
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0305527
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0300027
RAD21 RAD21 homolog (S. pombe) -0.0293577
H1-0 H1.0 linker histone -0.0291712
IFIH1 interferon induced with helicase C domain 1 -0.028187
LARP1 La ribonucleoprotein domain family, member 1 -0.0269497
KLF6 Kruppel-like factor 6 -0.026651
CXADR coxsackie virus and adenovirus receptor -0.0265676
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0260828
TMEM123 transmembrane protein 123 -0.0254184
ZBTB20 zinc finger and BTB domain containing 20 -0.02409
BIRC6 baculoviral IAP repeat containing 6 -0.0229422
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0226612
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0226489
WDR43 WD repeat domain 43 -0.0221578
ANXA1 annexin A1 -0.0214562
ZNF217 zinc finger protein 217 -0.0213374
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0213166
MARS1 methionyl-tRNA synthetase 1 -0.0208151
PGK1 phosphoglycerate kinase 1 -0.0208027
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0204394
GARS1 glycyl-tRNA synthetase 1 -0.0202025
KLHL24 kelch-like family member 24 -0.0201439
NCOR1 nuclear receptor corepressor 1 -0.0198011
CDK17 cyclin-dependent kinase 17 -0.0197257
RSL1D1 ribosomal L1 domain containing 1 -0.0191256
LOC112694756 uncharaterized LOC112694756 -0.0187857
WDR45B WD repeat domain 45B -0.0187414
CENPE centromere protein E, 312kDa -0.0181341
BCHE butyrylcholinesterase -0.0176684
KPNB1 karyopherin (importin) beta 1 -0.0176484
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0176042
CCNG1 cyclin G1 -0.0174876
CENPF centromere protein F, 350/400kDa -0.0172944
BLTP2 bridge-like lipid transfer protein family member 2 -0.0172155
THOC2 THO complex 2 -0.0170697
GASK1B golgi associated kinase 1B -0.0169688
PRR11 proline rich 11 -0.0167934
AHNAK AHNAK nucleoprotein -0.0166731
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0165543
NABP1 nucleic acid binding protein 1 -0.0163567
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 -0.0161641
HMGA1 high mobility group AT-hook 1 -0.0160684
DPYD dihydropyrimidine dehydrogenase -0.0159201
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0158803
ACTG1 actin gamma 1 -0.015824
S100A6 S100 calcium binding protein A6 -0.0158047
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0156539
TM4SF1 transmembrane 4 L six family member 1 -0.0156305
NIPSNAP2 nipsnap homolog 2 -0.0155238
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0153047
TMEM131 transmembrane protein 131 -0.0151734
WASF2 WAS protein family, member 2 -0.0151271
BIRC2 baculoviral IAP repeat containing 2 -0.014894
DLC1 DLC1 Rho GTPase activating protein -0.0147213
SLC38A1 solute carrier family 38, member 1 -0.014687
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0146277
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0143449
TGIF1 TGFB-induced factor homeobox 1 -0.0143093
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0142425
NDFIP1 Nedd4 family interacting protein 1 -0.0142307
RPS24 ribosomal protein S24 -0.0142233
RPL6 ribosomal protein L6 -0.0141517
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B -0.0140809
KDM3A lysine (K)-specific demethylase 3A -0.0139325
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0139125
LARS1 leucyl-tRNA synthetase 1 -0.0137334
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0134944
GM2A GM2 ganglioside activator -0.0133542
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.013296
SINHCAF SIN3-HDAC complex associated factor -0.0132334
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0130769
FOXK2 forkhead box K2 -0.0130394
TXNRD1 thioredoxin reductase 1 -0.0128478
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0127354
TSC22D2 TSC22 domain family, member 2 -0.0127342
NPEPPS aminopeptidase puromycin sensitive -0.012718
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0125225
URI1 URI1, prefoldin-like chaperone -0.0124346
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0122484
IPMK inositol polyphosphate multikinase -0.0122258
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0122031
ARHGAP12 Rho GTPase activating protein 12 -0.0121564
NEK7 NIMA-related kinase 7 -0.0120139
ZFP64 ZFP64 zinc finger protein -0.0119679
GNS glucosamine (N-acetyl)-6-sulfatase -0.0119398
EDN1 endothelin 1 -0.0119063
TUBB tubulin, beta class I -0.0117769