KARPAS-231 Gene Set
Genes
21 genes with high or low copy number in KARPAS-231 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
LINC00938
|
long intergenic non-protein coding RNA 938
|
2.09161
|
|
SLC38A2
|
solute carrier family 38, member 2
|
2.09161
|
|
SCAF11
|
SR-related CTD-associated factor 11
|
2.09161
|
|
ARID2
|
AT rich interactive domain 2 (ARID, RFX-like)
|
2.09161
|
|
SLC38A1
|
solute carrier family 38, member 1
|
2.09117
|
|
SLC38A4
|
solute carrier family 38, member 4
|
2.09073
|
low copy number
| Symbol |
Name |
Standardized Value |
|
IGLL5
|
immunoglobulin lambda-like polypeptide 5
|
-2.95871
|
|
ZNF280A
|
zinc finger protein 280A
|
-2.87511
|
|
ZNF280B
|
zinc finger protein 280B
|
-2.87511
|
|
PRAME
|
preferentially expressed antigen in melanoma
|
-2.86885
|
|
LOC648691
|
|
-2.86885
|
|
POM121L1P
|
POM121 transmembrane nucleoporin-like 1, pseudogene
|
-2.8682
|
|
GGTLC2
|
gamma-glutamyltransferase light chain 2
|
-2.8682
|
|
BCR
|
breakpoint cluster region
|
-2.86497
|
|
OR2T34
|
olfactory receptor, family 2, subfamily T, member 34
|
-2.84792
|
|
MIR650
|
microRNA 650
|
-2.83656
|
|
TRDC
|
T cell receptor delta constant
|
-2.80776
|
|
OR2T11
|
olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene)
|
-2.78432
|
|
OR2T10
|
olfactory receptor, family 2, subfamily T, member 10
|
-2.78237
|
|
CFHR3
|
complement factor H-related 3
|
-2.76621
|
|
CFHR1
|
complement factor H-related 1
|
-2.76621
|
