Irinotecan_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 0.149938
ASPH aspartate beta-hydroxylase 0.0976719
EXT1 exostosin glycosyltransferase 1 0.0912057
HMGA2 high mobility group AT-hook 2 0.075074
ZSWIM6 zinc finger, SWIM-type containing 6 0.0658246
GLIS3 GLIS family zinc finger 3 0.0643866
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0488935
INTS6 integrator complex subunit 6 0.0459949
AEBP2 AE binding protein 2 0.0443742
EFNA5 ephrin-A5 0.0441497
LIMCH1 LIM and calponin homology domains 1 0.0439396
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0398553
RAI14 retinoic acid induced 14 0.0386161
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0349053
VCL vinculin 0.0331891
RASAL2 RAS protein activator like 2 0.03237
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.032346
PALLD palladin, cytoskeletal associated protein 0.0309104
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0297858
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0295749
SLC35F3 solute carrier family 35, member F3 0.0295072
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0269462
SAMD4A sterile alpha motif domain containing 4A 0.0268356
LRMDA leucine rich melanocyte differentiation associated 0.0268123
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0258529
BICD1 bicaudal D homolog 1 (Drosophila) 0.0256003
LOXL2 lysyl oxidase-like 2 0.0247215
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0247122
TAS2R14 taste receptor, type 2, member 14 0.0245514
SYT1 synaptotagmin I 0.0245369
NTN4 netrin 4 0.0242143
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0241683
DNAH5 dynein, axonemal, heavy chain 5 0.0239325
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0238555
TMEM156 transmembrane protein 156 0.0233734
MAML2 mastermind-like 2 (Drosophila) 0.0233663
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0230582
HIPK2 homeodomain interacting protein kinase 2 0.0229774
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0221879
RANBP17 RAN binding protein 17 0.0221213
TRIO trio Rho guanine nucleotide exchange factor 0.0220331
SVIL supervillin 0.0218876
SFTPA2 surfactant protein A2 0.0216557
ATF6 activating transcription factor 6 0.0215137
IFI44L interferon-induced protein 44-like 0.0212867
STC2 stanniocalcin 2 0.0212798
AKAP12 A kinase (PRKA) anchor protein 12 0.0212295
TSHZ2 teashirt zinc finger homeobox 2 0.0207355
DST dystonin 0.0206657
RIGI RNA sensor RIG-I 0.0205493
SEPTIN9 septin 9 0.0198106
GOLGB1 golgin B1 0.0195653
DNAH14 dynein, axonemal, heavy chain 14 0.0194877
TNS3 tensin 3 0.0194795
PRKCA protein kinase C, alpha 0.0194644
ZBTB20 zinc finger and BTB domain containing 20 0.0191312
LTBP1 latent transforming growth factor beta binding protein 1 0.0191119
DUSP16 dual specificity phosphatase 16 0.0190757
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0190509
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0190441
EXOC4 exocyst complex component 4 0.0189849
CLIP2 CAP-GLY domain containing linker protein 2 0.018953
HSPA8 heat shock 70kDa protein 8 0.0188767
PDLIM5 PDZ and LIM domain 5 0.0186805
ABR active BCR-related 0.0186122
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0186091
ATXN1 ataxin 1 0.018477
ZC3H12C zinc finger CCCH-type containing 12C 0.0184514
RABGAP1L RAB GTPase activating protein 1-like 0.0180613
EGFR epidermal growth factor receptor 0.0180032
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0178941
CTBP2 C-terminal binding protein 2 0.017702
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.017687
VEGFC vascular endothelial growth factor C 0.0176119
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0176108
SMAD3 SMAD family member 3 0.0175999
DOCK1 dedicator of cytokinesis 1 0.0174873
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0173232
MCL1 myeloid cell leukemia 1 0.0169691
GPATCH2L G patch domain containing 2-like 0.0168376
NALF1 NALCN channel auxiliary factor 1 0.0167939
RAD51B RAD51 paralog B 0.0165887
EHBP1 EH domain binding protein 1 0.016571
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0165238
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0163299
NBEA neurobeachin 0.0161973
MLPH melanophilin 0.0161623
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.0161613
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.016126
SOX5 SRY (sex determining region Y)-box 5 0.0161142
UBASH3B ubiquitin associated and SH3 domain containing B 0.0160178
NPAS2 neuronal PAS domain protein 2 0.016016
CCDC138 coiled-coil domain containing 138 0.0160128
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0159519
CUX1 cut-like homeobox 1 0.015927
AHNAK AHNAK nucleoprotein 0.0158537
OXR1 oxidation resistance 1 0.0158326
AHRR aryl-hydrocarbon receptor repressor 0.0158303
NXN nucleoredoxin 0.0157052
FBN1 fibrillin 1 0.0156992

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.367356
