Ivabradine (hydrochloride)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ivabradine (hydrochloride) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ivabradine (hydrochloride)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 0.142541
LAMB3 laminin, beta 3 0.118509
ENO1 enolase 1, (alpha) 0.0834062
RPL4 ribosomal protein L4 0.0776019
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0692202
MCL1 myeloid cell leukemia 1 0.0666757
SET SET nuclear proto-oncogene 0.0660161
AHNAK AHNAK nucleoprotein 0.0655466
EEF2 eukaryotic translation elongation factor 2 0.0635461
RPS12 ribosomal protein S12 0.0623671
EIF4B eukaryotic translation initiation factor 4B 0.0601995
RPL3 ribosomal protein L3 0.0590555
RPS3 ribosomal protein S3 0.0571333
PTMA prothymosin, alpha 0.0533715
PGK1 phosphoglycerate kinase 1 0.0515498
RPL37A ribosomal protein L37a 0.0486495
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0485971
RPS27A ribosomal protein S27a 0.0446996
AKAP12 A kinase (PRKA) anchor protein 12 0.0439711
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0432086
MYH9 myosin, heavy chain 9, non-muscle 0.0422528
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0421287
SAMD4A sterile alpha motif domain containing 4A 0.0421202
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0419113
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0376987
HSPA8 heat shock 70kDa protein 8 0.0372344
OGA O-GlcNAcase 0.0371644
WDR26 WD repeat domain 26 0.0362256
BZW1 basic leucine zipper and W2 domains 1 0.0360322
TXNRD1 thioredoxin reductase 1 0.0356692
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0354647
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0349238
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0347304
EIF4A1 eukaryotic translation initiation factor 4A1 0.0336982
USP34 ubiquitin specific peptidase 34 0.0330472
STK4 serine/threonine kinase 4 0.0327529
CELF1 CUGBP, Elav-like family member 1 0.0323882
PFKP phosphofructokinase, platelet 0.0323108
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0315945
RB1CC1 RB1-inducible coiled-coil 1 0.0311197
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0308419
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.030821
DSCAM Down syndrome cell adhesion molecule 0.0305283
EGLN1 egl-9 family hypoxia-inducible factor 1 0.029613
PRELID2 PRELI domain containing 2 0.0290668
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0286808
RPL7 ribosomal protein L7 0.0281957
CORO1C coronin, actin binding protein, 1C 0.0280004
MAST4 microtubule associated serine/threonine kinase family member 4 0.0271336
RPL26 ribosomal protein L26 0.0270597
TOP2B topoisomerase (DNA) II beta 180kDa 0.0269246
CHD7 chromodomain helicase DNA binding protein 7 0.0266099
AFDN afadin, adherens junction formation factor 0.0264802
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0263044
GIGYF2 GRB10 interacting GYF protein 2 0.0262791
NIBAN2 niban apoptosis regulator 2 0.0261856
CTNND1 catenin (cadherin-associated protein), delta 1 0.0261462
ENO2 enolase 2 (gamma, neuronal) 0.0258232
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0256239
RPS2 ribosomal protein S2 0.0256181
GPR107 G protein-coupled receptor 107 0.0255062
FNBP4 formin binding protein 4 0.0254301
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0253164
NCKAP1 NCK-associated protein 1 0.0252939
ATP13A3 ATPase type 13A3 0.0252526
SLC35F5 solute carrier family 35, member F5 0.0252431
KDM5C lysine (K)-specific demethylase 5C 0.0251713
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0251584
GOLM1 golgi membrane protein 1 0.0251222
SPRED1 sprouty-related, EVH1 domain containing 1 0.0246624
XRN1 5'-3' exoribonuclease 1 0.0246147
WDR33 WD repeat domain 33 0.0245256
YEATS2 YEATS domain containing 2 0.0240497
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0238348
URI1 URI1, prefoldin-like chaperone 0.0235355
APP amyloid beta (A4) precursor protein 0.0232143
SFPQ splicing factor proline/glutamine-rich 0.0230321
TUT7 terminal uridylyl transferase 7 0.0229823
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0228501
ABI1 abl-interactor 1 0.0227739
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0226978
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0226824
ACTN1 actinin, alpha 1 0.0226079
CEP350 centrosomal protein 350kDa 0.0224505
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0224121
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0222746
EFR3A EFR3 homolog A (S. cerevisiae) 0.0222584
ZNF106 zinc finger protein 106 0.0222064
FLNA filamin A, alpha 0.0221571
KLC1 kinesin light chain 1 0.0221344
FAM91A1 family with sequence similarity 91, member A1 0.0221091
NGLY1 N-glycanase 1 0.022094
DLC1 DLC1 Rho GTPase activating protein 0.0220147
ANKRD11 ankyrin repeat domain 11 0.0220142
EHBP1L1 EH domain binding protein 1-like 1 0.0219589
FMNL2 formin-like 2 0.0217834
RPS17 ribosomal protein S17 0.0217209
CHD9 chromodomain helicase DNA binding protein 9 0.021687
AMPD3 adenosine monophosphate deaminase 3 0.0216803
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0216203

decreased expression

