Irinotecan_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.154194
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.135507
GDA guanine deaminase 0.087352
MCU mitochondrial calcium uniporter 0.0695571
PTPRK protein tyrosine phosphatase, receptor type, K 0.0671212
MYO1E myosin IE 0.0621074
RRM2 ribonucleotide reductase M2 0.0595425
UBASH3B ubiquitin associated and SH3 domain containing B 0.0561666
FGFR2 fibroblast growth factor receptor 2 0.0522601
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0488904
ZSWIM6 zinc finger, SWIM-type containing 6 0.0454843
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0451844
AHR aryl hydrocarbon receptor 0.0440987
EFNA5 ephrin-A5 0.0438399
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0431772
MYOF myoferlin 0.0431315
HSPA8 heat shock 70kDa protein 8 0.0404967
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0400824
EMP1 epithelial membrane protein 1 0.0391438
EPS8 epidermal growth factor receptor pathway substrate 8 0.0379419
SMAD3 SMAD family member 3 0.036828
RASEF RAS and EF-hand domain containing 0.0367262
MBNL2 muscleblind-like splicing regulator 2 0.0352675
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0351117
MAML2 mastermind-like 2 (Drosophila) 0.0348664
HDAC9 histone deacetylase 9 0.0346022
NCEH1 neutral cholesterol ester hydrolase 1 0.0344903
CATSPERB catsper channel auxiliary subunit beta 0.0340808
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0338508
INTS6 integrator complex subunit 6 0.0335881
OSBPL10 oxysterol binding protein-like 10 0.0323044
APLP2 amyloid beta (A4) precursor-like protein 2 0.0320531
ANXA1 annexin A1 0.0319068
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.031814
MECOM MDS1 and EVI1 complex locus 0.0314547
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0313263
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0308964
RPS12 ribosomal protein S12 0.0305837
SIK3 SIK family kinase 3 0.0300349
DST dystonin 0.0298269
PDLIM5 PDZ and LIM domain 5 0.0297968
SH3RF1 SH3 domain containing ring finger 1 0.0296683
CARMIL1 capping protein regulator and myosin 1 linker 1 0.0294372
EFNB2 ephrin-B2 0.0289301
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.028847
ASPH aspartate beta-hydroxylase 0.0282868
BAIAP2L1 BAI1-associated protein 2-like 1 0.0282141
ALCAM activated leukocyte cell adhesion molecule 0.0280839
SLC38A2 solute carrier family 38, member 2 0.0280186
TNIK TRAF2 and NCK interacting kinase 0.0278289
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0277786
MARCHF3 membrane associated ring-CH-type finger 3 0.0275129
RPL37A ribosomal protein L37a 0.0274246
RBM47 RNA binding motif protein 47 0.0271598
SMC1A structural maintenance of chromosomes 1A 0.0270757
CTBP2 C-terminal binding protein 2 0.0269662
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0266237
MKI67 marker of proliferation Ki-67 0.026468
POF1B premature ovarian failure, 1B 0.025993
MBNL1 muscleblind-like splicing regulator 1 0.0251067
EXPH5 exophilin 5 0.0249279
MUC13 mucin 13, cell surface associated 0.0246418
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0236818
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0233947
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0233453
ATAD2 ATPase family, AAA domain containing 2 0.023058
ARHGAP21 Rho GTPase activating protein 21 0.0226931
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0225806
NFIB nuclear factor I/B 0.0224142
SGMS2 sphingomyelin synthase 2 0.0223392
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0223001
ZFP36L2 ZFP36 ring finger protein-like 2 0.0219733
SH3D19 SH3 domain containing 19 0.0219718
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0219441
IFI6 interferon, alpha-inducible protein 6 0.0218752
TJP1 tight junction protein 1 0.0217628
SEPTIN9 septin 9 0.0213911
FRMD5 FERM domain containing 5 0.0213086
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.020869
FAF1 Fas (TNFRSF6) associated factor 1 0.0206245
AKAP13 A kinase (PRKA) anchor protein 13 0.0205758
RPS6 ribosomal protein S6 0.0203931
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0203531
RPS3 ribosomal protein S3 0.0203134
CAPN8 calpain 8 0.0198994
TPM3 tropomyosin 3 0.0197994
PRSS3 protease, serine, 3 0.0195721
ECT2 epithelial cell transforming 2 0.0195519
SERINC5 serine incorporator 5 0.0194369
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0193773
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0193749
TLE4 transducin-like enhancer of split 4 0.0189563
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0189473
NOP56 NOP56 ribonucleoprotein 0.0188337
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0183848
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.0182627
TOX3 TOX high mobility group box family member 3 0.0182566
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0181017
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0180553
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0180477

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.200502
