Isocorydine_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Isocorydine perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Isocorydine_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.162053
HDAC9 histone deacetylase 9 0.11075
PYGB phosphorylase, glycogen; brain 0.0991996
VCL vinculin 0.0927628
GLI2 GLI family zinc finger 2 0.0828617
EGFR epidermal growth factor receptor 0.0796054
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0789804
TXNRD1 thioredoxin reductase 1 0.0769462
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0764416
TPT1 tumor protein, translationally-controlled 1 0.0735408
RPS8 ribosomal protein S8 0.0724339
MKI67 marker of proliferation Ki-67 0.0711149
PDGFC platelet derived growth factor C 0.0705533
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0678258
RPL26 ribosomal protein L26 0.0642403
ANXA1 annexin A1 0.0629266
GSE1 Gse1 coiled-coil protein 0.0574486
FOXP1 forkhead box P1 0.0562249
HSPA8 heat shock 70kDa protein 8 0.0558427
IGF2 insulin-like growth factor 2 0.0530868
LOXL3 lysyl oxidase-like 3 0.0526222
ENO1 enolase 1, (alpha) 0.0520043
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0512167
TJP1 tight junction protein 1 0.0503381
RPS12 ribosomal protein S12 0.049972
EEF1G eukaryotic translation elongation factor 1 gamma 0.049782
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0490716
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0485608
ZNF608 zinc finger protein 608 0.0483428
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0476603
PKM pyruvate kinase, muscle 0.0474568
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.046773
RPS2 ribosomal protein S2 0.0466483
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0458581
ADAM10 ADAM metallopeptidase domain 10 0.0451812
RPL35A ribosomal protein L35a 0.0436964
TPM4 tropomyosin 4 0.0436466
TM4SF1 transmembrane 4 L six family member 1 0.0420599
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.041987
POTEF POTE ankyrin domain family, member F 0.0407514
RPS3 ribosomal protein S3 0.0406145
TPM3 tropomyosin 3 0.0397312
KLF6 Kruppel-like factor 6 0.0396318
ZEB1 zinc finger E-box binding homeobox 1 0.0395002
MYH9 myosin, heavy chain 9, non-muscle 0.0381481
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0381035
AMOTL2 angiomotin like 2 0.0378225
EEF2 eukaryotic translation elongation factor 2 0.0373472
CORO1C coronin, actin binding protein, 1C 0.0371583
KPNB1 karyopherin (importin) beta 1 0.0365186
GANAB glucosidase, alpha; neutral AB 0.0359855
PCBP2 poly(rC) binding protein 2 0.0358656
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0357118
RPL13A ribosomal protein L13a 0.0355448
ZMIZ1 zinc finger, MIZ-type containing 1 0.0350725
TACC2 transforming, acidic coiled-coil containing protein 2 0.0350523
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0348254
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0346764
ARL4C ADP-ribosylation factor-like 4C 0.0337792
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0328746
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0327426
RPL36 ribosomal protein L36 0.0325613
BRD4 bromodomain containing 4 0.0324113
RPL3 ribosomal protein L3 0.0320441
SEPTIN9 septin 9 0.0311418
MYO5C myosin VC 0.0305577
IFI6 interferon, alpha-inducible protein 6 0.0305423
PFN1 profilin 1 0.0303003
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0301413
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0298066
SQSTM1 sequestosome 1 0.0295902
GLI3 GLI family zinc finger 3 0.0290157
EIF4B eukaryotic translation initiation factor 4B 0.02889
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0285744
MACROD2 MACRO domain containing 2 0.0284863
RPL23 ribosomal protein L23 0.0284536
RHOA ras homolog family member A 0.0280987
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0275875
HMGA1 high mobility group AT-hook 1 0.0272811
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 0.0271873
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0270976
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0269411
LRP12 low density lipoprotein receptor-related protein 12 0.0267609
BMP2K BMP2 inducible kinase 0.0264951
SPIDR scaffolding protein involved in DNA repair 0.0264303
SON SON DNA binding protein 0.0261525
EBNA1BP2 EBNA1 binding protein 2 0.0256235
NCKAP1 NCK-associated protein 1 0.025166
TRERF1 transcriptional regulating factor 1 0.0251456
KIF5B kinesin family member 5B 0.0250853
ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative) 0.024635
ADAR adenosine deaminase, RNA-specific 0.0245845
ANLN anillin, actin binding protein 0.024389
MACF1 microtubule-actin crosslinking factor 1 0.0242992
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.0242967
GTF2I general transcription factor IIi 0.0242026
RAB27B RAB27B, member RAS oncogene family 0.0241178
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0238593
NCEH1 neutral cholesterol ester hydrolase 1 0.0238394
DUSP4 dual specificity phosphatase 4 0.023787

decreased expression

