KARPAS-299 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from T-Cell Non-Hodgkin's Lymphoma Tumour (Cell Model Passports, SIDM01010)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01010
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Genes

194 proteins associated with the cell line KARPAS-299 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AKAP2 A kinase (PRKA) anchor protein 2
AKAP8L A kinase (PRKA) anchor protein 8-like
ALDOC aldolase C, fructose-bisphosphate
ALK anaplastic lymphoma receptor tyrosine kinase
ANKZF1 ankyrin repeat and zinc finger domain containing 1
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1
BCL7B B-cell CLL/lymphoma 7B
CALCOCO2 calcium binding and coiled-coil domain 2
CAMK4 calcium/calmodulin-dependent protein kinase IV
CARD8 caspase recruitment domain family, member 8
CCDC25 coiled-coil domain containing 25
CCDC9 coiled-coil domain containing 9
CEP295NL CEP295 N-terminal like
CEP350 centrosomal protein 350kDa
CLU clusterin
CSPG4 chondroitin sulfate proteoglycan 4
CTSL cathepsin L
DRG2 developmentally regulated GTP binding protein 2
EFR3A EFR3 homolog A (S. cerevisiae)
ERI1 exoribonuclease 1
FLOT1 flotillin 1
FLYWCH2 FLYWCH family member 2
FNBP4 formin binding protein 4
GALM galactose mutarotase (aldose 1-epimerase)
GATAD2A GATA zinc finger domain containing 2A
GSDMD gasdermin D
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
JUNB jun B proto-oncogene
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KCTD5 potassium channel tetramerization domain containing 5
KDSR 3-ketodihydrosphingosine reductase
KIAA1522 KIAA1522
KIF2C kinesin family member 2C
LIMD1 LIM domains containing 1
LUC7L LUC7-like (S. cerevisiae)
MCL1 myeloid cell leukemia 1
MED4 mediator complex subunit 4
MKRN2 makorin ring finger protein 2
MPG N-methylpurine-DNA glycosylase
MSRB2 methionine sulfoxide reductase B2
NAMPT nicotinamide phosphoribosyltransferase
NDE1 nudE neurodevelopment protein 1
NUP160 nucleoporin 160kDa
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OSBPL11 oxysterol binding protein-like 11
PAH phenylalanine hydroxylase
PDE4DIP phosphodiesterase 4D interacting protein
PHF5A PHD finger protein 5A
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
PRCC papillary renal cell carcinoma (translocation-associated)
PRMT3 protein arginine methyltransferase 3
PRPF3 pre-mRNA processing factor 3
PRRC2B proline-rich coiled-coil 2B
PUM2 pumilio RNA-binding family member 2
RAB27A RAB27A, member RAS oncogene family
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RMI2 RecQ mediated genome instability 2
RNF181 ring finger protein 181
RNF213 ring finger protein 213
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RPS19P3 ribosomal protein S19 pseudogene 3
SELENBP1 selenium binding protein 1
SF3B4 splicing factor 3b, subunit 4, 49kDa
SHKBP1 SH3KBP1 binding protein 1
SMAP2 small ArfGAP2
SNX27 sorting nexin family member 27
SRRM2 serine/arginine repetitive matrix 2
STAT1 signal transducer and activator of transcription 1, 91kDa
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
STX11 syntaxin 11
SULF2 sulfatase 2
SYF2 SYF2 pre-mRNA-splicing factor
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TDRKH tudor and KH domain containing
TECPR2 tectonin beta-propeller repeat containing 2
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4)
THUMPD1 THUMP domain containing 1
TIMP1 TIMP metallopeptidase inhibitor 1
TLE3 transducin-like enhancer of split 3
TMCO3 transmembrane and coiled-coil domains 3
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNS3 tensin 3
TOM1L2 target of myb1-like 2 (chicken)
TSLIG2 tRNA splicing ligase complex subunit 2
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
USP32 ubiquitin specific peptidase 32
WRNIP1 Werner helicase interacting protein 1
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
