Irinotecan_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

119 genes differentially expressed following the Irinotecan_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.156297
DST dystonin 0.140016
SLC38A2 solute carrier family 38, member 2 0.131726
FLNB filamin B, beta 0.126789
TMSB10 thymosin beta 10 0.120929
PABPC1 poly(A) binding protein, cytoplasmic 1 0.120754
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.118517
SYT1 synaptotagmin I 0.114468
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.107524
MYO1E myosin IE 0.105561
CEMIP cell migration inducing protein, hyaluronan binding 0.102819
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0933959
ASPH aspartate beta-hydroxylase 0.0926775
OXSR1 oxidative stress responsive 1 0.0908643
FMN1 formin 1 0.0794744
COPA coatomer protein complex, subunit alpha 0.0788068
EXT1 exostosin glycosyltransferase 1 0.0786792
PARD3 par-3 family cell polarity regulator 0.0751639
MED13 mediator complex subunit 13 0.0734224
TOP1 topoisomerase (DNA) I 0.0707052
EZR ezrin 0.0705208
UBA6 ubiquitin-like modifier activating enzyme 6 0.0698019
RPS6 ribosomal protein S6 0.0696402
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0645126
FTL ferritin, light polypeptide 0.0639947
ERRFI1 ERBB receptor feedback inhibitor 1 0.0632299
ESYT2 extended synaptotagmin-like protein 2 0.0598148
NDRG1 N-myc downstream regulated 1 0.0580751
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0497985
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.049677
PSD3 pleckstrin and Sec7 domain containing 3 0.0489285
RPL37A ribosomal protein L37a 0.0468969
EFNA5 ephrin-A5 0.0465877
BPTF bromodomain PHD finger transcription factor 0.0463237
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0435359
ERBIN erbb2 interacting protein 0.0435027
PUM2 pumilio RNA-binding family member 2 0.0413768
ITGA6 integrin, alpha 6 0.0405065
AKAP12 A kinase (PRKA) anchor protein 12 0.0394714
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0393964
WWOX WW domain containing oxidoreductase 0.0385784
PRRC2C proline-rich coiled-coil 2C 0.0328773
TAS2R14 taste receptor, type 2, member 14 0.0327571
LMO7 LIM domain 7 0.0319479
TPT1 tumor protein, translationally-controlled 1 0.0312565
RPS12 ribosomal protein S12 0.0302763
NAP1L1 nucleosome assembly protein 1-like 1 0.0273814
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0272784
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.023612
COL5A2 collagen, type V, alpha 2 0.022843
CD44 CD44 molecule (Indian blood group) 0.0226401
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0185337
RPL35A ribosomal protein L35a 0.0165949
RNF213 ring finger protein 213 0.0154235
PTPRM protein tyrosine phosphatase, receptor type, M 0.0132155
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0123359
FNDC3B fibronectin type III domain containing 3B 0.0121855
TBC1D22A TBC1 domain family, member 22A 0.0112342
LDHA lactate dehydrogenase A 0.00834695
PDE4D phosphodiesterase 4D, cAMP-specific 0.00609623
RPS27A ribosomal protein S27a 0.00558857
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.00495085
GPC6 glypican 6 0.00152886
PTMA prothymosin, alpha 2.12034E-4

decreased expression

Symbol Name Standardized Value
LAMA4 laminin, alpha 4 -0.214935
FN1 fibronectin 1 -0.180749
EGFR epidermal growth factor receptor -0.162792
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.145062
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.14464
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.128758
CXCL8 chemokine (C-X-C motif) ligand 8 -0.120749
VIM vimentin -0.114042
SPAG9 sperm associated antigen 9 -0.113726
NKD1 naked cuticle homolog 1 (Drosophila) -0.108111
DSCAM Down syndrome cell adhesion molecule -0.106335
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.103926
ELL2 elongation factor, RNA polymerase II, 2 -0.10029
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0855058
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0811491
JARID2 jumonji, AT rich interactive domain 2 -0.0750448
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0743376
YBX3 Y box binding protein 3 -0.0725838
RPS3 ribosomal protein S3 -0.0714276
EIF1 eukaryotic translation initiation factor 1 -0.0701018
SBF2 SET binding factor 2 -0.0688859
SLTM SAFB-like, transcription modulator -0.0676615
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0674799
KTN1 kinectin 1 (kinesin receptor) -0.0647735
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0631131
USP34 ubiquitin specific peptidase 34 -0.0601753
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0536973
JMJD1C jumonji domain containing 1C -0.0534273
PDLIM5 PDZ and LIM domain 5 -0.0532725
PKM pyruvate kinase, muscle -0.0529958
MT2A metallothionein 2A -0.0506374
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0447073
RIGI RNA sensor RIG-I -0.0438707
PRKCA protein kinase C, alpha -0.0438113
PTK2 protein tyrosine kinase 2 -0.0414498
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0385363
COL6A3 collagen, type VI, alpha 3 -0.0356339
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0307806
RUNX1 runt-related transcription factor 1 -0.0273706
KMT2C lysine (K)-specific methyltransferase 2C -0.0229771
MYO6 myosin VI -0.0215761
TRIO trio Rho guanine nucleotide exchange factor -0.0206611
CNKSR3 CNKSR family member 3 -0.0205298
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0203767
KDM6A lysine (K)-specific demethylase 6A -0.0192943
RPLP1 ribosomal protein, large, P1 -0.017043
GARS1 glycyl-tRNA synthetase 1 -0.0144161
ZFAND3 zinc finger, AN1-type domain 3 -0.0129603
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0119188
TPM4 tropomyosin 4 -0.00935887
ANO6 anoctamin 6 -0.00887381
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.00771871
FMNL2 formin-like 2 -0.00132592
RPS8 ribosomal protein S8 -0.0010825
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -9.78108E-4