Isocorydine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Isocorydine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Isocorydine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.218895
COL11A1 collagen, type XI, alpha 1 0.181492
COL5A2 collagen, type V, alpha 2 0.122995
PEG10 paternally expressed 10 0.119313
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.116525
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0911665
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0784492
FOXP2 forkhead box P2 0.0571078
MKI67 marker of proliferation Ki-67 0.0558607
PRTG protogenin 0.0542898
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0501621
CALR calreticulin 0.0500596
KMT2C lysine (K)-specific methyltransferase 2C 0.0478001
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0474718
FNDC3A fibronectin type III domain containing 3A 0.041287
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0401432
NCKAP1 NCK-associated protein 1 0.0395614
PCBP2 poly(rC) binding protein 2 0.0394853
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0392347
OSBPL10 oxysterol binding protein-like 10 0.0392102
MYH9 myosin, heavy chain 9, non-muscle 0.0378753
GPC3 glypican 3 0.0371145
PDGFC platelet derived growth factor C 0.0367731
EEF2 eukaryotic translation elongation factor 2 0.0365446
KCTD16 potassium channel tetramerization domain containing 16 0.0355602
USP22 ubiquitin specific peptidase 22 0.0348348
EEF1G eukaryotic translation elongation factor 1 gamma 0.0338285
RIMS2 regulating synaptic membrane exocytosis 2 0.0329629
EGFR epidermal growth factor receptor 0.0320975
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0312686
ZFPM2 zinc finger protein, FOG family member 2 0.0305069
GMDS GDP-mannose 4,6-dehydratase 0.0292571
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0289226
POTEF POTE ankyrin domain family, member F 0.0277064
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0273249
NFIB nuclear factor I/B 0.0271458
PDIA3 protein disulfide isomerase family A, member 3 0.0265232
SFPQ splicing factor proline/glutamine-rich 0.0262851
RPS12 ribosomal protein S12 0.0262462
LRRC4C leucine rich repeat containing 4C 0.0262117
GANAB glucosidase, alpha; neutral AB 0.0261267
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0260955
KPNB1 karyopherin (importin) beta 1 0.0258394
CNTN6 contactin 6 0.0257201
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0256409
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0255821
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0254699
ZNF462 zinc finger protein 462 0.0254095
APP amyloid beta (A4) precursor protein 0.0253133
RPS2 ribosomal protein S2 0.0253009
TPM3 tropomyosin 3 0.025224
SPIDR scaffolding protein involved in DNA repair 0.0248576
ADGRV1 adhesion G protein-coupled receptor V1 0.0246176
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0245278
EPB41 erythrocyte membrane protein band 4.1 0.0244777
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0244012
MYH10 myosin, heavy chain 10, non-muscle 0.0243438
SARS1 seryl-tRNA synthetase 1 0.0241623
RNF213 ring finger protein 213 0.0239821
EXOC4 exocyst complex component 4 0.0238246
CSRNP3 cysteine-serine-rich nuclear protein 3 0.0237758
GOLGA4 golgin A4 0.0236427
PCDH18 protocadherin 18 0.0233613
CALU calumenin 0.0232346
PFN1 profilin 1 0.0231496
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0228068
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0226827
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0226644
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0224806
SRPK2 SRSF protein kinase 2 0.0224714
UNC5C unc-5 homolog C (C. elegans) 0.0224293
RBM6 RNA binding motif protein 6 0.0222972
FAM117B family with sequence similarity 117, member B 0.0219916
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0218162
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.021781
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0216513
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0215903
NALF1 NALCN channel auxiliary factor 1 0.021502
NF1 neurofibromin 1 0.021346
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0213449
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0211528
TTC21B tetratricopeptide repeat domain 21B 0.0211058
TBL1X transducin (beta)-like 1X-linked 0.0210658
KIF5B kinesin family member 5B 0.0210296
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0209845
MBIP MAP3K12 binding inhibitory protein 1 0.0209675
FAT1 FAT atypical cadherin 1 0.0209259
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0209074
ZC3H12B zinc finger CCCH-type containing 12B 0.0206422
RAB6A RAB6A, member RAS oncogene family 0.0204528
BRWD1 bromodomain and WD repeat domain containing 1 0.0204313
NSUN6 NOP2/Sun domain family, member 6 0.0203944
COL3A1 collagen, type III, alpha 1 0.020189
PRPF8 pre-mRNA processing factor 8 0.0200903
AFDN afadin, adherens junction formation factor 0.020021
RPL26 ribosomal protein L26 0.0198026
PTBP2 polypyrimidine tract binding protein 2 0.0197903
