Irinotecan_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.212026
SAMD4A sterile alpha motif domain containing 4A 0.117626
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.11236
SVIL supervillin 0.102495
ASPH aspartate beta-hydroxylase 0.0908404
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0880845
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0825156
IGFBP1 insulin-like growth factor binding protein 1 0.0811059
ATXN1 ataxin 1 0.0798893
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0791087
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0790411
DSPP dentin sialophosphoprotein 0.0633563
EHBP1 EH domain binding protein 1 0.0626682
GPC6 glypican 6 0.0616784
ERRFI1 ERBB receptor feedback inhibitor 1 0.0596778
FAM107B family with sequence similarity 107, member B 0.0585312
PDLIM5 PDZ and LIM domain 5 0.0579442
EXT1 exostosin glycosyltransferase 1 0.0569773
SPTBN1 spectrin, beta, non-erythrocytic 1 0.05438
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0470902
DST dystonin 0.0462878
TRIO trio Rho guanine nucleotide exchange factor 0.0415219
FRMD5 FERM domain containing 5 0.0406897
LPP LIM domain containing preferred translocation partner in lipoma 0.0400222
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0387522
KYNU kynureninase 0.0381225
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0365336
GRB10 growth factor receptor-bound protein 10 0.0365033
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0353776
MACF1 microtubule-actin crosslinking factor 1 0.0342438
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0331059
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0319889
VCL vinculin 0.031679
ZBTB20 zinc finger and BTB domain containing 20 0.0315721
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0291603
FAT1 FAT atypical cadherin 1 0.0291427
RAD51B RAD51 paralog B 0.028263
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0282255
FOXP1 forkhead box P1 0.0280796
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0279653
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0276806
LRMDA leucine rich melanocyte differentiation associated 0.0275317
PLXDC2 plexin domain containing 2 0.027481
NDRG1 N-myc downstream regulated 1 0.0273803
TBC1D22A TBC1 domain family, member 22A 0.0255392
RAI14 retinoic acid induced 14 0.0251517
KIAA1217 KIAA1217 0.023757
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0237488
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0236854
MYH9 myosin, heavy chain 9, non-muscle 0.0233926
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0233772
FN1 fibronectin 1 0.0230292
MBNL2 muscleblind-like splicing regulator 2 0.0228499
RASA2 RAS p21 protein activator 2 0.0225913
PAWR PRKC, apoptosis, WT1, regulator 0.0223807
DTNA dystrobrevin, alpha 0.022353
AHNAK AHNAK nucleoprotein 0.022091
ANO6 anoctamin 6 0.0215147
MYO1E myosin IE 0.0214611
MALRD1 MAM and LDL receptor class A domain containing 1 0.0214384
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0212673
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0208083
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0207723
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.020754
LMO7 LIM domain 7 0.0195559
GCLC glutamate-cysteine ligase, catalytic subunit 0.0195369
CRY1 cryptochrome circadian clock 1 0.0194742
FLNB filamin B, beta 0.0194049
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0189997
MAML2 mastermind-like 2 (Drosophila) 0.018827
ITGA6 integrin, alpha 6 0.0187569
GMDS GDP-mannose 4,6-dehydratase 0.0186753
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.018316
ITGAV integrin, alpha V 0.0182357
DOCK4 dedicator of cytokinesis 4 0.0182349
NPAS2 neuronal PAS domain protein 2 0.0181275
SMAD3 SMAD family member 3 0.017778
ARFGEF3 ARFGEF family member 3 0.0177318
RUNX1 runt-related transcription factor 1 0.0175307
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0174894
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.017437
HPCAL1 hippocalcin-like 1 0.0171989
SMYD3 SET and MYND domain containing 3 0.0170437
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0169776
MBNL1 muscleblind-like splicing regulator 1 0.0167384
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0166677
KDM4C lysine (K)-specific demethylase 4C 0.0163866
KALRN kalirin, RhoGEF kinase 0.0163376
GOLGB1 golgin B1 0.0163359
DUSP16 dual specificity phosphatase 16 0.0162534
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0162229
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0162193
DNAH17 dynein, axonemal, heavy chain 17 0.0159242
TXNRD1 thioredoxin reductase 1 0.0156301
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0154204
PALLD palladin, cytoskeletal associated protein 0.015297
FAM13A family with sequence similarity 13, member A 0.0152447
KRT23 keratin 23, type I 0.0150709
CLIC4 chloride intracellular channel 4 0.0150046
