KARPAS-422 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from B-Cell Non-Hodgkin's Lymphoma Metastasis (Cell Model Passports, SIDM01008)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01008
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Genes

197 proteins associated with the cell line KARPAS-422 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
ACAT1 acetyl-CoA acetyltransferase 1
ACLY ATP citrate lyase
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADSL adenylosuccinate lyase
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
ARFIP1 ADP-ribosylation factor interacting protein 1
ASF1A anti-silencing function 1A histone chaperone
ASMTL acetylserotonin O-methyltransferase-like
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1
CDC40 cell division cycle 40
CDV3 CDV3 homolog (mouse)
CHD3 chromodomain helicase DNA binding protein 3
CHMP4A charged multivesicular body protein 4A
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CREG1 cellular repressor of E1A-stimulated genes 1
CRLF3 cytokine receptor-like factor 3
CSK c-src tyrosine kinase
CWC15 CWC15 spliceosome-associated protein
DCK deoxycytidine kinase
DHRS11 dehydrogenase/reductase (SDR family) member 11
DHRS4 dehydrogenase/reductase (SDR family) member 4
DNLZ DNL-type zinc finger
EED embryonic ectoderm development
EIF1 eukaryotic translation initiation factor 1
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
ELAC2 elaC ribonuclease Z 2
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
FOXP1 forkhead box P1
GCH1 GTP cyclohydrolase 1
GEMIN8 gem (nuclear organelle) associated protein 8
GM2A GM2 ganglioside activator
GMPR2 guanosine monophosphate reductase 2
GRHPR glyoxylate reductase/hydroxypyruvate reductase
GTF2B general transcription factor IIB
HDDC2 HD domain containing 2
HK2 hexokinase 2
HSPH1 heat shock 105kDa/110kDa protein 1
IFT122 intraflagellar transport 122
IRF3 interferon regulatory factor 3
ISG15 ISG15 ubiquitin-like modifier
ITSN2 intersectin 2
LAP3 leucine aminopeptidase 3
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAP2K3 mitogen-activated protein kinase kinase 3
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MCDR3 macular dystrophy, retinal 3
MDP1 magnesium-dependent phosphatase 1
METAP1 methionyl aminopeptidase 1
METAP2 methionyl aminopeptidase 2
MROH2B maestro heat-like repeat family member 2B
MTA3 metastasis associated 1 family, member 3
MX1 MX dynamin-like GTPase 1
NEK9 NIMA-related kinase 9
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NIT2 nitrilase family, member 2
NTF3 neurotrophin 3
PFAS phosphoribosylformylglycinamidine synthase
PIH1D1 PIH1 domain containing 1
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific)
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PNO1 partner of NOB1 homolog (S. cerevisiae)
PNRC1 proline-rich nuclear receptor coactivator 1
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
POU2AF1 POU class 2 associating factor 1
PPID peptidylprolyl isomerase D
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PRKCD protein kinase C, delta
PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PTPRF protein tyrosine phosphatase, receptor type, F
PYGL phosphorylase, glycogen, liver
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RBM27 RNA binding motif protein 27
RPAP3 RNA polymerase II associated protein 3
RPIA ribose 5-phosphate isomerase A
RUVBL2 RuvB-like AAA ATPase 2
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
STAT5B signal transducer and activator of transcription 5B
STK4 serine/threonine kinase 4
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
SWAP70 SWAP switching B-cell complex 70kDa subunit
TBCC tubulin folding cofactor C
TOP1 topoisomerase (DNA) I
TPRKB TP53RK binding protein
TRAFD1 TRAF-type zinc finger domain containing 1
TRIM22 tripartite motif containing 22
TRMT5 tRNA methyltransferase 5
TUBB3 tubulin, beta 3 class III
VRK1 vaccinia related kinase 1
VRK3 vaccinia related kinase 3