Symbol Name Standardized Value
MCTP1 multiple C2 domains, transmembrane 1 -0.137212
FRMD6 FERM domain containing 6 -0.134908
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.120361
IARS1 isoleucyl-tRNA synthetase 1 -0.119914
RAB7A RAB7A, member RAS oncogene family -0.101469
NABP1 nucleic acid binding protein 1 -0.0999579
RPS6 ribosomal protein S6 -0.0985925
ZNF438 zinc finger protein 438 -0.0935373
JMJD1C jumonji domain containing 1C -0.0927498
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0891152
HMGA1 high mobility group AT-hook 1 -0.0780975
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0770281
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0754566
NAV3 neuron navigator 3 -0.0752167
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.074483
EGR1 early growth response 1 -0.0674028
RPL8 ribosomal protein L8 -0.0651005
FTL ferritin, light polypeptide -0.0612647
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0579597
MT2A metallothionein 2A -0.0573888
OSBPL8 oxysterol binding protein-like 8 -0.0573406
TSC22D2 TSC22 domain family, member 2 -0.0542609
RAP1B RAP1B, member of RAS oncogene family -0.0539162
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0531411
FNDC3B fibronectin type III domain containing 3B -0.0527444
PFN1 profilin 1 -0.0515678
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0506757
ZFAND3 zinc finger, AN1-type domain 3 -0.0500439
PARD3 par-3 family cell polarity regulator -0.0491147
IFI16 interferon, gamma-inducible protein 16 -0.0487609
KMT2E lysine (K)-specific methyltransferase 2E -0.0465448
INTS6 integrator complex subunit 6 -0.045623
PDIA3 protein disulfide isomerase family A, member 3 -0.0453646
SLC38A2 solute carrier family 38, member 2 -0.0450124
ZFP36L1 ZFP36 ring finger protein-like 1 -0.044791
RPL35A ribosomal protein L35a -0.0440061
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0433197
SP100 SP100 nuclear antigen -0.0431605
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0429558
HMGA2 high mobility group AT-hook 2 -0.0428317
FNIP1 folliculin interacting protein 1 -0.0426086
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.042242
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0421687
BNC2 basonuclin 2 -0.0418142
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0411892
SETD5 SET domain containing 5 -0.039469
ERBIN erbb2 interacting protein -0.0391362
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0377839
BLZF1 basic leucine zipper nuclear factor 1 -0.0372816
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.037118
CALD1 caldesmon 1 -0.0369933
WAC WW domain containing adaptor with coiled-coil -0.0368402
IFRD1 interferon-related developmental regulator 1 -0.0362286
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0360721
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0358669
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0349807
RAB3IP RAB3A interacting protein -0.0349272
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0339058
TMEM87A transmembrane protein 87A -0.0339048
STC1 stanniocalcin 1 -0.0325503
POTEF POTE ankyrin domain family, member F -0.032218
CCNL1 cyclin L1 -0.0319908
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0317643
OLA1 Obg-like ATPase 1 -0.0315297
TMSB10 thymosin beta 10 -0.031469
BBX bobby sox homolog (Drosophila) -0.0311432
RTN4 reticulon 4 -0.0308754
ADNP activity-dependent neuroprotector homeobox -0.0306737
SDCBP syndecan binding protein (syntenin) -0.0306303
TPT1 tumor protein, translationally-controlled 1 -0.0300545
RPLP0 ribosomal protein, large, P0 -0.0300049
RHEB Ras homolog enriched in brain -0.0298581
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0297233
RUNX1 runt-related transcription factor 1 -0.0296606
ALCAM activated leukocyte cell adhesion molecule -0.0295105
VMP1 vacuole membrane protein 1 -0.0293584
GTF2B general transcription factor IIB -0.0292533
CHD1 chromodomain helicase DNA binding protein 1 -0.0290651
FHIT fragile histidine triad -0.0289772
STAU1 staufen double-stranded RNA binding protein 1 -0.0286749
NOCT nocturnin -0.0284842
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.028477
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0283602
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0283457
NAMPT nicotinamide phosphoribosyltransferase -0.0281046
PUM1 pumilio RNA-binding family member 1 -0.0280493
IL6ST interleukin 6 signal transducer -0.0280034
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0278406
PIAS1 protein inhibitor of activated STAT, 1 -0.0278364
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0277647
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.027759
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0277197
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.027714
ARF4 ADP-ribosylation factor 4 -0.0276946
SPDYA speedy/RINGO cell cycle regulator family member A -0.0275494
FUS FUS RNA binding protein -0.0275442
RIGI RNA sensor RIG-I -0.0275215
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.027174
CERT1 ceramide transporter 1 -0.02714
SMC4 structural maintenance of chromosomes 4 -0.0269653