KDM5B Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description lysine (K)-specific demethylase 5B| (NCBI Entrez Gene Database, 10765)
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Genes

325 genes differentially expressed following the KDM5B gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
KIAA0825 KIAA0825 2.46927
GPR33 G protein-coupled receptor 33 (gene/pseudogene) 2.46927
RGS8 regulator of G-protein signaling 8 2.46927
FFAR1 free fatty acid receptor 1 2.46927
LRRC55 leucine rich repeat containing 55 2.46927
OR13A1 olfactory receptor, family 13, subfamily A, member 1 2.46927
EPO erythropoietin 2.46927
FOXA2 forkhead box A2 2.46927
SMYD1 SET and MYND domain containing 1 2.46927
ATG9B autophagy related 9B 2.46927
HTR3C 5-hydroxytryptamine (serotonin) receptor 3C, ionotropic 2.46927
AMDHD1 amidohydrolase domain containing 1 2.46927
RUMY3 RUMY family member 3 2.46927
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 2.46927
CLDN14 claudin 14 2.46927
C1ORF146 chromosome 1 open reading frame 146 2.46927
NAPSA napsin A aspartic peptidase 2.46927
CBLIF cobalamin binding intrinsic factor 2.46927
TMC2 transmembrane channel-like 2 2.46927
CCN5 cellular communication network factor 5 2.46927
MEIS1 Meis homeobox 1 2.46927
ALAS2 5'-aminolevulinate synthase 2 2.46927
TAL2 T-cell acute lymphocytic leukemia 2 2.46927
STAP1 signal transducing adaptor family member 1 2.46927
PTTG2 pituitary tumor-transforming 2 2.46927
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 2.40401
SLC35G5 solute carrier family 35, member G5 2.40401
NDRG1 N-myc downstream regulated 1 2.40401
RAX retina and anterior neural fold homeobox 2.40401
NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa 2.40401
TMEM14C transmembrane protein 14C 2.40401
TMPRSS11B transmembrane protease, serine 11B 2.40401
PLIN1 perilipin 1 2.40401
AGMAT agmatine ureohydrolase (agmatinase) 2.40401
HLF hepatic leukemia factor 2.40401
VTN vitronectin 2.40401
FGF21 fibroblast growth factor 21 2.40401
SPINK4 serine peptidase inhibitor, Kazal type 4 2.40401
ZNF467 zinc finger protein 467 2.40401
SSTR5 somatostatin receptor 5 2.40401
SHCBP1L SHC SH2-domain binding protein 1-like 2.40401
ADAD2 adenosine deaminase domain containing 2 2.40401
CA1 carbonic anhydrase I 2.40401
RPL34 ribosomal protein L34 2.40401
MS4A15 membrane-spanning 4-domains, subfamily A, member 15 2.40401
CRX cone-rod homeobox 2.40401
MAGED4 melanoma antigen family D4 2.40401
UCP1 uncoupling protein 1 (mitochondrial, proton carrier) 2.40401
GJB3 gap junction protein, beta 3, 31kDa 2.40401
WT1 Wilms tumor 1 2.40401
GPR151 G protein-coupled receptor 151 2.40401
SSTR1 somatostatin receptor 1 2.40401
GLYAT glycine-N-acyltransferase 2.40401
TBX15 T-box 15 2.40401
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 2.40401
RASSF10 Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 2.40401
CYP4A11 cytochrome P450, family 4, subfamily A, polypeptide 11 2.40401
CCL5 chemokine (C-C motif) ligand 5 2.40401
CX3CR1 chemokine (C-X3-C motif) receptor 1 2.40401
SPDYE8 speedy/RINGO cell cycle regulator family member E8 2.40401
GPR35 G protein-coupled receptor 35 2.40401
SPIC Spi-C transcription factor (Spi-1/PU.1 related) 2.40401
FRG2C FSHD region gene 2 family, member C 2.40401
MYZAP myocardial zonula adherens protein 2.40401
RPL24 ribosomal protein L24 2.40401
PROZ protein Z, vitamin K-dependent plasma glycoprotein 2.40401
PIRT phosphoinositide-interacting regulator of transient receptor potential channels 2.40401
MYPN myopalladin 2.40401