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0148746

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.300451
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.159184
C3 complement component 3 -0.148277
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.128334
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.110237
APOA2 apolipoprotein A-II -0.0810749
APOB apolipoprotein B -0.0748698
RPS6 ribosomal protein S6 -0.0563466
EML4 echinoderm microtubule associated protein like 4 -0.0540481
FTL ferritin, light polypeptide -0.0536716
RPL11 ribosomal protein L11 -0.0506533
GPC3 glypican 3 -0.0474913
RPS12 ribosomal protein S12 -0.0469836
RPL37A ribosomal protein L37a -0.0467786
TPT1 tumor protein, translationally-controlled 1 -0.0467091
AHSG alpha-2-HS-glycoprotein -0.0455153
FBF1 Fas (TNFRSF6) binding factor 1 -0.0449652
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0444648
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0429957
TF transferrin -0.0407998
LYZ lysozyme -0.0398175
RPS8 ribosomal protein S8 -0.0370528
RPL35A ribosomal protein L35a -0.0366343
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0363679
RPS3 ribosomal protein S3 -0.0362516
APOE apolipoprotein E -0.0360993
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0360756
CPE carboxypeptidase E -0.035235
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0348791
RPS24 ribosomal protein S24 -0.0335221
RPL31 ribosomal protein L31 -0.0332722
A2M alpha-2-macroglobulin -0.0324038
TRIM26 tripartite motif containing 26 -0.0322265
RPLP1 ribosomal protein, large, P1 -0.0321409
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.031935
TMEM123 transmembrane protein 123 -0.0313534
PCBP2 poly(rC) binding protein 2 -0.0299295
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0294442
EGR1 early growth response 1 -0.029323
PTCHD4 patched domain containing 4 -0.0291
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0289801
GDF15 growth differentiation factor 15 -0.0285441
RPS19 ribosomal protein S19 -0.0284803
RPS29 ribosomal protein S29 -0.0280786
PTPRM protein tyrosine phosphatase, receptor type, M -0.0278748
APOA1 apolipoprotein A-I -0.0277374
PERP PERP, TP53 apoptosis effector -0.0276466
RPS27A ribosomal protein S27a -0.0271305
HMGA1 high mobility group AT-hook 1 -0.0263728
RBM25 RNA binding motif protein 25 -0.0261871
APOH apolipoprotein H (beta-2-glycoprotein I) -0.0260075
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0256289
RPL9 ribosomal protein L9 -0.0253203
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0251879
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0247962
TM4SF1 transmembrane 4 L six family member 1 -0.0240647
PTMA prothymosin, alpha -0.0238795
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0236679
RPS13 ribosomal protein S13 -0.023517
RPS25 ribosomal protein S25 -0.0227757
RPLP0 ribosomal protein, large, P0 -0.0226809
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0226734
AMBP alpha-1-microglobulin/bikunin precursor -0.0225567
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0225154
RPS23 ribosomal protein S23 -0.022174
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0220167
RPL26 ribosomal protein L26 -0.0219956
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0217191
GNAS GNAS complex locus -0.0217185
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0216171
CYB5R3 cytochrome b5 reductase 3 -0.0214739
PEG10 paternally expressed 10 -0.0213071
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0211632
PTBP3 polypyrimidine tract binding protein 3 -0.0211097
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0210715
KIF5B kinesin family member 5B -0.02078
RBM39 RNA binding motif protein 39 -0.020675
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0203696
CST3 cystatin C -0.0203056
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0202928
SELENOP selenoprotein P -0.0201805
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0201439
RPS21 ribosomal protein S21 -0.0199112
SLC38A2 solute carrier family 38, member 2 -0.0198249
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0197554
RPL28 ribosomal protein L28 -0.019524
NAP1L1 nucleosome assembly protein 1-like 1 -0.0194917
NKD1 naked cuticle homolog 1 (Drosophila) -0.0193291
RPLP2 ribosomal protein, large, P2 -0.0192805
RPL12 ribosomal protein L12 -0.0192488
CFB complement factor B -0.0192199
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.019209
RPL23 ribosomal protein L23 -0.0189698
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0187492
EPAS1 endothelial PAS domain protein 1 -0.0186533
SESTD1 SEC14 and spectrin domains 1 -0.0182586
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0180907
VDAC1 voltage-dependent anion channel 1 -0.0178315
RPL37 ribosomal protein L37 -0.0175265
CP ceruloplasmin (ferroxidase) -0.0173348