Ivabradine (hydrochloride)_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ivabradine (hydrochloride) perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ivabradine (hydrochloride)_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.0812905
AHNAK AHNAK nucleoprotein 0.0741249
CTNND1 catenin (cadherin-associated protein), delta 1 0.0723495
DSCAM Down syndrome cell adhesion molecule 0.0675602
ACTN4 actinin, alpha 4 0.0650013
OGA O-GlcNAcase 0.0626451
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0623282
STK24 serine/threonine kinase 24 0.0615066
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0598989
KMT2C lysine (K)-specific methyltransferase 2C 0.0581621
RAD21 RAD21 homolog (S. pombe) 0.0527121
RPL4 ribosomal protein L4 0.0513989
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0504244
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0497988
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0494406
RPL23 ribosomal protein L23 0.0493361
BIRC6 baculoviral IAP repeat containing 6 0.0490472
BCL2L1 BCL2-like 1 0.0486596
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0481401
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0480506
PICALM phosphatidylinositol binding clathrin assembly protein 0.0475286
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0462031
PTK2 protein tyrosine kinase 2 0.0459948
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0446496
PCBP2 poly(rC) binding protein 2 0.0426824
WWC1 WW and C2 domain containing 1 0.0414546
ZMYM2 zinc finger, MYM-type 2 0.0405452
RBM39 RNA binding motif protein 39 0.0405112
CKAP5 cytoskeleton associated protein 5 0.0397291
HYOU1 hypoxia up-regulated 1 0.0393592
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0391794
MYH9 myosin, heavy chain 9, non-muscle 0.0391438
ANKRD11 ankyrin repeat domain 11 0.0388901
EIF4B eukaryotic translation initiation factor 4B 0.0388428
COG5 component of oligomeric golgi complex 5 0.0380575
NECTIN2 nectin cell adhesion molecule 2 0.0375618
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0374028
KDM6A lysine (K)-specific demethylase 6A 0.0371643
ANXA11 annexin A11 0.0369693
GCLC glutamate-cysteine ligase, catalytic subunit 0.0367393
MSN moesin 0.0364661
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0360636
SMAD3 SMAD family member 3 0.0358023
RPS12 ribosomal protein S12 0.0356119
ADAM17 ADAM metallopeptidase domain 17 0.035589
PUM2 pumilio RNA-binding family member 2 0.035437
ESRP1 epithelial splicing regulatory protein 1 0.0352085
FAM135A family with sequence similarity 135, member A 0.0350403
RPL3 ribosomal protein L3 0.0346946
PRRC2C proline-rich coiled-coil 2C 0.0345893
AFDN afadin, adherens junction formation factor 0.034558
TOP1 topoisomerase (DNA) I 0.0344335
ATXN1 ataxin 1 0.0342002
NF1 neurofibromin 1 0.0340357
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0337808
RPS17 ribosomal protein S17 0.0336491
PDIA4 protein disulfide isomerase family A, member 4 0.0335226
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.03326
ADARB1 adenosine deaminase, RNA-specific, B1 0.0330924
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0329732
TES testin LIM domain protein 0.0326067
RPS3 ribosomal protein S3 0.0325136
VMP1 vacuole membrane protein 1 0.0321188
CHD7 chromodomain helicase DNA binding protein 7 0.032033
RB1CC1 RB1-inducible coiled-coil 1 0.0319
NIBAN2 niban apoptosis regulator 2 0.031304
JMJD1C jumonji domain containing 1C 0.0312926
ANLN anillin, actin binding protein 0.0312711
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0312586
TPM3 tropomyosin 3 0.0310608
GSK3B glycogen synthase kinase 3 beta 0.0308476
CENPF centromere protein F, 350/400kDa 0.0307149
MED13L mediator complex subunit 13-like 0.0305946
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0305075
FAM91A1 family with sequence similarity 91, member A1 0.0304471
SEPTIN9 septin 9 0.0304272
ATAD2 ATPase family, AAA domain containing 2 0.0302138
TCEA1 transcription elongation factor A (SII), 1 0.0300675
RBM33 RNA binding motif protein 33 0.0299501
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0297836
SBF2 SET binding factor 2 0.0296747
CD46 CD46 molecule, complement regulatory protein 0.0296402
IPO7 importin 7 0.0293864
NEK7 NIMA-related kinase 7 0.0290471
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0290372
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0289375
USP34 ubiquitin specific peptidase 34 0.0288968
ITGB4 integrin, beta 4 0.028797
TUFT1 tuftelin 1 0.028732
LCOR ligand dependent nuclear receptor corepressor 0.028649
VCL vinculin 0.0284275
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0283558
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0282783
LATS2 large tumor suppressor kinase 2 0.0282702
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0281179
ANKRD10 ankyrin repeat domain 10 0.0281127
RNF145 ring finger protein 145 0.0278889
ARHGAP23 Rho GTPase activating protein 23 0.0275983
AGRN agrin 0.0275547
