KARPAS-45 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from T-Lymphoblastic Leukemia Tumour (Cell Model Passports, SIDM01007)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01007
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Genes

198 proteins associated with the cell line KARPAS-45 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ADA adenosine deaminase
AHNAK2 AHNAK nucleoprotein 2
AIP aryl hydrocarbon receptor interacting protein
AP3D1 adaptor-related protein complex 3, delta 1 subunit
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12
ASF1A anti-silencing function 1A histone chaperone
ASF1B anti-silencing function 1B histone chaperone
ATF7 activating transcription factor 7
BCOR BCL6 corepressor
BMI1 BMI1 proto-oncogene, polycomb ring finger
BSDC1 BSD domain containing 1
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1
CCNK cyclin K
CD300E CD300e molecule
CDK6 cyclin-dependent kinase 6
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2
CSNK2A2 casein kinase 2, alpha prime polypeptide
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DYNLL1 dynein, light chain, LC8-type 1
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EFR3A EFR3 homolog A (S. cerevisiae)
FKBP5 FK506 binding protein 5
FPGS folylpolyglutamate synthase
GLCCI1 glucocorticoid induced 1
GMEB2 glucocorticoid modulatory element binding protein 2
GOLGA3 golgin A3
GSK3A glycogen synthase kinase 3 alpha
GTSE1 G-2 and S-phase expressed 1
HDAC1 histone deacetylase 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KIF2C kinesin family member 2C
KIFC1 kinesin family member C1
LAMA1 laminin, alpha 1
LCMT1 leucine carboxyl methyltransferase 1
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LOC105369971 vegetative cell wall protein gp1-like
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LZTFL1 leucine zipper transcription factor-like 1
MAEA macrophage erythroblast attacher
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K
MAPT microtubule-associated protein tau
MBP myelin basic protein
MCM5 minichromosome maintenance complex component 5
MED18 mediator complex subunit 18
MORC2 MORC family CW-type zinc finger 2
MVB12A multivesicular body subunit 12A
NCAPD2 non-SMC condensin I complex, subunit D2
NCKAP1L NCK-associated protein 1-like
NCOA7 nuclear receptor coactivator 7
NCOR1 nuclear receptor corepressor 1
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOTCH1 notch 1
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1
OTUD7B OTU deubiquitinase 7B
PAAF1 proteasomal ATPase-associated factor 1
PALD1 phosphatase domain containing, paladin 1
PCDHB4 protocadherin beta 4
PDS5A PDS5 cohesin associated factor A
PRAMEF7 PRAME family member 7
PTP4A1 protein tyrosine phosphatase type IVA, member 1
PTP4A2 protein tyrosine phosphatase type IVA, member 2
PTPRS protein tyrosine phosphatase, receptor type, S
PYGL phosphorylase, glycogen, liver
RAB11FIP1 RAB11 family interacting protein 1 (class I)
RANBP9 RAN binding protein 9
RB1 retinoblastoma 1
RBMX2 RNA binding motif protein, X-linked 2
RNASEH2A ribonuclease H2, subunit A
RNASEH2C ribonuclease H2, subunit C
RNGTT RNA guanylyltransferase and 5'-phosphatase
RUFY1 RUN and FYVE domain containing 1
SIRT6 sirtuin 6
SKA3 spindle and kinetochore associated complex subunit 3
SLFN5 schlafen family member 5
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SRBD1 S1 RNA binding domain 1
SRR serine racemase
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
SYNE3 spectrin repeat containing, nuclear envelope family member 3
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TGM3 transglutaminase 3
TTC22 tetratricopeptide repeat domain 22
TUBAL3 tubulin, alpha-like 3
TYK2 tyrosine kinase 2
UBE2A ubiquitin-conjugating enzyme E2A
UHRF1 ubiquitin-like with PHD and ring finger domains 1
USP11 ubiquitin specific peptidase 11
VRK1 vaccinia related kinase 1
VRK3 vaccinia related kinase 3
WBP4 WW domain binding protein 4
WDR48 WD repeat domain 48
WDR75 WD repeat domain 75