MED12L mediator complex subunit 12-like 0.0197388
TFG TRK-fused gene 0.0196096
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0195394

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.129311
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.10767
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.091628
VIM vimentin -0.0910427
PTMA prothymosin, alpha -0.0898486
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0881359
PLPP1 phospholipid phosphatase 1 -0.0851361
CADM2 cell adhesion molecule 2 -0.0792707
NTM neurotrimin -0.0724786
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0671275
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0642088
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.058734
RASAL2 RAS protein activator like 2 -0.0571186
TRIO trio Rho guanine nucleotide exchange factor -0.0564089
MRPS30 mitochondrial ribosomal protein S30 -0.0536584
NRG1 neuregulin 1 -0.0519352
EMP1 epithelial membrane protein 1 -0.051778
NPAS3 neuronal PAS domain protein 3 -0.0504065
CDC73 cell division cycle 73 -0.0481564
TRPS1 trichorhinophalangeal syndrome I -0.0480844
SORBS2 sorbin and SH3 domain containing 2 -0.0474231
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0474124
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0470728
HDAC9 histone deacetylase 9 -0.0459405
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0446287
RAI1 retinoic acid induced 1 -0.0444661
TMSB4X thymosin beta 4, X-linked -0.0439735
AHNAK AHNAK nucleoprotein -0.0430204
ANKRD33B ankyrin repeat domain 33B -0.041659
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.041546
TMSB10 thymosin beta 10 -0.0412384
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0409569
GNAS GNAS complex locus -0.0404445
SAMD4A sterile alpha motif domain containing 4A -0.0396935
NHSL1 NHS-like 1 -0.0394729
LYST lysosomal trafficking regulator -0.0390076
MED13L mediator complex subunit 13-like -0.0389282
HMGB1 high mobility group box 1 -0.0367977
FNDC3B fibronectin type III domain containing 3B -0.0367167
NEBL nebulette -0.0365085
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0361081
USP53 ubiquitin specific peptidase 53 -0.0359246
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.03585
RPLP1 ribosomal protein, large, P1 -0.0357148
HMGA2 high mobility group AT-hook 2 -0.0350345
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.034709
RPS24 ribosomal protein S24 -0.0346954
ZNF217 zinc finger protein 217 -0.0344088
COL1A2 collagen, type I, alpha 2 -0.0342349
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.034058
MPG N-methylpurine-DNA glycosylase -0.0332941
HSPB1 heat shock 27kDa protein 1 -0.0325422
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0321629
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.031438
ADGRG6 adhesion G protein-coupled receptor G6 -0.030926
USH2A Usher syndrome 2A (autosomal recessive, mild) -0.030609
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0305137
FBXO11 F-box protein 11 -0.0300752
UTRN utrophin -0.0299009
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0296583
PALLD palladin, cytoskeletal associated protein -0.0295624
PRELID2 PRELI domain containing 2 -0.0289631
CAVIN1 caveolae associated protein 1 -0.0283626
MARCHF6 membrane associated ring-CH-type finger 6 -0.0283581
FILIP1 filamin A interacting protein 1 -0.0280785
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0278275
CERT1 ceramide transporter 1 -0.0275793
KMT2E lysine (K)-specific methyltransferase 2E -0.027568
RDX radixin -0.0275071
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0274645
PARD3B par-3 family cell polarity regulator beta -0.0272578
PCLO piccolo presynaptic cytomatrix protein -0.0272516
ITSN1 intersectin 1 (SH3 domain protein) -0.0270329
MAP4 microtubule-associated protein 4 -0.0270278
SRP54 signal recognition particle 54kDa -0.0267164
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0265588
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0265266
ADGRL2 adhesion G protein-coupled receptor L2 -0.0264762
DENND5B DENN/MADD domain containing 5B -0.0264254
CELF1 CUGBP, Elav-like family member 1 -0.0264038
CPA6 carboxypeptidase A6 -0.0263495
JMJD1C jumonji domain containing 1C -0.0262512
IGF1R insulin-like growth factor 1 receptor -0.0262371
RAD51B RAD51 paralog B -0.026235
BIRC6 baculoviral IAP repeat containing 6 -0.0261639
PRR16 proline rich 16 -0.0260538
PCDH9 protocadherin 9 -0.0257852
DST dystonin -0.0255947
KLHL5 kelch-like family member 5 -0.0254563
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0254399
RTN4 reticulon 4 -0.0253613
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0252616
TNS3 tensin 3 -0.0252513
SLC44A5 solute carrier family 44, member 5 -0.0252468
SERBP1 SERPINE1 mRNA binding protein 1 -0.0250922
ZNF385D zinc finger protein 385D -0.0249352
UPP1 uridine phosphorylase 1 -0.0249118
NFE2L2 nuclear factor, erythroid 2-like 2 -0.024776
BTBD3 BTB (POZ) domain containing 3 -0.0247383
SLC38A2 solute carrier family 38, member 2 -0.0246192