ZC3H4 zinc finger CCCH-type containing 4
ZNF598 zinc finger protein 598
ZNF830 zinc finger protein 830
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase

Symbol Name
ACTR10 actin-related protein 10 homolog (S. cerevisiae)
AP1S2 adaptor-related protein complex 1, sigma 2 subunit
APOOL apolipoprotein O-like
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1
ARMCX3 armadillo repeat containing, X-linked 3
ATG2B autophagy related 2B
BAG5 BCL2-associated athanogene 5
BASP1 brain abundant, membrane attached signal protein 1
BAZ2A bromodomain adjacent to zinc finger domain, 2A
CCDC170 coiled-coil domain containing 170
CCDC88A coiled-coil domain containing 88A
CD86 CD86 molecule
CDH3 cadherin 3, type 1, P-cadherin (placental)
COIL coilin
CUTC cutC copper transporter
CWC22 CWC22 spliceosome-associated protein
CYB5R1 cytochrome b5 reductase 1
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)
DAGLB diacylglycerol lipase, beta
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DLAT dihydrolipoamide S-acetyltransferase
DUSP12 dual specificity phosphatase 12
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
ELF2 E74-like factor 2 (ets domain transcription factor)
EMG1 EMG1 N1-specific pseudouridine methyltransferase
EPB41L2 erythrocyte membrane protein band 4.1-like 2
ERGIC2 ERGIC and golgi 2
ESYT2 extended synaptotagmin-like protein 2
FDX1 ferredoxin 1
FKBP10 FK506 binding protein 10, 65 kDa
GHRH growth hormone releasing hormone
GSK3A glycogen synthase kinase 3 alpha
GYS1 glycogen synthase 1 (muscle)
HACL1 2-hydroxyacyl-CoA lyase 1
HS2ST1 heparan sulfate 2-O-sulfotransferase 1
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3
ITK IL2-inducible T-cell kinase
KIF1C kinesin family member 1C
LLGL2 lethal giant larvae homolog 2 (Drosophila)
LOC105374608 uncharacterized LOC105374608
LONP2 lon peptidase 2, peroxisomal
MANBAL mannosidase, beta A, lysosomal-like
MED11 mediator complex subunit 11
MED29 mediator complex subunit 29
MTCH1 mitochondrial carrier 1
MTERF3 mitochondrial transcription termination factor 3
MTFR1 mitochondrial fission regulator 1
MYDGF myeloid-derived growth factor
MYO1E myosin IE
MYOF myoferlin
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)
NELFB negative elongation factor complex member B
NMNAT1 nicotinamide nucleotide adenylyltransferase 1
NYX nyctalopin
OR4A7P olfactory receptor, family 4, subfamily A, member 7 pseudogene
PCLO piccolo presynaptic cytomatrix protein
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PER1 period circadian clock 1
PHGDH phosphoglycerate dehydrogenase
PHLDB1 pleckstrin homology-like domain, family B, member 1
PNPO pyridoxamine 5'-phosphate oxidase
POLR1B polymerase (RNA) I polypeptide B, 128kDa
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa
PPP4R1 protein phosphatase 4, regulatory subunit 1
PRDX3 peroxiredoxin 3
PRDX4 peroxiredoxin 4
RAB2A RAB2A, member RAS oncogene family
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RTN4IP1 reticulon 4 interacting protein 1
SAMD4B sterile alpha motif domain containing 4B
SARDH sarcosine dehydrogenase
SCFD2 sec1 family domain containing 2
SDF2 stromal cell-derived factor 2
SDR39U1 short chain dehydrogenase/reductase family 39U, member 1
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
SLC25A46 solute carrier family 25, member 46
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma)
STRIP1 striatin interacting protein 1
SUMF2 sulfatase modifying factor 2
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TKFC triokinase/FMN cyclase
TMPPE transmembrane protein with metallophosphoesterase domain
TPRN taperin
TSC2 tuberous sclerosis 2
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
UBL7 ubiquitin-like 7
VCL vinculin
VDAC2 voltage-dependent anion channel 2
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
WDFY1 WD repeat and FYVE domain containing 1
ZNF292 zinc finger protein 292