Isotretinoin Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description A retinoic acid that is all-trans-retinoic acid in which the double bond which is alpha,beta- to the carboxy group is isomerised to Z configuration. A synthetic retinoid, it is used for the treatment of severe cases of acne and other skin diseases. (Chemical Entities of Biological Interest Ontology, CHEBI_6067)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/5282379
Similar Terms
Downloads & Tools

Genes

199 proteins with high or low expression in Isotretinoin relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
SRD5A3 steroid 5 alpha-reductase 3 2.91
HMOX1 heme oxygenase 1 1.8
FAM160A1 family with sequence similarity 160, member A1 0.98
CYP4F11 cytochrome P450, family 4, subfamily F, polypeptide 11 0.94
OSGIN1 oxidative stress induced growth inhibitor 1 0.94
CPTP ceramide-1-phosphate transfer protein 0.81
ARHGEF40 Rho guanine nucleotide exchange factor (GEF) 40 0.81
GCLM glutamate-cysteine ligase, modifier subunit 0.78
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 0.57
PSEN2 presenilin 2 0.56
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.53
GCLC glutamate-cysteine ligase, catalytic subunit 0.53
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.51
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1 0.5
NQO1 NAD(P)H dehydrogenase, quinone 1 0.49
ZC3H6 zinc finger CCCH-type containing 6 0.49
MAGEA2 melanoma antigen family A2 0.49
ZFP36 ZFP36 ring finger protein 0.48
TACSTD2 tumor-associated calcium signal transducer 2 0.48
TET2 tet methylcytosine dioxygenase 2 0.46
BRWD1 bromodomain and WD repeat domain containing 1 0.45
ANKIB1 ankyrin repeat and IBR domain containing 1 0.44
ADCK5 aarF domain containing kinase 5 0.44
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.43
PROS1 protein S (alpha) 0.43
KDM3A lysine (K)-specific demethylase 3A 0.43
RPE ribulose-5-phosphate-3-epimerase 0.42
SRXN1 sulfiredoxin 1 0.42
WSB2 WD repeat and SOCS box containing 2 0.41
MYH15 myosin, heavy chain 15 0.4
PFDN1 prefoldin subunit 1 0.4
KDM5B lysine (K)-specific demethylase 5B 0.4
ALAS1 5'-aminolevulinate synthase 1 0.39
KIAA1958 KIAA1958 0.39
RNF181 ring finger protein 181 0.39
TRIM16 tripartite motif containing 16 0.39
ZNF7 zinc finger protein 7 0.38
LGALSL lectin, galactoside-binding-like 0.38
RPL26 ribosomal protein L26 0.37
TXNRD1 thioredoxin reductase 1 0.37
BCAS2 breast carcinoma amplified sequence 2 0.37
MRPL12 mitochondrial ribosomal protein L12 0.37
POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa 0.36
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 0.36
CRPPA CDP-L-ribitol pyrophosphorylase A 0.36
DGKE diacylglycerol kinase, epsilon 64kDa 0.36
SYTL3 synaptotagmin-like 3 0.36
AMACR alpha-methylacyl-CoA racemase 0.36
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.35
SC5D sterol-C5-desaturase 0.35
BAHCC1 BAH domain and coiled-coil containing 1 0.35
SOD1 superoxide dismutase 1, soluble 0.35
HES1 hes family bHLH transcription factor 1 0.35
KMT2B lysine (K)-specific methyltransferase 2B 0.35
ANKRD13D ankyrin repeat domain 13 family, member D 0.34
HSPBAP1 HSPB (heat shock 27kDa) associated protein 1 0.34
C14ORF93 chromosome 14 open reading frame 93 0.34
EPHX4 epoxide hydrolase 4 0.34
ZNF142 zinc finger protein 142 0.34
ZNF35 zinc finger protein 35 0.33
FZD7 frizzled class receptor 7 0.33
NOTCH3 notch 3 0.33
GID8 GID complex subunit 8 0.33
TRIM9 tripartite motif containing 9 0.33
MIGA2 mitoguardin 2 0.33
RNF7 ring finger protein 7 0.33
GPRC5B G protein-coupled receptor, class C, group 5, member B 0.32
BHLHE40 basic helix-loop-helix family, member e40 0.32
MRPL50 mitochondrial ribosomal protein L50 0.32
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.32
PACRGL PARK2 co-regulated-like 0.31
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.31
AMN1 antagonist of mitotic exit network 1 homolog (S. cerevisiae) 0.31
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F 0.31
KIAA1107 KIAA1107 0.31
PRR3 proline rich 3 0.31
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.31
MSANTD4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 0.31
COMMD6 COMM domain containing 6 0.3
C18ORF32 chromosome 18 open reading frame 32 0.3
MYCBP MYC binding protein 0.3
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.3
CDK14 cyclin-dependent kinase 14 0.3
UBQLN1 ubiquilin 1 0.3
KLK6 kallikrein-related peptidase 6 0.3
KIAA1217 KIAA1217 0.29
HPS4 Hermansky-Pudlak syndrome 4 0.29
POMP proteasome maturation protein 0.29
JPT1 Jupiter microtubule associated homolog 1 0.29
HSPA1L heat shock 70kDa protein 1-like 0.29
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.29
ZNF57 zinc finger protein 57 0.29
TPK1 thiamin pyrophosphokinase 1 0.29
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 0.29
FAM110C family with sequence similarity 110, member C 0.29
ZNF354B zinc finger protein 354B 0.29
C2CD3 C2 calcium-dependent domain containing 3 0.28
ANGPTL4 angiopoietin-like 4 0.28
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 0.28
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.28

