KARPAS-620 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Plasma Cell Myeloma Tumour (Cell Model Passports, SIDM01006)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01006
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Genes

200 proteins associated with the cell line KARPAS-620 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACY3 aminoacylase 3
AFF2 AF4/FMR2 family, member 2
ALDH16A1 aldehyde dehydrogenase 16 family, member A1
APOE apolipoprotein E
ARHGAP17 Rho GTPase activating protein 17
ARID3A AT rich interactive domain 3A (BRIGHT-like)
ATP13A1 ATPase type 13A1
C11ORF16 chromosome 11 open reading frame 16
CAMKV CaM kinase-like vesicle-associated
CASP1 caspase 1, apoptosis-related cysteine peptidase
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CHID1 chitinase domain containing 1
CHMP2A charged multivesicular body protein 2A
CLIP2 CAP-GLY domain containing linker protein 2
CNPY3 canopy FGF signaling regulator 3
CORO1A coronin, actin binding protein, 1A
CORO7 coronin 7
CSK c-src tyrosine kinase
DCPS decapping enzyme, scavenger
DDX39A DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
ELP2 elongator acetyltransferase complex subunit 2
EML4 echinoderm microtubule associated protein like 4
ERP29 endoplasmic reticulum protein 29
ERP44 endoplasmic reticulum protein 44
FCRLA Fc receptor-like A
FKBP11 FK506 binding protein 11, 19 kDa
FKBP2 FK506 binding protein 2, 13kDa
GM2A GM2 ganglioside activator
GPX7 glutathione peroxidase 7
GSN gelsolin
GUSB glucuronidase, beta
HOMER3 homer scaffolding protein 3
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
ICAM3 intercellular adhesion molecule 3
IGKC immunoglobulin kappa constant
JCHAIN joining chain of multimeric IgA and IgM
KRT14 keratin 14, type I
LIMD1 LIM domains containing 1
MANF mesencephalic astrocyte-derived neurotrophic factor
MAP2K2 mitogen-activated protein kinase kinase 2
METTL7A methyltransferase like 7A
MPG N-methylpurine-DNA glycosylase
MYDGF myeloid-derived growth factor
MYOZ2 myozenin 2
MZB1 marginal zone B and B1 cell-specific protein
N4BP1 NEDD4 binding protein 1
NAF1 nuclear assembly factor 1 ribonucleoprotein
NCDN neurochondrin
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NRF1 nuclear respiratory factor 1
NUBP2 nucleotide binding protein 2
PAAF1 proteasomal ATPase-associated factor 1
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PDIA4 protein disulfide isomerase family A, member 4
PKN2 protein kinase N2
PLCH1 phospholipase C, eta 1
PM20D2 peptidase M20 domain containing 2
PPIB peptidylprolyl isomerase B (cyclophilin B)
PRDX4 peroxiredoxin 4
PRDX5 peroxiredoxin 5
PRKD2 protein kinase D2
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PTPN6 protein tyrosine phosphatase, non-receptor type 6
PYCARD PYD and CARD domain containing
RABEP2 rabaptin, RAB GTPase binding effector protein 2
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RFC2 replication factor C (activator 1) 2, 40kDa
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
SDF2L1 stromal cell-derived factor 2-like 1
SLC38A1 solute carrier family 38, member 1
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SND1 staphylococcal nuclease and tudor domain containing 1
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPCS3 signal peptidase complex subunit 3 homolog (S. cerevisiae)
SPDL1 spindle apparatus coiled-coil protein 1
STK10 serine/threonine kinase 10
SUB1 SUB1 homolog (S. cerevisiae)
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae)
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TAPBPL TAP binding protein-like
TES testin LIM domain protein
TFDP1 transcription factor Dp-1
TPD52 tumor protein D52
TPP2 tripeptidyl peptidase II
TRAPPC5 trafficking protein particle complex 5
TRIM27 tripartite motif containing 27
TRIP12 thyroid hormone receptor interactor 12
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae)
