Ivabradine (hydrochloride)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ivabradine (hydrochloride) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ivabradine (hydrochloride)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.173203
FN1 fibronectin 1 0.113201
UGCG UDP-glucose ceramide glucosyltransferase 0.110472
PLIN2 perilipin 2 0.100395
AHNAK AHNAK nucleoprotein 0.0994858
FTH1 ferritin, heavy polypeptide 1 0.0954134
ENO1 enolase 1, (alpha) 0.0932984
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0930319
PGK1 phosphoglycerate kinase 1 0.090683
NAMPT nicotinamide phosphoribosyltransferase 0.0880089
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0837362
BASP1 brain abundant, membrane attached signal protein 1 0.0769108
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0653296
VCAN versican 0.0620634
COL6A3 collagen, type VI, alpha 3 0.0614177
ACTG1 actin gamma 1 0.0597318
LDHA lactate dehydrogenase A 0.059488
PARP14 poly (ADP-ribose) polymerase family, member 14 0.057717
C3 complement component 3 0.055814
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0536464
MYH9 myosin, heavy chain 9, non-muscle 0.0525584
RPL23 ribosomal protein L23 0.0521917
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0514682
ZMYND8 zinc finger, MYND-type containing 8 0.0495876
EIF4A1 eukaryotic translation initiation factor 4A1 0.0489448
RPS3 ribosomal protein S3 0.0472403
TMSB4X thymosin beta 4, X-linked 0.0456264
YBX1 Y box binding protein 1 0.0455746
PTMA prothymosin, alpha 0.045265
ANXA2 annexin A2 0.04517
CSDE1 cold shock domain containing E1, RNA-binding 0.0443228
RNF213 ring finger protein 213 0.0440632
HLA-B major histocompatibility complex, class I, B 0.0440169
CADM1 cell adhesion molecule 1 0.0438575
RPL4 ribosomal protein L4 0.0431555
EEF2 eukaryotic translation elongation factor 2 0.042806
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0425271
TPM4 tropomyosin 4 0.0419212
EXT1 exostosin glycosyltransferase 1 0.0413263
IFI6 interferon, alpha-inducible protein 6 0.0397697
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0397084
PABPC1 poly(A) binding protein, cytoplasmic 1 0.038802
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0386847
RPS12 ribosomal protein S12 0.0370311
CALR calreticulin 0.0366369
RAI1 retinoic acid induced 1 0.0363928
NPEPPS aminopeptidase puromycin sensitive 0.0361369
PCBP2 poly(rC) binding protein 2 0.0360926
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0354961
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0352491
COL1A2 collagen, type I, alpha 2 0.0351906
THBS2 thrombospondin 2 0.0350207
FBXO32 F-box protein 32 0.033912
SDC4 syndecan 4 0.0332498
RB1CC1 RB1-inducible coiled-coil 1 0.0331364
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0330663
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0329536
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.032792
RPS4X ribosomal protein S4, X-linked 0.0326997
IFITM1 interferon induced transmembrane protein 1 0.0318771
FAM20C family with sequence similarity 20, member C 0.0309966
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0308932
THBS1 thrombospondin 1 0.0300833
ZNF292 zinc finger protein 292 0.0299959
EIF4B eukaryotic translation initiation factor 4B 0.0296051
ITM2B integral membrane protein 2B 0.0289231
APP amyloid beta (A4) precursor protein 0.0287787
B2M beta-2-microglobulin 0.0287031
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0282887
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0278297
TXNIP thioredoxin interacting protein 0.0277804
ADAR adenosine deaminase, RNA-specific 0.0272568
FLNB filamin B, beta 0.027138
APLP2 amyloid beta (A4) precursor-like protein 2 0.0265454
HLA-A major histocompatibility complex, class I, A 0.0261614
RPL3 ribosomal protein L3 0.0253305
SQSTM1 sequestosome 1 0.0250573
THRAP3 thyroid hormone receptor associated protein 3 0.0247653
FTL ferritin, light polypeptide 0.0246391
POTEF POTE ankyrin domain family, member F 0.0245343
RPL37A ribosomal protein L37a 0.0240902
RPS20 ribosomal protein S20 0.0240685
MXI1 MAX interactor 1, dimerization protein 0.023999
USP9X ubiquitin specific peptidase 9, X-linked 0.0235962
RPL35A ribosomal protein L35a 0.0233141
IFITM3 interferon induced transmembrane protein 3 0.0230732
MMP2 matrix metallopeptidase 2 0.0228525
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0227534
GBP2 guanylate binding protein 2, interferon-inducible 0.0222812
MCL1 myeloid cell leukemia 1 0.0221365
DENND5A DENN/MADD domain containing 5A 0.0220013
LOC102724023 ES1 protein homolog, mitochondrial 0.0216963
CDC27 cell division cycle 27 0.0212538
PRELID2 PRELI domain containing 2 0.0208125
ENO2 enolase 2 (gamma, neuronal) 0.0208081
FOSL1 FOS-like antigen 1 0.0207799
LIMA1 LIM domain and actin binding 1 0.0207139
BZW1 basic leucine zipper and W2 domains 1 0.0207011
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0206461