low expression

Symbol Name Standardized Value
MYO7B myosin VIIB -1.2
PIP prolactin-induced protein -1.09
CETN1 centrin, EF-hand protein, 1 -0.85
C7 complement component 7 -0.82
AZGP1 alpha-2-glycoprotein 1, zinc-binding -0.69
FURIN furin (paired basic amino acid cleaving enzyme) -0.66
MEX3C mex-3 RNA binding family member C -0.65
GREB1 growth regulation by estrogen in breast cancer 1 -0.62
OGFOD2 2-oxoglutarate and iron-dependent oxygenase domain containing 2 -0.6
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) -0.59
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.59
ZFHX3 zinc finger homeobox 3 -0.58
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) -0.56
GAS6 growth arrest-specific 6 -0.53
RAB36 RAB36, member RAS oncogene family -0.53
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 -0.51
CLTCL1 clathrin, heavy chain-like 1 -0.49
RGS19 regulator of G-protein signaling 19 -0.48
DENND4A DENN/MADD domain containing 4A -0.47
MCOLN3 mucolipin 3 -0.46
ERCC6 excision repair cross-complementation group 6 -0.46
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.45
DISP2 dispatched homolog 2 (Drosophila) -0.45
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.44
NOP10 NOP10 ribonucleoprotein -0.44
ANKRD22 ankyrin repeat domain 22 -0.43
C8ORF76 chromosome 8 open reading frame 76 -0.43
SMIM19 small integral membrane protein 19 -0.42
TBC1D32 TBC1 domain family, member 32 -0.42
ZNF526 zinc finger protein 526 -0.41
ZADH2 zinc binding alcohol dehydrogenase domain containing 2 -0.41
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5 -0.41
MT1X metallothionein 1X -0.41
WASHC3 WASH complex subunit 3 -0.4
CEP85L centrosomal protein 85kDa-like -0.4
FN1 fibronectin 1 -0.4
CAV1 caveolin 1, caveolae protein, 22kDa -0.39
ZNF655 zinc finger protein 655 -0.39
TPPP tubulin polymerization promoting protein -0.39
ZFAND2A zinc finger, AN1-type domain 2A -0.39
ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) -0.38
ATP23 ATP23 metallopeptidase and ATP synthase assembly factor homolog -0.37
ICA1 islet cell autoantigen 1, 69kDa -0.37
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.37
ABHD13 abhydrolase domain containing 13 -0.36
MFSD6 major facilitator superfamily domain containing 6 -0.36
MROH6 maestro heat-like repeat family member 6 -0.36
MNX1 motor neuron and pancreas homeobox 1 -0.36
H1-0 H1.0 linker histone -0.35
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino -0.35
JOSD1 Josephin domain containing 1 -0.35
PLEKHA6 pleckstrin homology domain containing, family A member 6 -0.35
MT2A metallothionein 2A -0.34
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.34
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 -0.34
TMEM11 transmembrane protein 11 -0.34
HIST1H1T histone cluster 1, H1t -0.34
ZNRD1 zinc ribbon domain containing 1 -0.33
SNRPC small nuclear ribonucleoprotein polypeptide C -0.33
LTN1 listerin E3 ubiquitin protein ligase 1 -0.33
TMEM104 transmembrane protein 104 -0.33
CKM creatine kinase, muscle -0.33
SOX9 SRY (sex determining region Y)-box 9 -0.33
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 -0.32
TSPAN3 tetraspanin 3 -0.32
IGFBP2 insulin-like growth factor binding protein 2, 36kDa -0.32
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) -0.32
TMEM222 transmembrane protein 222 -0.32
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) -0.32
MYO15B myosin XVB -0.31
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.31
YIPF1 Yip1 domain family, member 1 -0.31
RTL8C retrotransposon Gag like 8C -0.31
PCLO piccolo presynaptic cytomatrix protein -0.31
PLK2 polo-like kinase 2 -0.3
MAZ MYC-associated zinc finger protein (purine-binding transcription factor) -0.3
MT1L metallothionein 1L (gene/pseudogene) -0.3
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein -0.29
TRAIP TRAF interacting protein -0.29
COX18 COX18 cytochrome c oxidase assembly factor -0.29
CNTNAP3 contactin associated protein-like 3 -0.29
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 -0.29
RBP1 retinol binding protein 1, cellular -0.29
TOM1L2 target of myb1-like 2 (chicken) -0.29
ANTXR2 anthrax toxin receptor 2 -0.28
DOP1A DOP1 leucine zipper like protein A -0.28
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) -0.28
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B -0.28
DUSP6 dual specificity phosphatase 6 -0.28
PEX26 peroxisomal biogenesis factor 26 -0.28
FGB fibrinogen beta chain -0.28
NOP16 NOP16 nucleolar protein -0.28
METAP1D methionyl aminopeptidase type 1D (mitochondrial) -0.28
FKTN fukutin -0.28
BSN bassoon presynaptic cytomatrix protein -0.28
FAM192A family with sequence similarity 192, member A -0.28
HMGB3 high mobility group box 3 -0.28
BCL6 B-cell CLL/lymphoma 6 -0.27
ADGRE2 adhesion G protein-coupled receptor E2 -0.27