KARPAS-1106P Gene Set
Genes
30 genes with high or low copy number in KARPAS-1106P relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
PVT1
|
Pvt1 oncogene (non-protein coding)
|
2.04585
|
low copy number
| Symbol |
Name |
Standardized Value |
|
IGSF3
|
immunoglobulin superfamily, member 3
|
-3.36169
|
|
CD58
|
CD58 molecule
|
-3.36169
|
|
MIR648
|
microRNA 648
|
-3.29865
|
|
LITAF
|
lipopolysaccharide-induced TNF factor
|
-3.2703
|
|
CIITA
|
class II, major histocompatibility complex, transactivator
|
-3.24687
|
|
TVP23A
|
trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
|
-3.24687
|
|
LRP5L
|
low density lipoprotein receptor-related protein 5-like
|
-3.15179
|
|
CRYBB2P1
|
crystallin, beta B2 pseudogene 1
|
-3.14331
|
|
PRM2
|
protamine 2
|
-3.11641
|
|
SOCS1
|
suppressor of cytokine signaling 1
|
-3.11641
|
|
RMI2
|
RecQ mediated genome instability 2
|
-3.11641
|
|
PRM3
|
protamine 3
|
-3.11641
|
|
PRM1
|
protamine 1
|
-3.11641
|
|
TNP2
|
transition protein 2 (during histone to protamine replacement)
|
-3.11641
|
|
CLEC16A
|
C-type lectin domain family 16, member A
|
-3.11641
|
|
TP73
|
tumor protein p73
|
-2.99615
|
|
ZNF280A
|
zinc finger protein 280A
|
-2.87511
|
|
ZNF280B
|
zinc finger protein 280B
|
-2.87511
|
|
LOC648691
|
|
-2.86885
|
|
PRAME
|
preferentially expressed antigen in melanoma
|
-2.86885
|
|
ELK2AP
|
ELK2A, member of ETS oncogene family, pseudogene
|
-2.86885
|
|
GGTLC2
|
gamma-glutamyltransferase light chain 2
|
-2.8682
|
|
POM121L1P
|
POM121 transmembrane nucleoporin-like 1, pseudogene
|
-2.8682
|
|
BCR
|
breakpoint cluster region
|
-2.86497
|
|
POTEB
|
POTE ankyrin domain family, member B
|
-2.8542
|
|
NF1P2
|
neurofibromin 1 pseudogene 2
|
-2.8542
|
|
NBEAP1
|
neurobeachin pseudogene 1
|
-2.8542
|
|
IGHG1
|
immunoglobulin heavy constant gamma 1 (G1m marker)
|
-2.84154
|
|
MIR650
|
microRNA 650
|
-2.83656
|