DYNLRB2 dynein, light chain, roadblock-type 2 2.40401
C15ORF62 chromosome 15 open reading frame 62 2.40401
PCDHGA9 protocadherin gamma subfamily A, 9 2.40401
APH1B APH1B gamma secretase subunit 2.40401
LINC02268 long intergenic non-protein coding RNA 2268 2.40401
LOC122526780 uncharacterized LOC122526780 2.40401
NFILZ NFIL3 like basic leucine zipper 2.40401
CFAP157 cilia and flagella associated protein 157 2.40401
RNF227 ring finger protein 227 2.40401
CIROP ciliated left-right organizer metallopeptidase 2.40401
KASH5 KASH domain containing 5 2.40401
GGTA1 glycoprotein alpha-galactosyltransferase 1 (inactive) 2.40401
PABIR2 PABIR family member 2 2.40401
GIPC3 GIPC PDZ domain containing family, member 3 2.40401
POU2F3 POU class 2 homeobox 3 2.40401
CNTN6 contactin 6 2.40401
PNMA6F PNMA family member 6F 2.40401
SCRT2 scratch family zinc finger 2 2.40401
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 2.40401
CLDN9 claudin 9 2.40401
MTNR1B melatonin receptor 1B 2.40401
RAB44 RAB44, member RAS oncogene family 2.40401
OR2A1 olfactory receptor, family 2, subfamily A, member 1 2.40401
FPR1 formyl peptide receptor 1 2.40401
USH1G Usher syndrome 1G (autosomal recessive) 2.40401
TAS2R5 taste receptor, type 2, member 5 2.40401
SLAMF1 signaling lymphocytic activation molecule family member 1 2.40401
ZAN zonadhesin (gene/pseudogene) 2.40401
PRG4 proteoglycan 4 2.40401
GPR84 G protein-coupled receptor 84 2.40401
FGFBP2 fibroblast growth factor binding protein 2 2.40401
PTH parathyroid hormone 2.40401
VCX3B variable charge, X-linked 3B 2.40401
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 2.40401
CCR8 chemokine (C-C motif) receptor 8 2.40401
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3 2.40401
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 2.40401
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 2.40401
RNF151 ring finger protein 151 2.40401
AVP arginine vasopressin 2.40401
TPPP2 tubulin polymerization-promoting protein family member 2 2.40401
RSPH10B2 radial spoke head 10 homolog B2 (Chlamydomonas) 2.40401
THTPA thiamine triphosphatase 2.40401
MYADML2 myeloid-associated differentiation marker-like 2 2.40401
AQP8 aquaporin 8 2.40401
RBBP8NL RBBP8 N-terminal like 2.40401
ORM2 orosomucoid 2 2.40401
CLRN1 clarin 1 2.40401
S100Z S100 calcium binding protein Z 2.40401
NSL1 NSL1, MIS12 kinetochore complex component 2.40401
CNTF ciliary neurotrophic factor 2.40401
IL12B interleukin 12B 2.40401
HSPB2 heat shock 27kDa protein 2 2.40401
RORC RAR-related orphan receptor C 2.40401
ERVV-2 endogenous retrovirus group V, member 2 2.40401
DES desmin 2.40401
CCDC154 coiled-coil domain containing 154 2.40401
TSPAN16 tetraspanin 16 2.40401
GAGE10 G antigen 10 2.40401
KAZALD1 Kazal-type serine peptidase inhibitor domain 1 2.40401
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 2.40401
TIPE2 TNF alpha induced protein 8 like 2 2.40401
CA5A carbonic anhydrase VA, mitochondrial 2.40401
PRSS33 protease, serine, 33 2.40401
SAMD7 sterile alpha motif domain containing 7 2.40401
HK3 hexokinase 3 (white cell) 2.40401
PRR35 proline rich 35 2.40401
MORN5 MORN repeat containing 5 2.40401
GLRB glycine receptor, beta 2.40401
MUC17 mucin 17, cell surface associated 2.40401
RPS27 ribosomal protein S27 2.40401
LRRC25 leucine rich repeat containing 25 2.40401
SLC22A24 solute carrier family 22, member 24 2.40401
TREH trehalase (brush-border membrane glycoprotein) 2.40401
CDH13 cadherin 13 2.40401
CBX6 chromobox homolog 6 2.40401
HUS1B HUS1 checkpoint homolog b (S. pombe) 2.40401
