Irinotecan_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.148779
EXT1 exostosin glycosyltransferase 1 0.0606293
HSPA8 heat shock 70kDa protein 8 0.0510257
MYO1E myosin IE 0.0508797
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0486681
RPS12 ribosomal protein S12 0.0462371
RPS6 ribosomal protein S6 0.0415045
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.038646
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0376303
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0365913
LMO7 LIM domain 7 0.034369
PDE4D phosphodiesterase 4D, cAMP-specific 0.0333558
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0319611
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0313707
MARCHF3 membrane associated ring-CH-type finger 3 0.0311236
RPS2 ribosomal protein S2 0.0289343
ZSWIM6 zinc finger, SWIM-type containing 6 0.0281766
RPS8 ribosomal protein S8 0.0277259
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0268938
AFF1 AF4/FMR2 family, member 1 0.026701
EGFR epidermal growth factor receptor 0.0254111
LURAP1L leucine rich adaptor protein 1-like 0.0247353
PTPRK protein tyrosine phosphatase, receptor type, K 0.0239459
POF1B premature ovarian failure, 1B 0.0239214
PDZD8 PDZ domain containing 8 0.0238465
MUC13 mucin 13, cell surface associated 0.0238436
TGFBR3 transforming growth factor, beta receptor III 0.0231097
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0223489
UNC13B unc-13 homolog B (C. elegans) 0.0217872
MBNL1 muscleblind-like splicing regulator 1 0.0214567
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0213435
PARD3B par-3 family cell polarity regulator beta 0.0206365
TPT1 tumor protein, translationally-controlled 1 0.0205844
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0205573
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0204608
CATSPERB catsper channel auxiliary subunit beta 0.0199829
AEBP2 AE binding protein 2 0.0196767
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.019593
SIK3 SIK family kinase 3 0.0193606
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0187902
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.018409
SMAD2 SMAD family member 2 0.0183694
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0180071
DUSP16 dual specificity phosphatase 16 0.017794
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0177143
INTS6 integrator complex subunit 6 0.0170929
PDLIM5 PDZ and LIM domain 5 0.0167529
SAMD4A sterile alpha motif domain containing 4A 0.016716
RPL37A ribosomal protein L37a 0.0164055
FOXP1 forkhead box P1 0.0161496
ADGRV1 adhesion G protein-coupled receptor V1 0.0159622
PSD3 pleckstrin and Sec7 domain containing 3 0.0158041
RPS17 ribosomal protein S17 0.0154666
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.014823
ARHGAP42 Rho GTPase activating protein 42 0.0147785
PTPRG protein tyrosine phosphatase, receptor type, G 0.0146845
WWOX WW domain containing oxidoreductase 0.0142957
CLCN3 chloride channel, voltage-sensitive 3 0.0141275
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0139156
NCEH1 neutral cholesterol ester hydrolase 1 0.0138073
LOC102724023 ES1 protein homolog, mitochondrial 0.0138005
CEMIP2 cell migration inducing hyaluronidase 2 0.0137695
TRAPPC9 trafficking protein particle complex 9 0.0136564
ASPH aspartate beta-hydroxylase 0.0136561
GDA guanine deaminase 0.0136335
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0135011
NEBL nebulette 0.0134747
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.013438
BBS9 Bardet-Biedl syndrome 9 0.0133746
PDE10A phosphodiesterase 10A 0.0132827
RPL3 ribosomal protein L3 0.0131804
MT2A metallothionein 2A 0.0131356
SOX9 SRY (sex determining region Y)-box 9 0.0131325
HNF4G hepatocyte nuclear factor 4, gamma 0.0129824
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0129048
PCNX2 pecanex 2 0.0128475
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0128306
DST dystonin 0.0127539
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0123123
CEP128 centrosomal protein 128kDa 0.0121086
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0120895
EPHA4 EPH receptor A4 0.0119528
B2M beta-2-microglobulin 0.0118907
ADARB1 adenosine deaminase, RNA-specific, B1 0.0118337
WNT2B wingless-type MMTV integration site family, member 2B 0.0118242
CENPP centromere protein P 0.0117987
NABP1 nucleic acid binding protein 1 0.0117094
RPL9 ribosomal protein L9 0.0116839
RND3 Rho family GTPase 3 0.0116287
SVIL supervillin 0.0116048
CFAP44 cilia and flagella associated protein 44 0.0115823
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 0.0115209
SGMS2 sphingomyelin synthase 2 0.0114625
SLC38A2 solute carrier family 38, member 2 0.0114314
PRKCSH protein kinase C substrate 80K-H 0.0113833
SEPTIN9 septin 9 0.0112258
ZBTB20 zinc finger and BTB domain containing 20 0.0111643
CRY1 cryptochrome circadian clock 1 0.0111415
LAMA4 laminin, alpha 4 0.0110822
OSBPL10 oxysterol binding protein-like 10 0.0109414

