Ivabradine (hydrochloride)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ivabradine (hydrochloride) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ivabradine (hydrochloride)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.125852
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.085181
AKAP12 A kinase (PRKA) anchor protein 12 0.0793161
RPS3 ribosomal protein S3 0.0783318
RPL3 ribosomal protein L3 0.0643563
ENO1 enolase 1, (alpha) 0.0583812
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.055654
POTEF POTE ankyrin domain family, member F 0.0535614
PCBP2 poly(rC) binding protein 2 0.0530325
TPM3 tropomyosin 3 0.0507709
MSN moesin 0.0503316
FLNB filamin B, beta 0.0498669
NOTCH2 notch 2 0.0413963
RPS12 ribosomal protein S12 0.0403267
MCL1 myeloid cell leukemia 1 0.0361048
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0359583
PTMA prothymosin, alpha 0.0358058
VIM vimentin 0.0353929
NFE2L1 nuclear factor, erythroid 2-like 1 0.0348006
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0340446
KMT2E lysine (K)-specific methyltransferase 2E 0.0328592
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.031524
MYH9 myosin, heavy chain 9, non-muscle 0.0311658
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0299712
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0290601
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0279698
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.027852
SET SET nuclear proto-oncogene 0.0274714
PDIA6 protein disulfide isomerase family A, member 6 0.0273725
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0272656
PRELID2 PRELI domain containing 2 0.0272623
AHNAK AHNAK nucleoprotein 0.0271651
EIF4A1 eukaryotic translation initiation factor 4A1 0.0269625
ENO2 enolase 2 (gamma, neuronal) 0.0267789
FMNL2 formin-like 2 0.026471
UBA6 ubiquitin-like modifier activating enzyme 6 0.0258643
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.025117
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0249141
ESYT2 extended synaptotagmin-like protein 2 0.0247322
VEGFA vascular endothelial growth factor A 0.0247115
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0246121
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0245707
EIF4B eukaryotic translation initiation factor 4B 0.0242283
ERRFI1 ERBB receptor feedback inhibitor 1 0.0241032
CENPF centromere protein F, 350/400kDa 0.0239913
ASPH aspartate beta-hydroxylase 0.023969
DIAPH1 diaphanous-related formin 1 0.0237562
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.023745
ANGPTL4 angiopoietin-like 4 0.0234025
BCAP31 B-cell receptor-associated protein 31 0.0232933
KTN1 kinectin 1 (kinesin receptor) 0.0231418
MSI2 musashi RNA-binding protein 2 0.0229506
GARS1 glycyl-tRNA synthetase 1 0.0227462
FAM13A family with sequence similarity 13, member A 0.0223276
FAM120A family with sequence similarity 120A 0.022304
ANXA5 annexin A5 0.0214453
ADAM17 ADAM metallopeptidase domain 17 0.021402
ANKRD11 ankyrin repeat domain 11 0.0213314
BIRC7 baculoviral IAP repeat containing 7 0.0209826
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0209033
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0204805
ZNF292 zinc finger protein 292 0.0203638
SFPQ splicing factor proline/glutamine-rich 0.0203627
FAM219A family with sequence similarity 219, member A 0.0202584
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0195371
EZR ezrin 0.0193249
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.019228
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.019098
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.018867
NGLY1 N-glycanase 1 0.0188616
B2M beta-2-microglobulin 0.0187095
CEP250 centrosomal protein 250kDa 0.0187094
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0186777
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0186095
RPL37A ribosomal protein L37a 0.0185888
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0183986
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0183624
KMT2C lysine (K)-specific methyltransferase 2C 0.0182946
TNIP1 TNFAIP3 interacting protein 1 0.0181447
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0180945
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0179758
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0177873
RNF149 ring finger protein 149 0.017771
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0176531
BBX bobby sox homolog (Drosophila) 0.0175907
TGFBR1 transforming growth factor, beta receptor 1 0.0175354
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0175244
CORO1C coronin, actin binding protein, 1C 0.0174373
PKM pyruvate kinase, muscle 0.0171809
MMP12 matrix metallopeptidase 12 0.0168288
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0167456
SEC23A Sec23 homolog A (S. cerevisiae) 0.0167297
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0165804
INSIG2 insulin induced gene 2 0.0165602
CSDE1 cold shock domain containing E1, RNA-binding 0.0165056
VMP1 vacuole membrane protein 1 0.0163276
RANGAP1 Ran GTPase activating protein 1 0.0162564
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0160514
