Ivabradine (hydrochloride)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ivabradine (hydrochloride) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ivabradine (hydrochloride)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.234903
VCL vinculin 0.17733
AHNAK AHNAK nucleoprotein 0.163037
TMSB4X thymosin beta 4, X-linked 0.144755
ACTG1 actin gamma 1 0.143851
PDE4B phosphodiesterase 4B, cAMP-specific 0.135905
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.122372
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.11318
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0926165
TJP1 tight junction protein 1 0.0908253
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0902675
ENO1 enolase 1, (alpha) 0.0870088
EEF2 eukaryotic translation elongation factor 2 0.0848762
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0834775
FOXP1 forkhead box P1 0.0834332
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0793626
POTEF POTE ankyrin domain family, member F 0.0765976
EFNA5 ephrin-A5 0.0726071
NPAS2 neuronal PAS domain protein 2 0.0710653
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0708689
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0702536
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0678708
CPED1 cadherin-like and PC-esterase domain containing 1 0.0675152
PABPC1 poly(A) binding protein, cytoplasmic 1 0.062275
NFIA nuclear factor I/A 0.0603135
PCBP2 poly(rC) binding protein 2 0.0597951
EIF4A1 eukaryotic translation initiation factor 4A1 0.0582036
RPL3 ribosomal protein L3 0.057946
DSCAM Down syndrome cell adhesion molecule 0.0565926
ENO2 enolase 2 (gamma, neuronal) 0.0564911
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0553437
APP amyloid beta (A4) precursor protein 0.0550129
CAMKMT calmodulin-lysine N-methyltransferase 0.052226
DLG1 discs, large homolog 1 (Drosophila) 0.0516519
PRELID2 PRELI domain containing 2 0.0515284
RPL23 ribosomal protein L23 0.0511072
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0498282
CALR calreticulin 0.0485556
SET SET nuclear proto-oncogene 0.0481126
SSBP2 single-stranded DNA binding protein 2 0.0469901
RPL4 ribosomal protein L4 0.0462642
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0462428
CSDE1 cold shock domain containing E1, RNA-binding 0.0460664
LPP LIM domain containing preferred translocation partner in lipoma 0.0457787
NAP1L1 nucleosome assembly protein 1-like 1 0.045725
RPL37A ribosomal protein L37a 0.0445808
ZEB1 zinc finger E-box binding homeobox 1 0.0442116
PDGFC platelet derived growth factor C 0.043984
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0437718
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0430985
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.042696
NBEA neurobeachin 0.0422945
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0420643
HDAC9 histone deacetylase 9 0.041155
EIF4B eukaryotic translation initiation factor 4B 0.0408439
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0403528
SMYD3 SET and MYND domain containing 3 0.0400593
ANKRD11 ankyrin repeat domain 11 0.0400066
PTPRG protein tyrosine phosphatase, receptor type, G 0.0383257
EIF4A2 eukaryotic translation initiation factor 4A2 0.0377563
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0376926
EVI5 ecotropic viral integration site 5 0.037089
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0370222
SOX6 SRY (sex determining region Y)-box 6 0.0369657
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0368013
CANX calnexin 0.0367085
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0360109
SRRM2 serine/arginine repetitive matrix 2 0.0359018
CD47 CD47 molecule 0.0355542
RBM39 RNA binding motif protein 39 0.0354063
TRERF1 transcriptional regulating factor 1 0.0350679
SBF2 SET binding factor 2 0.0349616
RPS27A ribosomal protein S27a 0.0346394
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.0341745
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0340255
EBNA1BP2 EBNA1 binding protein 2 0.0329449
RPL13A ribosomal protein L13a 0.0324453
RPS3 ribosomal protein S3 0.0323994
BIRC6 baculoviral IAP repeat containing 6 0.0320555
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0317772
LDHA lactate dehydrogenase A 0.0307344
TGFBR3 transforming growth factor, beta receptor III 0.0306879
SMC3 structural maintenance of chromosomes 3 0.0306162
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0305605
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0305477
RPS12 ribosomal protein S12 0.0301037
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.0299649
LOXL3 lysyl oxidase-like 3 0.0292616
YBX1 Y box binding protein 1 0.0291743
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0288459
TBC1D5 TBC1 domain family, member 5 0.0287082
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.028629
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0285152
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0284624
COPA coatomer protein complex, subunit alpha 0.0282235
PDE10A phosphodiesterase 10A 0.0281922
GOLGA4 golgin A4 0.0281744
MYL12B myosin, light chain 12B, regulatory 0.0279216
RPS8 ribosomal protein S8 0.0278183
HDLBP high density lipoprotein binding protein 0.027714