Symbol Name Standardized Value
CPED1 cadherin-like and PC-esterase domain containing 1 -0.182126
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.172594
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.14018
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.134828
PTMA prothymosin, alpha -0.105948
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0956054
DLG1 discs, large homolog 1 (Drosophila) -0.0852466
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0827705
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0696536
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.069412
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0655054
EVI5 ecotropic viral integration site 5 -0.0638821
TTC3 tetratricopeptide repeat domain 3 -0.0615606
RPLP1 ribosomal protein, large, P1 -0.059619
GARS1 glycyl-tRNA synthetase 1 -0.05856
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0577061
S100A6 S100 calcium binding protein A6 -0.0482714
PNISR PNN-interacting serine/arginine-rich protein -0.0473543
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0471262
ECT2 epithelial cell transforming 2 -0.0451975
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0444372
RPLP0 ribosomal protein, large, P0 -0.0442846
SEC31A SEC31 homolog A (S. cerevisiae) -0.042836
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0420345
CAMKMT calmodulin-lysine N-methyltransferase -0.0419393
INTS6 integrator complex subunit 6 -0.0414309
NFIA nuclear factor I/A -0.0410485
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0407247
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.03936
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0372135
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0368466
RBM39 RNA binding motif protein 39 -0.0366521
RBM25 RNA binding motif protein 25 -0.0364853
AKAP9 A kinase (PRKA) anchor protein 9 -0.0359714
GOLGA4 golgin A4 -0.0355131
TTC28 tetratricopeptide repeat domain 28 -0.0347132
QKI QKI, KH domain containing, RNA binding -0.034644
PRELID2 PRELI domain containing 2 -0.0345717
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0345524
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0343067
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0341843
GLS2 glutaminase 2 (liver, mitochondrial) -0.0341669
DIAPH2 diaphanous-related formin 2 -0.033746
HELZ helicase with zinc finger -0.0334214
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0331143
COG6 component of oligomeric golgi complex 6 -0.032837
FHIT fragile histidine triad -0.0328132
RFC3 replication factor C (activator 1) 3, 38kDa -0.0327962
ZMYM2 zinc finger, MYM-type 2 -0.0326565
NEBL nebulette -0.0320941
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0319268
XPO1 exportin 1 -0.0311507
MON2 MON2 homolog (S. cerevisiae) -0.0311475
RRBP1 ribosome binding protein 1 -0.0311226
MORF4L2 mortality factor 4 like 2 -0.0308508
FNDC3B fibronectin type III domain containing 3B -0.0307693
TRA2A transformer 2 alpha homolog (Drosophila) -0.0307387
RAD18 RAD18 E3 ubiquitin protein ligase -0.0305826
LOC112694756 uncharaterized LOC112694756 -0.0304885
SEC24D SEC24 family member D -0.0302011
GPHN gephyrin -0.0296224
IARS1 isoleucyl-tRNA synthetase 1 -0.0296087
TMSB10 thymosin beta 10 -0.0293418
TMEM135 transmembrane protein 135 -0.029021
LCORL ligand dependent nuclear receptor corepressor-like -0.0290069
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0285224
GNAS GNAS complex locus -0.0283644
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0281951
ZNF217 zinc finger protein 217 -0.0281876
THOC2 THO complex 2 -0.0280882
RPL31 ribosomal protein L31 -0.027741
TMEM41B transmembrane protein 41B -0.0277399
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0276093
RHBDD1 rhomboid domain containing 1 -0.0276091
TOP1 topoisomerase (DNA) I -0.0274841
PATJ PATJ crumbs cell polarity complex component -0.0269057
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0267076
RPS24 ribosomal protein S24 -0.0266861
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0258458
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0258297
ZNF106 zinc finger protein 106 -0.0255669
ENO2 enolase 2 (gamma, neuronal) -0.0255267
MSI2 musashi RNA-binding protein 2 -0.0253161
TMEM263 transmembrane protein 263 -0.0252807
DENND1A DENN/MADD domain containing 1A -0.0249069
BABAM2 BRISC and BRCA1 A complex member 2 -0.0247826
LARS1 leucyl-tRNA synthetase 1 -0.024755
KDM3A lysine (K)-specific demethylase 3A -0.0247194
RAB1A RAB1A, member RAS oncogene family -0.0245463
TNPO1 transportin 1 -0.0244375
WSB1 WD repeat and SOCS box containing 1 -0.0244351
NBEAL1 neurobeachin-like 1 -0.0244045
ZNF638 zinc finger protein 638 -0.0243448
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0242398
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0238818
RPL14 ribosomal protein L14 -0.0238411
NBEA neurobeachin -0.0238366
COMMD10 COMM domain containing 10 -0.0237502
CENPE centromere protein E, 312kDa -0.0230821
MATR3 matrin 3 -0.0230727