TNS1 tensin 1 0.0157894
IQGAP3 IQ motif containing GTPase activating protein 3 0.0156751

decreased expression

Symbol Name Standardized Value
FMN1 formin 1 -0.203454
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.178972
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.171505
LSAMP limbic system-associated membrane protein -0.119248
CCND1 cyclin D1 -0.0886592
NRG3 neuregulin 3 -0.0869848
FRMD4A FERM domain containing 4A -0.079961
VDAC1 voltage-dependent anion channel 1 -0.0652821
FRMD5 FERM domain containing 5 -0.0606819
RAB7A RAB7A, member RAS oncogene family -0.059966
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0592525
FN1 fibronectin 1 -0.0560965
PMEL premelanosome protein -0.0505149
SQSTM1 sequestosome 1 -0.049254
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0464371
HDAC9 histone deacetylase 9 -0.0461527
RPL35A ribosomal protein L35a -0.0448816
COMMD10 COMM domain containing 10 -0.0408048
ZBTB20 zinc finger and BTB domain containing 20 -0.0395567
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0386821
ANKRD28 ankyrin repeat domain 28 -0.0376756
CDK6 cyclin-dependent kinase 6 -0.0369766
FHIT fragile histidine triad -0.0365248
TNNC1 troponin C type 1 (slow) -0.0348802
EMP1 epithelial membrane protein 1 -0.0334753
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0334331
NF1 neurofibromin 1 -0.0319517
HMGA1 high mobility group AT-hook 1 -0.0318439
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0314445
TENM1 teneurin transmembrane protein 1 -0.0313076
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0301923
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0300678
SFTPA2 surfactant protein A2 -0.0299565
RPS24 ribosomal protein S24 -0.0298674
PGK1 phosphoglycerate kinase 1 -0.0295196
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0288789
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0288498
TUBB tubulin, beta class I -0.0287799
IFI16 interferon, gamma-inducible protein 16 -0.0284929
RPL38 ribosomal protein L38 -0.0280197
TPT1 tumor protein, translationally-controlled 1 -0.0279462
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0277776
FUS FUS RNA binding protein -0.0274204
BCAS3 breast carcinoma amplified sequence 3 -0.0273939
CTSD cathepsin D -0.0272273
TM4SF1 transmembrane 4 L six family member 1 -0.0270296
RPS6 ribosomal protein S6 -0.0266154
SOX6 SRY (sex determining region Y)-box 6 -0.0263658
LOC112694756 uncharaterized LOC112694756 -0.0261255
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0259895
SP100 SP100 nuclear antigen -0.0253829
ZNFX1 zinc finger, NFX1-type containing 1 -0.0250837
PLSCR1 phospholipid scramblase 1 -0.0249752
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0249394
CD44 CD44 molecule (Indian blood group) -0.0248878
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0245047
CLINT1 clathrin interactor 1 -0.024476
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0243735
RPL34 ribosomal protein L34 -0.0243462
RIGI RNA sensor RIG-I -0.0242102
LDHA lactate dehydrogenase A -0.0240186
RRBP1 ribosome binding protein 1 -0.0238418
PDIA3 protein disulfide isomerase family A, member 3 -0.0238356
HDAC8 histone deacetylase 8 -0.023659
FARP2 FERM, RhoGEF and pleckstrin domain protein 2 -0.0236346
PCLO piccolo presynaptic cytomatrix protein -0.0233665
APOD apolipoprotein D -0.0231439
HLA-B major histocompatibility complex, class I, B -0.0229925
ARF1 ADP-ribosylation factor 1 -0.0224556
UBC ubiquitin C -0.0223241
RHOBTB3 Rho-related BTB domain containing 3 -0.0223126
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0214791
TCF20 transcription factor 20 (AR1) -0.0214727
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0212607
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0211775
RPL8 ribosomal protein L8 -0.0211684
TMEM263 transmembrane protein 263 -0.0211667
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0210323
ERBIN erbb2 interacting protein -0.0209787
WNT2B wingless-type MMTV integration site family, member 2B -0.0208612
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0207508
BLZF1 basic leucine zipper nuclear factor 1 -0.0204112
ANKRD17 ankyrin repeat domain 17 -0.0203645
GNS glucosamine (N-acetyl)-6-sulfatase -0.020218
TASOR2 transcription activation suppressor family member 2 -0.020074
PEX5L peroxisomal biogenesis factor 5-like -0.0200248
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0198388
ANKHD1 ankyrin repeat and KH domain containing 1 -0.019804
TRIM56 tripartite motif containing 56 -0.0196795
ATF6 activating transcription factor 6 -0.0196754
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.019632
ZMYND8 zinc finger, MYND-type containing 8 -0.0195292
RPS21 ribosomal protein S21 -0.0194899
TRIO trio Rho guanine nucleotide exchange factor -0.0193507
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0193401
PLCB4 phospholipase C, beta 4 -0.0193008
FER fer (fps/fes related) tyrosine kinase -0.0192847
BPTF bromodomain PHD finger transcription factor -0.0191033
SPAG9 sperm associated antigen 9 -0.0189997
HMGB1 high mobility group box 1 -0.0187965