Irinotecan_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.205258
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.165533
PDE10A phosphodiesterase 10A 0.083537
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0773343
PM20D1 peptidase M20 domain containing 1 0.0705012
P3H2 prolyl 3-hydroxylase 2 0.0678073
RPS6 ribosomal protein S6 0.0607055
KYNU kynureninase 0.0590988
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0581211
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0577262
DST dystonin 0.056237
SMOC1 SPARC related modular calcium binding 1 0.0548096
PTPRM protein tyrosine phosphatase, receptor type, M 0.0494917
SMAD2 SMAD family member 2 0.0455553
PSD3 pleckstrin and Sec7 domain containing 3 0.044509
MAML3 mastermind-like 3 (Drosophila) 0.0403361
PRKN parkin RBR E3 ubiquitin protein ligase 0.0385549
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0378154
MAP7 microtubule-associated protein 7 0.0362278
RPS12 ribosomal protein S12 0.0358838
TPT1 tumor protein, translationally-controlled 1 0.0337531
RPL37A ribosomal protein L37a 0.0337502
RPS8 ribosomal protein S8 0.0335397
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0323811
PDE7B phosphodiesterase 7B 0.0315476
PDLIM5 PDZ and LIM domain 5 0.030273
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0295212
ANTXR1 anthrax toxin receptor 1 0.0273522
NALF1 NALCN channel auxiliary factor 1 0.0270305
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0269555
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0258503
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0258298
FMNL2 formin-like 2 0.0257936
DOCK4 dedicator of cytokinesis 4 0.0257726
PRELID2 PRELI domain containing 2 0.0255566
ZSWIM6 zinc finger, SWIM-type containing 6 0.0252378
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.025184
XYLT1 xylosyltransferase I 0.0251715
CHL1 cell adhesion molecule L1-like 0.0243551
COL4A5 collagen, type IV, alpha 5 0.0239608
COL8A1 collagen, type VIII, alpha 1 0.0238663
INTS6 integrator complex subunit 6 0.0232024
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0227986
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0227305
RAD51B RAD51 paralog B 0.0226659
DOCK5 dedicator of cytokinesis 5 0.0218863
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0217729
RPL31 ribosomal protein L31 0.0208479
AGTPBP1 ATP/GTP binding protein 1 0.0197204
RPS17 ribosomal protein S17 0.0190525
SH3KBP1 SH3-domain kinase binding protein 1 0.0190311
RPS2 ribosomal protein S2 0.0189794
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0188929
NRXN3 neurexin 3 0.0188878
CADM2 cell adhesion molecule 2 0.0188526
FNDC3A fibronectin type III domain containing 3A 0.0188507
EXT1 exostosin glycosyltransferase 1 0.0187473
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0185935
RPL9 ribosomal protein L9 0.0183255
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0180885
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0180537
FAM107B family with sequence similarity 107, member B 0.018027
DENND1A DENN/MADD domain containing 1A 0.0171534
RPS23 ribosomal protein S23 0.0171505
AUTS2 autism susceptibility candidate 2 0.0170775
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0168852
RPL26 ribosomal protein L26 0.0166581
FNIP1 folliculin interacting protein 1 0.0166236
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0165363
CTIF CBP80/20-dependent translation initiation factor 0.0164766
AEBP2 AE binding protein 2 0.0163937
CUX1 cut-like homeobox 1 0.0163451
RPS19 ribosomal protein S19 0.0158986
TTC28 tetratricopeptide repeat domain 28 0.0158415
SVIL supervillin 0.0156382
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.0155976
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0154974
ASCC3 activating signal cointegrator 1 complex subunit 3 0.015495
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0153402
KIAA0825 KIAA0825 0.015129
SQSTM1 sequestosome 1 0.0146518
RGS2 regulator of G-protein signaling 2 0.0145917
CDH13 cadherin 13 0.0145817
FBXL7 F-box and leucine-rich repeat protein 7 0.0145704
RPS3 ribosomal protein S3 0.0144668
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0142391
RPL37 ribosomal protein L37 0.0137384
PCDH15 protocadherin-related 15 0.0135795
DNAH14 dynein, axonemal, heavy chain 14 0.0133523
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0133054
EPHA4 EPH receptor A4 0.0131452
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0130732
GPHN gephyrin 0.0128369
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0127986
HSPA8 heat shock 70kDa protein 8 0.0126536
RPL7A ribosomal protein L7a 0.0126028
ATXN1 ataxin 1 0.0125692
RPL27 ribosomal protein L27 0.0125457
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0125153
RPS27 ribosomal protein S27 0.0125042

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.12866