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.128065
PDE4D phosphodiesterase 4D, cAMP-specific -0.067452
CCND1 cyclin D1 -0.0471425
RPS2 ribosomal protein S2 -0.0372481
RTN4 reticulon 4 -0.0367871
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0366514
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0348879
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0320757
BMP10 bone morphogenetic protein 10 -0.0284723
WSB1 WD repeat and SOCS box containing 1 -0.0275686
TXNRD1 thioredoxin reductase 1 -0.0273628
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0266682
TASOR2 transcription activation suppressor family member 2 -0.0266261
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0263749
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0260041
RPS6 ribosomal protein S6 -0.024592
NAMPT nicotinamide phosphoribosyltransferase -0.0244799
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.0227837
LOC112694756 uncharaterized LOC112694756 -0.0216112
HMGA1 high mobility group AT-hook 1 -0.02079
H1-4 H1.4 linker histone, cluster member -0.0204418
UBC ubiquitin C -0.0185962
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0176676
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0174959
IRS1 insulin receptor substrate 1 -0.0173034
KMT2E lysine (K)-specific methyltransferase 2E -0.0172963
SGMS2 sphingomyelin synthase 2 -0.0172823
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0172801
COMMD10 COMM domain containing 10 -0.0168955
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0167337
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0167288
SMNDC1 survival motor neuron domain containing 1 -0.0165848
MRTFA myocardin related transcription factor A -0.0162627
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0160968
S100A10 S100 calcium binding protein A10 -0.0156717
CARS1 cysteinyl-tRNA synthetase 1 -0.0155826
RPL38 ribosomal protein L38 -0.015578
DIAPH3 diaphanous-related formin 3 -0.0154755
FER fer (fps/fes related) tyrosine kinase -0.0154409
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 -0.0153164
RUSC2 RUN and SH3 domain containing 2 -0.0151456
ATN1 atrophin 1 -0.0151308
MEF2A myocyte enhancer factor 2A -0.014967
MFSD14A major facilitator superfamily domain containing 14A -0.0148827
RPL21 ribosomal protein L21 -0.0148157
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0147467
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0146924
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A -0.0144136
CREB5 cAMP responsive element binding protein 5 -0.0142177
ARL5B ADP-ribosylation factor-like 5B -0.0141668
CENPE centromere protein E, 312kDa -0.0141326
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0140827
TSC22D2 TSC22 domain family, member 2 -0.0140348
BRD2 bromodomain containing 2 -0.0137559
HEG1 heart development protein with EGF-like domains 1 -0.0137058
THBD thrombomodulin -0.0135234
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit -0.0133181
BRD4 bromodomain containing 4 -0.0130617
DIPK2A divergent protein kinase domain 2A -0.0129642
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0128855
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0127563
SPRY4 sprouty homolog 4 (Drosophila) -0.0125246
INO80 INO80 complex subunit -0.012511
S100A11 S100 calcium binding protein A11 -0.0124332
RPS15 ribosomal protein S15 -0.0122957
KDM6B lysine (K)-specific demethylase 6B -0.0122119
ZCCHC8 zinc finger, CCHC domain containing 8 -0.012092
SH3TC2 SH3 domain and tetratricopeptide repeats 2 -0.0120576
HJURP Holliday junction recognition protein -0.0119788
CAMTA1 calmodulin binding transcription activator 1 -0.011958
PPP4R2 protein phosphatase 4, regulatory subunit 2 -0.0118831
ATP5F1B ATP synthase F1 subunit beta -0.0118022
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0117585
HILPDA hypoxia inducible lipid droplet-associated -0.0117239
NDE1 nudE neurodevelopment protein 1 -0.0115923
ZNF608 zinc finger protein 608 -0.0115793
CLTC clathrin, heavy chain (Hc) -0.011504
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0114977
C1ORF52 chromosome 1 open reading frame 52 -0.0113675
LRRC58 leucine rich repeat containing 58 -0.0113503
MT2A metallothionein 2A -0.0113359
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0112867
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0112778
IPO11 importin 11 -0.0112505
NIPBL Nipped-B homolog (Drosophila) -0.011244
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0110762
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.011076
RUNX1 runt-related transcription factor 1 -0.0110667
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3 -0.0110644
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) -0.0109259
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0109182
NUP98 nucleoporin 98kDa -0.0108957
DHFR dihydrofolate reductase -0.0108288
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme -0.010799
JAK1 Janus kinase 1 -0.0107683
HSPA8 heat shock 70kDa protein 8 -0.0105699
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa -0.0105675
TRA2B transformer 2 beta homolog (Drosophila) -0.0105246
RASAL2 RAS protein activator like 2 -0.0105193
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0105182