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.191076
PTMA prothymosin, alpha -0.189097
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.161434
MUC6 mucin 6, oligomeric mucus/gel-forming -0.149463
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.142218
TMSB10 thymosin beta 10 -0.130394
ANXA2 annexin A2 -0.116063
NPSR1 neuropeptide S receptor 1 -0.1129
NDRG1 N-myc downstream regulated 1 -0.100483
FLNB filamin B, beta -0.0903811
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0865407
GOLGA4 golgin A4 -0.0766844
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0763966
TNS4 tensin 4 -0.0721135
NALF1 NALCN channel auxiliary factor 1 -0.0711437
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0707529
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0707083
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0657933
TXNIP thioredoxin interacting protein -0.0651193
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.063535
FAM13A family with sequence similarity 13, member A -0.0628915
NCOR1 nuclear receptor corepressor 1 -0.0620743
LDHA lactate dehydrogenase A -0.0619301
PGK1 phosphoglycerate kinase 1 -0.0618582
ESYT2 extended synaptotagmin-like protein 2 -0.0606382
PIGR polymeric immunoglobulin receptor -0.0601306
ITGA6 integrin, alpha 6 -0.0589547
FTH1 ferritin, heavy polypeptide 1 -0.0587331
EZR ezrin -0.0575528
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0545653
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0542195
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0529902
BIRC6 baculoviral IAP repeat containing 6 -0.0528833
PPARG peroxisome proliferator-activated receptor gamma -0.0518588
KRT18 keratin 18, type I -0.0518507
HMGA1 high mobility group AT-hook 1 -0.0517919
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0516601
ACTN4 actinin, alpha 4 -0.0507042
CALB1 calbindin 1, 28kDa -0.0499386
S100A6 S100 calcium binding protein A6 -0.0486244
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0485907
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0482336
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0482188
ITGB4 integrin, beta 4 -0.0477425
SETD5 SET domain containing 5 -0.0475054
WDR45B WD repeat domain 45B -0.04745
ZFAND3 zinc finger, AN1-type domain 3 -0.0469402
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.046878
TPM4 tropomyosin 4 -0.0467188
RNF145 ring finger protein 145 -0.0456861
GREB1L growth regulation by estrogen in breast cancer-like -0.0455832
GPHN gephyrin -0.0455611
RAB1A RAB1A, member RAS oncogene family -0.0440424
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0439498
CANX calnexin -0.0435343
FERMT1 fermitin family member 1 -0.0433866
MUC17 mucin 17, cell surface associated -0.042521
H1-0 H1.0 linker histone -0.0424017
ENO1 enolase 1, (alpha) -0.0422652
EPCAM epithelial cell adhesion molecule -0.0422128
IARS1 isoleucyl-tRNA synthetase 1 -0.042083
MED13L mediator complex subunit 13-like -0.0419639
CEMIP cell migration inducing protein, hyaluronan binding -0.0409945
MLEC malectin -0.0408332
EREG epiregulin -0.0405321
FNBP1L formin binding protein 1-like -0.0403835
LOC112694756 uncharaterized LOC112694756 -0.0401154
GCC2 GRIP and coiled-coil domain containing 2 -0.0381404
EEF2 eukaryotic translation elongation factor 2 -0.0378839
PDIA3 protein disulfide isomerase family A, member 3 -0.0378786
ZNF292 zinc finger protein 292 -0.0378362
SEC31A SEC31 homolog A (S. cerevisiae) -0.0375909
GARS1 glycyl-tRNA synthetase 1 -0.0372913
PKM pyruvate kinase, muscle -0.0370928
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0367655
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0367118
CD46 CD46 molecule, complement regulatory protein -0.036457
KDM3A lysine (K)-specific demethylase 3A -0.0356119
CCNY cyclin Y -0.0354985
EXOC1 exocyst complex component 1 -0.0352374
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0351059
RAP1B RAP1B, member of RAS oncogene family -0.0350665
MON2 MON2 homolog (S. cerevisiae) -0.034908
USP3 ubiquitin specific peptidase 3 -0.0348332
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0342095
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0336094
MBNL2 muscleblind-like splicing regulator 2 -0.0335022
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0334526
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0332954
FOSL1 FOS-like antigen 1 -0.0332766
WASF2 WAS protein family, member 2 -0.0332736
KIF5B kinesin family member 5B -0.033069
RAB6A RAB6A, member RAS oncogene family -0.0330688
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0330478
RBM39 RNA binding motif protein 39 -0.0329633
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0329263
SREBF2 sterol regulatory element binding transcription factor 2 -0.0328819
DDIT4 DNA-damage-inducible transcript 4 -0.0327475
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0324743
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0323572