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.125867
NAMPT nicotinamide phosphoribosyltransferase -0.122152
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0865224
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0807742
TXNRD1 thioredoxin reductase 1 -0.0741689
TMSB10 thymosin beta 10 -0.059348
ASPH aspartate beta-hydroxylase -0.0578705
TFPI2 tissue factor pathway inhibitor 2 -0.0542337
RTN4 reticulon 4 -0.0541893
TM4SF1 transmembrane 4 L six family member 1 -0.0509574
GDA guanine deaminase -0.0456358
CANX calnexin -0.0424468
NEK7 NIMA-related kinase 7 -0.0411409
PGK1 phosphoglycerate kinase 1 -0.0393665
EFNA5 ephrin-A5 -0.0371145
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0370675
TRIO trio Rho guanine nucleotide exchange factor -0.0365637
LIMCH1 LIM and calponin homology domains 1 -0.0365445
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0356271
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0341676
UBC ubiquitin C -0.0336816
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0332715
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.033019
PTMA prothymosin, alpha -0.0328517
OGA O-GlcNAcase -0.0323318
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0310403
TGFBI transforming growth factor, beta-induced, 68kDa -0.0309884
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0307723
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0307689
PRRC2C proline-rich coiled-coil 2C -0.0307507
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.029605
SPAG9 sperm associated antigen 9 -0.0293326
TNPO1 transportin 1 -0.0288449
VIM vimentin -0.0275032
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0273589
EEF2 eukaryotic translation elongation factor 2 -0.0270274
FLNB filamin B, beta -0.0264711
RAI1 retinoic acid induced 1 -0.0245761
PDIA3 protein disulfide isomerase family A, member 3 -0.0244934
AGFG1 ArfGAP with FG repeats 1 -0.0242815
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0241913
MYOF myoferlin -0.0237704
ENO1 enolase 1, (alpha) -0.0235934
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0235899
ENAH enabled homolog (Drosophila) -0.0235211
NAP1L1 nucleosome assembly protein 1-like 1 -0.0234284
LMAN1 lectin, mannose-binding, 1 -0.0233251
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0233014
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0228327
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0228241
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0226146
BIRC6 baculoviral IAP repeat containing 6 -0.0225865
SRGN serglycin -0.0225084
CD109 CD109 molecule -0.0222783
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0220661
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0215419
NRCAM neuronal cell adhesion molecule -0.021537
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0215347
LDHA lactate dehydrogenase A -0.0214552
PDGFA platelet-derived growth factor alpha polypeptide -0.021366
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0213604
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.020748
PTGR1 prostaglandin reductase 1 -0.0206833
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0206311
PDIA6 protein disulfide isomerase family A, member 6 -0.0204622
ELL2 elongation factor, RNA polymerase II, 2 -0.0201102
PCBP2 poly(rC) binding protein 2 -0.0198916
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0195689
AVL9 AVL9 homolog (S. cerevisiase) -0.0195197
ANKRD28 ankyrin repeat domain 28 -0.0195194
ATP13A3 ATPase type 13A3 -0.0193661
BMERB1 bMERB domain containing 1 -0.0192985
SAMD4A sterile alpha motif domain containing 4A -0.0192488
USP3 ubiquitin specific peptidase 3 -0.0191109
S100A6 S100 calcium binding protein A6 -0.0190519
GOLGA4 golgin A4 -0.0189925
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0188356
MFF mitochondrial fission factor -0.0187889
LOC112694756 uncharaterized LOC112694756 -0.0186981
NPAS2 neuronal PAS domain protein 2 -0.0185243
KMT2C lysine (K)-specific methyltransferase 2C -0.018452
CTSC cathepsin C -0.0184459
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0182362
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0182341
RBM39 RNA binding motif protein 39 -0.0177843
WDR45B WD repeat domain 45B -0.0175957
KPNB1 karyopherin (importin) beta 1 -0.017486
MAP1B microtubule-associated protein 1B -0.0171984
GARS1 glycyl-tRNA synthetase 1 -0.0171425
IGFBP3 insulin-like growth factor binding protein 3 -0.0168964
ARHGAP29 Rho GTPase activating protein 29 -0.0168066
CALU calumenin -0.0167863
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0166746
TM9SF3 transmembrane 9 superfamily member 3 -0.0162012
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0161538
ZFC3H1 zinc finger, C3H1-type containing -0.0160822
KDM3A lysine (K)-specific demethylase 3A -0.0159062
ADAM17 ADAM metallopeptidase domain 17 -0.0158098
NUP58 nucleoporin 58 -0.0157849