Ixazomib citrate_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ixazomib citrate perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ixazomib citrate_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.127567
RPS3 ribosomal protein S3 0.0640348
SFTPA2 surfactant protein A2 0.0606582
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0509942
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0509812
TM4SF1 transmembrane 4 L six family member 1 0.0415689
SLC39A11 solute carrier family 39, member 11 0.0381474
FMNL2 formin-like 2 0.0368893
ELL2 elongation factor, RNA polymerase II, 2 0.036756
GOLGA4 golgin A4 0.0344225
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0343652
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0338367
PGK1 phosphoglycerate kinase 1 0.0331792
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0323338
EIF4A2 eukaryotic translation initiation factor 4A2 0.0320983
CANX calnexin 0.0319208
KAZN kazrin, periplakin interacting protein 0.0313596
MSN moesin 0.031045
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0307099
PEX5L peroxisomal biogenesis factor 5-like 0.0302689
CXCL8 chemokine (C-X-C motif) ligand 8 0.030178
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0294951
PCLO piccolo presynaptic cytomatrix protein 0.0293761
CTSB cathepsin B 0.029198
DSCAM Down syndrome cell adhesion molecule 0.0291218
CCDC47 coiled-coil domain containing 47 0.0286696
HSPA8 heat shock 70kDa protein 8 0.0285197
ARRDC3 arrestin domain containing 3 0.0282346
ESYT2 extended synaptotagmin-like protein 2 0.0279124
CHD1 chromodomain helicase DNA binding protein 1 0.0275417
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0272907
VMP1 vacuole membrane protein 1 0.0267721
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0267658
MYH9 myosin, heavy chain 9, non-muscle 0.0263965
PMM2 phosphomannomutase 2 0.0259884
TPM3 tropomyosin 3 0.0244897
SERINC1 serine incorporator 1 0.0243176
PTMA prothymosin, alpha 0.0239238
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0235204
RB1CC1 RB1-inducible coiled-coil 1 0.0232598
ENO1 enolase 1, (alpha) 0.0229956
KTN1 kinectin 1 (kinesin receptor) 0.02288
ANGPTL4 angiopoietin-like 4 0.0228327
CORO1C coronin, actin binding protein, 1C 0.0226688
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0222269
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.022115
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0220278
MT2A metallothionein 2A 0.0219845
CTTN cortactin 0.0215219
GPR137B G protein-coupled receptor 137B 0.0214621
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 0.0213228
RPL14 ribosomal protein L14 0.0211822
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0210718
NGLY1 N-glycanase 1 0.0209929
NCKAP1 NCK-associated protein 1 0.0209608
ECPAS Ecm29 proteasome adaptor and scaffold 0.0207257
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0207046
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0205145
EZR ezrin 0.0205097
CEP250 centrosomal protein 250kDa 0.0202622
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0201498
FLNB filamin B, beta 0.0201432
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0200032
ADAM17 ADAM metallopeptidase domain 17 0.0198831
SET SET nuclear proto-oncogene 0.0198578
ERRFI1 ERBB receptor feedback inhibitor 1 0.0198158
YBX3 Y box binding protein 3 0.0196821
SOD2 superoxide dismutase 2, mitochondrial 0.0196106
AFDN afadin, adherens junction formation factor 0.0195987
AHNAK AHNAK nucleoprotein 0.0193571
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0193179
CD44 CD44 molecule (Indian blood group) 0.0191885
GOLGB1 golgin B1 0.019188
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0191822
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0191209
GARS1 glycyl-tRNA synthetase 1 0.0187947
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0186796
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0186017
CLINT1 clathrin interactor 1 0.0181785
MT1X metallothionein 1X 0.0181759
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.018149
VCL vinculin 0.018109
CALD1 caldesmon 1 0.0179049
KDM3A lysine (K)-specific demethylase 3A 0.0177917
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 0.0177603
MACF1 microtubule-actin crosslinking factor 1 0.0175989
SENP5 SUMO1/sentrin specific peptidase 5 0.0175385
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0174543
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0173786
BCAP31 B-cell receptor-associated protein 31 0.0173437
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0171563
MAP2K1 mitogen-activated protein kinase kinase 1 0.017062
PCBP3 poly(rC) binding protein 3 0.0170358
IQGAP1 IQ motif containing GTPase activating protein 1 0.016939
CLTC clathrin, heavy chain (Hc) 0.0167827
ACO2 aconitase 2, mitochondrial 0.016775
RTN4 reticulon 4 0.0167443
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0166909
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 0.0166402
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0165511

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.236199
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.209958