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0205944

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.167441
SPAG9 sperm associated antigen 9 -0.0898357
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0892116
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.088404
CD44 CD44 molecule (Indian blood group) -0.0806345
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0802081
NAV2 neuron navigator 2 -0.0794843
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0762836
MSN moesin -0.0762452
RPS6 ribosomal protein S6 -0.0748514
VCL vinculin -0.0737566
TRIO trio Rho guanine nucleotide exchange factor -0.0722302
RPS2 ribosomal protein S2 -0.0718089
SLC38A2 solute carrier family 38, member 2 -0.0703526
FRMD4A FERM domain containing 4A -0.0687609
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0666771
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0654074
HMGA2 high mobility group AT-hook 2 -0.063572
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0633347
INTS6 integrator complex subunit 6 -0.0622879
ZSWIM6 zinc finger, SWIM-type containing 6 -0.062152
CDH13 cadherin 13 -0.0605585
TGFBI transforming growth factor, beta-induced, 68kDa -0.0559742
GPC6 glypican 6 -0.053757
CLTC clathrin, heavy chain (Hc) -0.0529765
BICC1 BicC family RNA binding protein 1 -0.0522504
KYNU kynureninase -0.0510723
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0489977
NABP1 nucleic acid binding protein 1 -0.0484482
MORF4L2 mortality factor 4 like 2 -0.04823
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0475654
JMJD1C jumonji domain containing 1C -0.0469841
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0469637
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0464449
AKAP12 A kinase (PRKA) anchor protein 12 -0.0456316
ELL2 elongation factor, RNA polymerase II, 2 -0.0444816
PDE10A phosphodiesterase 10A -0.043855
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0436309
NDRG1 N-myc downstream regulated 1 -0.0436018
GLIS3 GLIS family zinc finger 3 -0.0433472
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0427377
ADAM12 ADAM metallopeptidase domain 12 -0.0424312
IER3 immediate early response 3 -0.0416274
GOLGA4 golgin A4 -0.0412227
GOLGB1 golgin B1 -0.0408431
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.04058
KMT2E lysine (K)-specific methyltransferase 2E -0.0390067
RAB7A RAB7A, member RAS oncogene family -0.0389871
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0384255
STC1 stanniocalcin 1 -0.0376041
TAOK1 TAO kinase 1 -0.0375227
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0373822
RHOBTB3 Rho-related BTB domain containing 3 -0.0373605
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0373438
RPS24 ribosomal protein S24 -0.0370402
NAV1 neuron navigator 1 -0.0369008
SNX9 sorting nexin 9 -0.0368783
TMEM132D transmembrane protein 132D -0.0366929
PPARD peroxisome proliferator-activated receptor delta -0.0366319
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0363358
FNIP1 folliculin interacting protein 1 -0.0361744
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0360387
SEPTIN9 septin 9 -0.0357974
UBC ubiquitin C -0.0356772
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0353385
SMYD3 SET and MYND domain containing 3 -0.0353336
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0351639
IGFBP3 insulin-like growth factor binding protein 3 -0.0351371
ZBTB38 zinc finger and BTB domain containing 38 -0.0350867
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0343876
FBXL7 F-box and leucine-rich repeat protein 7 -0.0342054
SDK1 sidekick cell adhesion molecule 1 -0.0339061
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0338852
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.033713
VMP1 vacuole membrane protein 1 -0.0331541
RBM39 RNA binding motif protein 39 -0.033047
RPL38 ribosomal protein L38 -0.0324641
LAMP2 lysosomal-associated membrane protein 2 -0.0323963
FMN1 formin 1 -0.0323626
FUS FUS RNA binding protein -0.0321801
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0320976
TAPBP TAP binding protein (tapasin) -0.0315714
EGFR epidermal growth factor receptor -0.0313983
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0310022
PRKCA protein kinase C, alpha -0.0307947
MAP1B microtubule-associated protein 1B -0.0307024
CTSD cathepsin D -0.0306341
ARHGAP5 Rho GTPase activating protein 5 -0.0305529
PALLD palladin, cytoskeletal associated protein -0.0302296
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0296698
EFNA5 ephrin-A5 -0.0296616
ZFAND3 zinc finger, AN1-type domain 3 -0.0295959
FBXO11 F-box protein 11 -0.0294683
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0290501
KLHL24 kelch-like family member 24 -0.0290175
TPT1 tumor protein, translationally-controlled 1 -0.028897
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0284146
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0279142
ANO6 anoctamin 6 -0.0276887
KTN1 kinectin 1 (kinesin receptor) -0.0276329