C22ORF42 chromosome 22 open reading frame 42 2.40401
TRIM7 tripartite motif containing 7 2.40401
ARL16 ADP-ribosylation factor-like 16 2.40401
TBC1D26 TBC1 domain family, member 26 2.40401
CLCNKB chloride channel, voltage-sensitive Kb 2.40401
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 2.40401
PITX2 paired-like homeodomain 2 2.40401
FXYD3 FXYD domain containing ion transport regulator 3 2.40401
DHRS9 dehydrogenase/reductase (SDR family) member 9 2.40401
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 2.40401
PCDHGA4 protocadherin gamma subfamily A, 4 2.40401
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) 2.40401
FGF7 fibroblast growth factor 7 2.40401
FGF3 fibroblast growth factor 3 2.40401
NWD1 NACHT and WD repeat domain containing 1 2.40401
ITGA8 integrin, alpha 8 2.40401
EVPL envoplakin 2.40401
NMUR2 neuromedin U receptor 2 2.40401
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) 2.40401
SPX spexin hormone 2.40401
MYO1G myosin IG 2.40401
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 2.40401
IRX1 iroquois homeobox 1 2.40401
SLC36A3 solute carrier family 36, member 3 2.40401
TAS2R41 taste receptor, type 2, member 41 2.40401
IL27 interleukin 27 2.40401
ARHGAP40 Rho GTPase activating protein 40 2.40401
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta 2.40401
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 2.40401
CIB4 calcium and integrin binding family member 4 2.40401
RMI2 RecQ mediated genome instability 2 2.40401
GOLGA8T golgin A8 family, member T 2.40401
CFB complement factor B 2.40401
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2 2.40401
PAGE2B P antigen family, member 2B 2.40401
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 2.40401
PF4V1 platelet factor 4 variant 1 2.40401
SMIM15 small integral membrane protein 15 2.40148
ADAMTSL4 ADAMTS-like 4 2.36686
ZFP62 ZFP62 zinc finger protein 2.36686
ARG1 arginase 1 2.36686
LDHC lactate dehydrogenase C 2.36686
TRPC1 transient receptor potential cation channel, subfamily C, member 1 2.36686
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1 2.36686
TMEM191C transmembrane protein 191C 2.36686
ASB16 ankyrin repeat and SOCS box containing 16 2.36686
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 2.36686
MBD1 methyl-CpG binding domain protein 1 2.34729
ELOC elongin C 2.33062
CARM1 coactivator-associated arginine methyltransferase 1 2.32871
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3 2.31365
RBIS ribosomal biogenesis factor 2.31031
S100A10 S100 calcium binding protein A10 2.30641
FSTL5 follistatin-like 5 2.29767
ODR4 odr-4 GPCR localization factor homolog 2.29767
SPTSSB serine palmitoyltransferase, small subunit B 2.29717
RPS24 ribosomal protein S24 2.28131
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 2.27646
ZBTB11 zinc finger and BTB domain containing 11 2.27558
ZBTB45 zinc finger and BTB domain containing 45 2.27558
NR1D2 nuclear receptor subfamily 1, group D, member 2 2.27249
PAQR4 progestin and adipoQ receptor family member IV 2.26891
CMKLR2 chemerin chemokine-like receptor 2 2.24738
SBK1 SH3 domain binding kinase 1 2.24738
CYBA cytochrome b-245, alpha polypeptide 2.24738
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 2.22948
MRPS33 mitochondrial ribosomal protein S33 2.22881
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 2.20748
RPL23 ribosomal protein L23 2.16754
CAPN2 calpain 2, (m/II) large subunit 2.16754
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 2.16698
UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 2.14202