WDR77 WD repeat domain 77
ZC3H12D zinc finger CCCH-type containing 12D
ZHX2 zinc fingers and homeoboxes 2

Symbol Name
ACTA1 actin, alpha 1, skeletal muscle
ANXA2 annexin A2
AP2M1 adaptor-related protein complex 2, mu 1 subunit
AP2S1 adaptor-related protein complex 2, sigma 1 subunit
ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
BCKDK branched chain ketoacid dehydrogenase kinase
BLVRA biliverdin reductase A
BUD13 BUD13 homolog (S. cerevisiae)
C1ORF50 chromosome 1 open reading frame 50
CDC50A cell division cycle 50 P4-ATPase accessory subunit A
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CHD1 chromodomain helicase DNA binding protein 1
CIZ1 CDKN1A interacting zinc finger protein 1
CLPTM1L CLPTM1-like
CORO1C coronin, actin binding protein, 1C
CPOX coproporphyrinogen oxidase
DAAM1 dishevelled associated activator of morphogenesis 1
DCAKD dephospho-CoA kinase domain containing
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
ERLIN1 ER lipid raft associated 1
ETHE1 ethylmalonic encephalopathy 1
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial
FGFRL1 fibroblast growth factor receptor-like 1
G6PC3 glucose 6 phosphatase, catalytic, 3
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2
GID8 GID complex subunit 8
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GNAS GNAS complex locus
GPR179 G protein-coupled receptor 179
GPSM1 G-protein signaling modulator 1
GPX1 glutathione peroxidase 1
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HSPB1 heat shock 27kDa protein 1
HYOU1 hypoxia up-regulated 1
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
INTS1 integrator complex subunit 1
JAG1 jagged 1
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2
KIF13B kinesin family member 13B
KIF1BP KIF1 binding protein
LIN7C lin-7 homolog C (C. elegans)
LINC00919 long intergenic non-protein coding RNA 919
LMNA lamin A/C
LOC105376613 uncharacterized LOC105376613
LUZP1 leucine zipper protein 1
MPDU1 mannose-P-dolichol utilization defect 1
MPDZ multiple PDZ domain protein
MRPL32 mitochondrial ribosomal protein L32
MYO19 myosin XIX
MYO1C myosin IC
NCOR2 nuclear receptor corepressor 2
NMNAT1 nicotinamide nucleotide adenylyltransferase 1
NRG1 neuregulin 1
OLFM4 olfactomedin 4
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PARP4 poly (ADP-ribose) polymerase family, member 4
PCCA propionyl CoA carboxylase, alpha polypeptide
PHGDH phosphoglycerate dehydrogenase
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PIGO phosphatidylinositol glycan anchor biosynthesis, class O
PKN2 protein kinase N2
PLEKHO2 pleckstrin homology domain containing, family O member 2
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PLP2 proteolipid protein 2 (colonic epithelium-enriched)
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PRPH peripherin
PRTFDC1 phosphoribosyl transferase domain containing 1
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1
PTMS parathymosin
RALB v-ral simian leukemia viral oncogene homolog B
RMI1 RecQ mediated genome instability 1
RRAS related RAS viral (r-ras) oncogene homolog
S100A6 S100 calcium binding protein A6
SEC61B Sec61 beta subunit
SIRT5 sirtuin 5
SLC38A1 solute carrier family 38, member 1
SLIT1 slit homolog 1 (Drosophila)
SP3 Sp3 transcription factor
SPTAN1 spectrin, alpha, non-erythrocytic 1
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma)
STK3 serine/threonine kinase 3
TADA1 transcriptional adaptor 1
TBC1D10B TBC1 domain family, member 10B
TBC1D20 TBC1 domain family, member 20
TEX14 testis expressed 14
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast)
TM9SF3 transmembrane 9 superfamily member 3
TMEM132A transmembrane protein 132A
TMOD3 tropomodulin 3 (ubiquitous)
TMTC3 transmembrane and tetratricopeptide repeat containing 3
TNIP1 TNFAIP3 interacting protein 1
WDPCP WD repeat containing planar cell polarity effector
WDR11 WD repeat domain 11
ZMYM4 zinc finger, MYM-type 4
ZNF579 zinc finger protein 579