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.193066
GMDS GDP-mannose 4,6-dehydratase -0.0894812
H1-0 H1.0 linker histone -0.0850209
PDIA3 protein disulfide isomerase family A, member 3 -0.0805569
NPSR1 neuropeptide S receptor 1 -0.0770083
GOLGA4 golgin A4 -0.0765713
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0740504
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0731331
PGK1 phosphoglycerate kinase 1 -0.069785
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0648972
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0611766
NDRG1 N-myc downstream regulated 1 -0.0605539
GARS1 glycyl-tRNA synthetase 1 -0.0585217
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0555837
PDIA4 protein disulfide isomerase family A, member 4 -0.0544568
WDR45B WD repeat domain 45B -0.0530705
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.052222
TMEM123 transmembrane protein 123 -0.0506298
ATF5 activating transcription factor 5 -0.0503099
ITGB4 integrin, beta 4 -0.0502147
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0495274
KRT18 keratin 18, type I -0.0490498
AGR2 anterior gradient 2 -0.0478935
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.046376
AKAP9 A kinase (PRKA) anchor protein 9 -0.0460274
RRBP1 ribosome binding protein 1 -0.0454806
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0438581
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0421393
LOC112694756 uncharaterized LOC112694756 -0.0398047
CANX calnexin -0.0397764
BIRC6 baculoviral IAP repeat containing 6 -0.0388907
ZNF292 zinc finger protein 292 -0.0385444
IARS1 isoleucyl-tRNA synthetase 1 -0.0382862
FAT1 FAT atypical cadherin 1 -0.0378602
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0376867
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0376598
S100A6 S100 calcium binding protein A6 -0.0376583
HYOU1 hypoxia up-regulated 1 -0.0374846
KDM3A lysine (K)-specific demethylase 3A -0.0367473
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0362922
HM13 histocompatibility (minor) 13 -0.0361677
RSF1 remodeling and spacing factor 1 -0.0352557
ANKRD11 ankyrin repeat domain 11 -0.0350328
CD46 CD46 molecule, complement regulatory protein -0.0340987
SAMD12 sterile alpha motif domain containing 12 -0.0336264
ESRP1 epithelial splicing regulatory protein 1 -0.033586
CLTC clathrin, heavy chain (Hc) -0.0331714
FTL ferritin, light polypeptide -0.0329817
ANXA2 annexin A2 -0.0329436
EIF1 eukaryotic translation initiation factor 1 -0.0324945
CD2AP CD2-associated protein -0.0322711
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0322037
TPM4 tropomyosin 4 -0.0315094
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0309288
TMSB10 thymosin beta 10 -0.0300452
NCOR1 nuclear receptor corepressor 1 -0.0296528
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0291875
AVL9 AVL9 homolog (S. cerevisiase) -0.029146
SPAG9 sperm associated antigen 9 -0.029089
RAB6A RAB6A, member RAS oncogene family -0.0290873
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0290134
KMT2C lysine (K)-specific methyltransferase 2C -0.0289553
RAB2A RAB2A, member RAS oncogene family -0.0286971
COG5 component of oligomeric golgi complex 5 -0.0285534
NPEPPS aminopeptidase puromycin sensitive -0.0284924
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0278179
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0277817
CLINT1 clathrin interactor 1 -0.0275809
MUC17 mucin 17, cell surface associated -0.0273098
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0272879
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.027286
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0272732
RAB1A RAB1A, member RAS oncogene family -0.0272677
VEGFA vascular endothelial growth factor A -0.0267679
PDIA6 protein disulfide isomerase family A, member 6 -0.0267458
KDM2A lysine (K)-specific demethylase 2A -0.0266663
SLC38A1 solute carrier family 38, member 1 -0.0266273
RBM39 RNA binding motif protein 39 -0.0265976
HMGA1 high mobility group AT-hook 1 -0.0264455
NCOR2 nuclear receptor corepressor 2 -0.0263112
CALR calreticulin -0.0262561
WASF2 WAS protein family, member 2 -0.0262234
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0261619
ARCN1 archain 1 -0.0260692
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0258949
POTEF POTE ankyrin domain family, member F -0.0258188
LMAN1 lectin, mannose-binding, 1 -0.0258158
B2M beta-2-microglobulin -0.0257908
PRRC2B proline-rich coiled-coil 2B -0.0257496
SLC31A1 solute carrier family 31 (copper transporter), member 1 -0.0255979
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0254353
NF1 neurofibromin 1 -0.0253382
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0252834
FAM13A family with sequence similarity 13, member A -0.0251314
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0251056
ZMYND8 zinc finger, MYND-type containing 8 -0.0251007
HDLBP high density lipoprotein binding protein -0.0246435
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0246263
TPD52 tumor protein D52 -0.0245931