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0275139

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.208018
TPT1 tumor protein, translationally-controlled 1 -0.191035
KRT20 keratin 20, type I -0.190356
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.178942
FRY furry homolog (Drosophila) -0.0996979
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0956069
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0952624
EGR1 early growth response 1 -0.0855392
LOC102724023 ES1 protein homolog, mitochondrial -0.0749633
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0738314
MYH14 myosin, heavy chain 14, non-muscle -0.0729458
LDHA lactate dehydrogenase A -0.0697643
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0668644
JUN jun proto-oncogene -0.0646325
PGK1 phosphoglycerate kinase 1 -0.0620899
KRT19 keratin 19, type I -0.0615133
ITPKC inositol-trisphosphate 3-kinase C -0.0602065
AGR2 anterior gradient 2 -0.0587744
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0584975
RPS6 ribosomal protein S6 -0.0568694
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0564114
PDIA3 protein disulfide isomerase family A, member 3 -0.0563809
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0561908
RPL35A ribosomal protein L35a -0.0530253
LMO7 LIM domain 7 -0.0509223
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0507143
POF1B premature ovarian failure, 1B -0.0493139
ZMYND8 zinc finger, MYND-type containing 8 -0.0492758
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0490956
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0483432
FTH1 ferritin, heavy polypeptide 1 -0.0460739
RNF213 ring finger protein 213 -0.0459765
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0459732
TMEM123 transmembrane protein 123 -0.0450882
RPLP0 ribosomal protein, large, P0 -0.0448436
MMP7 matrix metallopeptidase 7 -0.0441486
ACTG1 actin gamma 1 -0.044106
EZR ezrin -0.0440708
WDR45B WD repeat domain 45B -0.0437921
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.043093
EEF1G eukaryotic translation elongation factor 1 gamma -0.0399931
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0394685
RAB7A RAB7A, member RAS oncogene family -0.0389796
TJP1 tight junction protein 1 -0.0388515
SAMD12 sterile alpha motif domain containing 12 -0.0385968
LAMA4 laminin, alpha 4 -0.0380884
FBXO32 F-box protein 32 -0.0374886
TRIB1 tribbles pseudokinase 1 -0.0372958
SQSTM1 sequestosome 1 -0.0360278
EPB41L5 erythrocyte membrane protein band 4.1 like 5 -0.0350758
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0348582
FNDC3B fibronectin type III domain containing 3B -0.0337543
EMP1 epithelial membrane protein 1 -0.0331351
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0331231
MAML3 mastermind-like 3 (Drosophila) -0.0329476
FOXO3 forkhead box O3 -0.032572
GNAS GNAS complex locus -0.0321563
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0317768
TMEM65 transmembrane protein 65 -0.0313203
EXPH5 exophilin 5 -0.0309944
MUC13 mucin 13, cell surface associated -0.0308015
GCC2 GRIP and coiled-coil domain containing 2 -0.0303992
AREG amphiregulin -0.0303252
LYZ lysozyme -0.0302204
B2M beta-2-microglobulin -0.0299299
S100A6 S100 calcium binding protein A6 -0.0297393
KLF3 Kruppel-like factor 3 (basic) -0.0297018
S100A10 S100 calcium binding protein A10 -0.0295256
RRBP1 ribosome binding protein 1 -0.0292946
SPDYA speedy/RINGO cell cycle regulator family member A -0.0289445
WARS1 tryptophanyl-tRNA synthetase 1 -0.0285398
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0284901
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0280374
CD63 CD63 molecule -0.027986
HMGA1 high mobility group AT-hook 1 -0.0277763
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0273448
RPL13A ribosomal protein L13a -0.026926
PTPRK protein tyrosine phosphatase, receptor type, K -0.026613
PPARD peroxisome proliferator-activated receptor delta -0.026575
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.026193
PKM pyruvate kinase, muscle -0.0261854
TLE4 transducin-like enhancer of split 4 -0.0261735
PCED1B PC-esterase domain containing 1B -0.0259013
TM4SF1 transmembrane 4 L six family member 1 -0.0257985
SOX4 SRY (sex determining region Y)-box 4 -0.0255958
DIAPH2 diaphanous-related formin 2 -0.0255582
RPS11 ribosomal protein S11 -0.0250721
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0249422
CRABP2 cellular retinoic acid binding protein 2 -0.024636
GSN gelsolin -0.0244393
ZFHX3 zinc finger homeobox 3 -0.0244012
FBXO11 F-box protein 11 -0.0241072
ARF4 ADP-ribosylation factor 4 -0.0240255
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0239776
TMEM45B transmembrane protein 45B -0.0239179
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0238687
SLC38A1 solute carrier family 38, member 1 -0.0238441
SDCBP syndecan binding protein (syntenin) -0.0237317
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0237191
MYADM myeloid-associated differentiation marker -0.0234675