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum)
UBA5 ubiquitin-like modifier activating enzyme 5
USP7 ubiquitin specific peptidase 7 (herpes virus-associated)
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae)
VTN vitronectin
ZFAND6 zinc finger, AN1-type domain 6
ZNF706 zinc finger protein 706

Symbol Name
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACOX1 acyl-CoA oxidase 1, palmitoyl
ACTG1P22 actin gamma 1 pseudogene 22
AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1
AK1 adenylate kinase 1
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ATL3 atlastin GTPase 3
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
BCORL1 BCL6 corepressor-like 1
BRAP BRCA1 associated protein
BRD1 bromodomain containing 1
BRIX1 BRX1, biogenesis of ribosomes
CCNB2 cyclin B2
CCP110 centriolar coiled coil protein 110kDa
CD151 CD151 molecule (Raph blood group)
CFL2 cofilin 2 (muscle)
CLK3 CDC-like kinase 3
CRABP2 cellular retinoic acid binding protein 2
CSNK1D casein kinase 1, delta
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DPP9 dipeptidyl-peptidase 9
DSTN destrin (actin depolymerizing factor)
EXOC5 exocyst complex component 5
FCHO2 FCH domain only 2
FN3KRP fructosamine 3 kinase related protein
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli)
FYTTD1 forty-two-three domain containing 1
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2
GCC2 GRIP and coiled-coil domain containing 2
GIPC1 GIPC PDZ domain containing family, member 1
GOLGA2 golgin A2
HAUS1 HAUS augmin-like complex, subunit 1
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
JUNB jun B proto-oncogene
KPNA4 karyopherin alpha 4 (importin alpha 3)
LIMA1 LIM domain and actin binding 1
LOC105371061 uncharacterized LOC105371061
LPCAT2 lysophosphatidylcholine acyltransferase 2
MAP7D1 MAP7 domain containing 1
MCU mitochondrial calcium uniporter
METTL5 methyltransferase like 5
MFN1 mitofusin 1
MFN2 mitofusin 2
MICU1 mitochondrial calcium uptake 1
MIR513A1 microRNA 513a-1
MRPL15 mitochondrial ribosomal protein L15
MRPL33 mitochondrial ribosomal protein L33
MRPL52 mitochondrial ribosomal protein L52
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit
NCBP2 nuclear cap binding protein subunit 2, 20kDa
NDC1 NDC1 transmembrane nucleoporin
NDRG3 NDRG family member 3
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NHLRC2 NHL repeat containing 2
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NKPD1 NTPase, KAP family P-loop domain containing 1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NYX nyctalopin
ORC1 origin recognition complex, subunit 1
OXLD1 oxidoreductase-like domain containing 1
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PLRG1 pleiotropic regulator 1
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PPT1 palmitoyl-protein thioesterase 1
PRMT3 protein arginine methyltransferase 3
RAP1A RAP1A, member of RAS oncogene family
RBM34 RNA binding motif protein 34
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae)
RIOK1 RIO kinase 1
RTN4 reticulon 4
SAMM50 SAMM50 sorting and assembly machinery component
SCRN1 secernin 1
SH3BP4 SH3-domain binding protein 4
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLC39A10 solute carrier family 39 (zinc transporter), member 10
SPAG7 sperm associated antigen 7
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
STRIP1 striatin interacting protein 1
STX12 syntaxin 12
TBK1 TANK-binding kinase 1
TM9SF1 transmembrane 9 superfamily member 1
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae)
WDR18 WD repeat domain 18
WDR3 WD repeat domain 3
WDR89 WD repeat domain 89
XYLT2 xylosyltransferase II
YES1 YES proto-oncogene 1, Src family tyrosine kinase
YPEL5 yippee-like 5 (Drosophila)
ZFYVE19 zinc finger, FYVE domain containing 19
ZNF296 zinc finger protein 296
ZNF346 zinc finger protein 346
ZYX zyxin