WDR82 WD repeat domain 82
XPO6 exportin 6
YTHDC1 YTH domain containing 1

Symbol Name
ACAD9 acyl-CoA dehydrogenase family, member 9
ACOT8 acyl-CoA thioesterase 8
AHCTF1 AT hook containing transcription factor 1
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
BAG3 BCL2-associated athanogene 3
CDC42 cell division cycle 42
CMSS1 cms1 ribosomal small subunit homolog (yeast)
COMT catechol-O-methyltransferase
COQ7 coenzyme Q7 homolog, ubiquinone (yeast)
COX20 COX20 cytochrome c oxidase assembly factor
COX6A1 cytochrome c oxidase subunit VIa polypeptide 1
CPOX coproporphyrinogen oxidase
CTTN cortactin
DCAF13 DDB1 and CUL4 associated factor 13
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
EMC1 ER membrane protein complex subunit 1
EML2 echinoderm microtubule associated protein like 2
ETFA electron-transfer-flavoprotein, alpha polypeptide
FAHD2A fumarylacetoacetate hydrolase domain containing 2A
FAM102B family with sequence similarity 102, member B
FAM169A family with sequence similarity 169, member A
GFM1 G elongation factor, mitochondrial 1
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GNS glucosamine (N-acetyl)-6-sulfatase
GOLGA5 golgin A5
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HTRA2 HtrA serine peptidase 2
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IQGAP1 IQ motif containing GTPase activating protein 1
ISCA1 iron-sulfur cluster assembly 1
JMJD6 jumonji domain containing 6
KIF21A kinesin family member 21A
LIN7C lin-7 homolog C (C. elegans)
LINC01600 long intergenic non-protein coding RNA 1600
LOC105377329 uncharacterized LOC105377329
LRPPRC leucine-rich pentatricopeptide repeat containing
LTN1 listerin E3 ubiquitin protein ligase 1
MBLAC2 metallo-beta-lactamase domain containing 2
MFN2 mitofusin 2
MPHOSPH6 M-phase phosphoprotein 6
MRPL10 mitochondrial ribosomal protein L10
MRPL12 mitochondrial ribosomal protein L12
MRPL28 mitochondrial ribosomal protein L28
MRPL40 mitochondrial ribosomal protein L40
MRPL46 mitochondrial ribosomal protein L46
MRPS23 mitochondrial ribosomal protein S23
MRPS27 mitochondrial ribosomal protein S27
MRPS35 mitochondrial ribosomal protein S35
MRRF mitochondrial ribosome recycling factor
MTIF2 mitochondrial translational initiation factor 2
NIFK nucleolar protein interacting with the FHA domain of MKI67
NOL7 nucleolar protein 7, 27kDa
NUCB1 nucleobindin 1
NUP107 nucleoporin 107kDa
NUP133 nucleoporin 133kDa
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PDCD11 programmed cell death 11
PDHB pyruvate dehydrogenase (lipoamide) beta
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
PLEC plectin
PLP2 proteolipid protein 2 (colonic epithelium-enriched)
PNPT1 polyribonucleotide nucleotidyltransferase 1
POLR1A polymerase (RNA) I polypeptide A, 194kDa
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
PPIF peptidylprolyl isomerase F
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae)
PRKCA protein kinase C, alpha
PYCR1 pyrroline-5-carboxylate reductase 1
PYCR2 pyrroline-5-carboxylate reductase family, member 2
QSOX2 quiescin Q6 sulfhydryl oxidase 2
RCN1 reticulocalbin 1, EF-hand calcium binding domain
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RHOG ras homolog family member G
RPL7L1 ribosomal protein L7-like 1
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
RSL1D1 ribosomal L1 domain containing 1
SEC61G Sec61 gamma subunit
SH3PXD2B SH3 and PX domains 2B
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
SRPRB signal recognition particle receptor, B subunit
STX3 syntaxin 3
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit
SURF6 surfeit 6
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TDRD5 tudor domain containing 5
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TMEM98 transmembrane protein 98
TOR1AIP2 torsin A interacting protein 2
TPM4 tropomyosin 4
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae)
TRMT5 tRNA methyltransferase 5
UBE2G2 ubiquitin-conjugating enzyme E2G 2
VCL vinculin
ZMYND8 zinc finger, MYND-type containing 8