NAMPT nicotinamide phosphoribosyltransferase -0.129492
MT2A metallothionein 2A -0.109263
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.108121
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0958661
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0948527
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0918451
FTH1 ferritin, heavy polypeptide 1 -0.0840119
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0828321
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0764772
PTMA prothymosin, alpha -0.0763531
NDRG1 N-myc downstream regulated 1 -0.0744429
VIM vimentin -0.0744375
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0718695
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0682588
FTL ferritin, light polypeptide -0.0621002
HILPDA hypoxia inducible lipid droplet-associated -0.0613705
CANX calnexin -0.0536034
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0494988
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0494269
ACBD3 acyl-CoA binding domain containing 3 -0.0480463
RNF145 ring finger protein 145 -0.0480245
ZNF292 zinc finger protein 292 -0.0473946
RTN4 reticulon 4 -0.0473202
WDR45B WD repeat domain 45B -0.0458985
SEPTIN7 septin 7 -0.0439091
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0436644
CD109 CD109 molecule -0.0423596
SPAG9 sperm associated antigen 9 -0.0407134
NUP58 nucleoporin 58 -0.0406502
TFG TRK-fused gene -0.0401587
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0399107
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0393288
HELZ helicase with zinc finger -0.0391692
PRRC2C proline-rich coiled-coil 2C -0.0391319
TMSB10 thymosin beta 10 -0.0390863
S100A6 S100 calcium binding protein A6 -0.039076
OGA O-GlcNAcase -0.0386914
WAC WW domain containing adaptor with coiled-coil -0.038534
UGCG UDP-glucose ceramide glucosyltransferase -0.0380925
RPS6 ribosomal protein S6 -0.0379806
RBM39 RNA binding motif protein 39 -0.0379756
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0372465
KMT2E lysine (K)-specific methyltransferase 2E -0.0369523
PGK1 phosphoglycerate kinase 1 -0.0366806
COPA coatomer protein complex, subunit alpha -0.0364188
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0360632
KDM5B lysine (K)-specific demethylase 5B -0.0357435
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.035484
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0350337
TM9SF3 transmembrane 9 superfamily member 3 -0.0349258
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0347908
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0344294
NPEPPS aminopeptidase puromycin sensitive -0.0325842
CENPF centromere protein F, 350/400kDa -0.0321375
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0318209
RAB1A RAB1A, member RAS oncogene family -0.0317919
PCBP2 poly(rC) binding protein 2 -0.0313822
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0313411
KMT2C lysine (K)-specific methyltransferase 2C -0.031125
NEK7 NIMA-related kinase 7 -0.0309579
BIRC6 baculoviral IAP repeat containing 6 -0.0308425
NAP1L1 nucleosome assembly protein 1-like 1 -0.0308315
GOLGA4 golgin A4 -0.0307682
SOD2 superoxide dismutase 2, mitochondrial -0.030701
RAB6A RAB6A, member RAS oncogene family -0.0304887
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0303787
PKM pyruvate kinase, muscle -0.0300596
MARCHF6 membrane associated ring-CH-type finger 6 -0.0297238
RNF24 ring finger protein 24 -0.029576
MIS18BP1 MIS18 binding protein 1 -0.0294674
CALU calumenin -0.0289445
HMGA1 high mobility group AT-hook 1 -0.0288391
TENT2 terminal nucleotidyltransferase 2 -0.0286214
RLF rearranged L-myc fusion -0.0283604
RPLP1 ribosomal protein, large, P1 -0.0280036
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0279767
CDC27 cell division cycle 27 -0.0278301
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0276762
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0275463
RPL12 ribosomal protein L12 -0.027318
ANLN anillin, actin binding protein -0.0272288
INSIG2 insulin induced gene 2 -0.0270676
LCORL ligand dependent nuclear receptor corepressor-like -0.0268813
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0265564
XPO1 exportin 1 -0.0262849
PDIA3 protein disulfide isomerase family A, member 3 -0.0259234
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0254645
B2M beta-2-microglobulin -0.0254398
RHEB Ras homolog enriched in brain -0.0253795
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0248374
PELO pelota homolog (Drosophila) -0.024387
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0242611
DDIT4 DNA-damage-inducible transcript 4 -0.0242374
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0240536
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0240216
RIOK3 RIO kinase 3 -0.0239729
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0239565
FOSL1 FOS-like antigen 1 -0.0239477
CCNL1 cyclin L1 -0.0239313