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.171519
NLGN1 neuroligin 1 -0.135664
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0847508
VIM vimentin -0.0744335
NRG3 neuregulin 3 -0.0724683
FMN1 formin 1 -0.0715442
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0651655
CCND1 cyclin D1 -0.0545128
HSPB1 heat shock 27kDa protein 1 -0.0542863
LSAMP limbic system-associated membrane protein -0.05175
FNDC3B fibronectin type III domain containing 3B -0.0483658
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.047709
FTL ferritin, light polypeptide -0.0457661
ZBTB20 zinc finger and BTB domain containing 20 -0.045375
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0453318
PKM pyruvate kinase, muscle -0.044634
MAML3 mastermind-like 3 (Drosophila) -0.0446259
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0418746
FRMD5 FERM domain containing 5 -0.041135
RAD51B RAD51 paralog B -0.0396917
SOX6 SRY (sex determining region Y)-box 6 -0.0395797
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0369112
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0365167
LINGO2 leucine rich repeat and Ig domain containing 2 -0.034274
VDAC1 voltage-dependent anion channel 1 -0.0340726
MAML2 mastermind-like 2 (Drosophila) -0.0339684
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0339652
HMGA1 high mobility group AT-hook 1 -0.0327924
MACROD2 MACRO domain containing 2 -0.0310996
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0306255
FBXL17 F-box and leucine-rich repeat protein 17 -0.0304298
RUNX1 runt-related transcription factor 1 -0.0301551
TBC1D5 TBC1 domain family, member 5 -0.0282633
CDH13 cadherin 13 -0.0280166
FRMD4A FERM domain containing 4A -0.0277431
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0273755
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0272523
FHIT fragile histidine triad -0.0269998
RNF213 ring finger protein 213 -0.0258513
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0255808
HSPA1B heat shock 70kDa protein 1B -0.0252991
CADM1 cell adhesion molecule 1 -0.0251454
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0248463
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0248039
CDK6 cyclin-dependent kinase 6 -0.0246985
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0246266
EHBP1 EH domain binding protein 1 -0.024531
UBC ubiquitin C -0.0240669
DLG1 discs, large homolog 1 (Drosophila) -0.0234792
FXR1 fragile X mental retardation, autosomal homolog 1 -0.023462
WDPCP WD repeat containing planar cell polarity effector -0.0234495
LINC02798 long intergenic non-protein coding RNA 2798 -0.0234387
BCAS3 breast carcinoma amplified sequence 3 -0.0233317
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 -0.0233007
EEF2 eukaryotic translation elongation factor 2 -0.0228745
LRMDA leucine rich melanocyte differentiation associated -0.0227679
SOX5 SRY (sex determining region Y)-box 5 -0.0225977
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.0225625
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0225292
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0225206
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0218286
BPTF bromodomain PHD finger transcription factor -0.0216758
CYB5R3 cytochrome b5 reductase 3 -0.0216455
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0216038
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0207682
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0206453
TSC22D2 TSC22 domain family, member 2 -0.0205791
CRYAB crystallin, alpha B -0.0203979
ERBIN erbb2 interacting protein -0.0201911
ARB2A ARB2 cotranscriptional regulator A -0.0201824
CCDC91 coiled-coil domain containing 91 -0.0201453
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0200402
HSPA1A heat shock 70kDa protein 1A -0.0199224
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0198373
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0196841
CLEC2D C-type lectin domain family 2, member D -0.0194078
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.0188536
SMC4 structural maintenance of chromosomes 4 -0.0187068
LPP LIM domain containing preferred translocation partner in lipoma -0.0182052
NRXN3 neurexin 3 -0.018122
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0180149
LDLRAD3 low density lipoprotein receptor class A domain containing 3 -0.0179906
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0177353
AUTS2 autism susceptibility candidate 2 -0.0176899
NF1 neurofibromin 1 -0.0175962
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0175869
SLC38A1 solute carrier family 38, member 1 -0.0175713
RPLP1 ribosomal protein, large, P1 -0.0174223
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 -0.0173754
SOX10 SRY (sex determining region Y)-box 10 -0.0172327
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.017145
COMMD10 COMM domain containing 10 -0.0169539
MBNL1 muscleblind-like splicing regulator 1 -0.0169468
NPAS2 neuronal PAS domain protein 2 -0.0169206
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0169104
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0168398
RABGAP1L RAB GTPase activating protein 1-like -0.0168076
ANKRD28 ankyrin repeat domain 28 -0.0164584