STMN1 stathmin 1 2.14079
RPS12 ribosomal protein S12 2.1371
PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 2.11202
FBXO42 F-box protein 42 2.09679
BST2 bone marrow stromal cell antigen 2 2.08332
PRDX1 peroxiredoxin 1 2.06041
EGFL7 EGF-like-domain, multiple 7 2.05212
OLFM1 olfactomedin 1 2.05212
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 2.03288
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein) 2.03054
TMSB10 thymosin beta 10 2.01889
GNG12 guanine nucleotide binding protein (G protein), gamma 12 2.01032

decreased expression

Symbol Name Standardized Value
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 -2.46927
MGLL monoglyceride lipase -2.46927
MNT MAX network transcriptional repressor -2.40401
SLC7A14 solute carrier family 7, member 14 -2.40401
RPL27A ribosomal protein L27a -2.40401
KAT2B K(lysine) acetyltransferase 2B -2.40401
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 -2.40401
UCMA upper zone of growth plate and cartilage matrix associated -2.40401
ATXN7L2 ataxin 7-like 2 -2.40401
CNIH3 cornichon family AMPA receptor auxiliary protein 3 -2.40401
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 -2.40401
RABEP2 rabaptin, RAB GTPase binding effector protein 2 -2.40401
ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 -2.40401
PCDHA6 protocadherin alpha 6 -2.40401
ACOT1 acyl-CoA thioesterase 1 -2.40401
MXRA8 matrix-remodelling associated 8 -2.40401
G6PC3 glucose 6 phosphatase, catalytic, 3 -2.40401
GLYCTK glycerate kinase -2.40401
CD36 CD36 molecule (thrombospondin receptor) -2.40401
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1 -2.40401
VSIG1 V-set and immunoglobulin domain containing 1 -2.40401
ACVR1C activin A receptor, type IC -2.40401
LIPG lipase, endothelial -2.40148
SPTLC3 serine palmitoyltransferase, long chain base subunit 3 -2.39871
MTMR9 myotubularin related protein 9 -2.39772
PTGFR prostaglandin F receptor (FP) -2.36686
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 -2.36686
TBX22 T-box 22 -2.36686
FRK fyn-related Src family tyrosine kinase -2.36686
STAR steroidogenic acute regulatory protein -2.36686
NLRP10 NLR family, pyrin domain containing 10 -2.36686
DPEP1 dipeptidase 1 (renal) -2.36686
TGFB3 transforming growth factor, beta 3 -2.36686
DEPTOR DEP domain containing MTOR-interacting protein -2.36686
VWA3A von Willebrand factor A domain containing 3A -2.36686
RBM44 RNA binding motif protein 44 -2.36686
C6ORF58 chromosome 6 open reading frame 58 -2.36686
NXPH3 neurexophilin 3 -2.36686
RSPH6A radial spoke head 6 homolog A (Chlamydomonas) -2.36686
HES4 hes family bHLH transcription factor 4 -2.36686
MMP28 matrix metallopeptidase 28 -2.36686
BFSP2 beaded filament structural protein 2, phakinin -2.36686
PRH2 proline-rich protein HaeIII subfamily 2 -2.36686
TBC1D28 TBC1 domain family, member 28 -2.36686
ZMYND15 zinc finger, MYND-type containing 15 -2.36686
C1ORF232 chromosome 1 open reading frame 230 -2.36686
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 -2.36686
GARIN1A golgi associated RAB2 interactor 1A -2.36686
SAMD5 sterile alpha motif domain containing 5 -2.36686
CALR3 calreticulin 3 -2.36686
FCRLB Fc receptor-like B -2.36686
VAV1 vav 1 guanine nucleotide exchange factor -2.36686
USP32 ubiquitin specific peptidase 32 -2.36686
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1 -2.36686
LCP1 lymphocyte cytosolic protein 1 (L-plastin) -2.36686
ACOT12 acyl-CoA thioesterase 12 -2.36686
ITIH6 inter-alpha-trypsin inhibitor heavy chain family, member 6 -2.36686
FRMPD2 FERM and PDZ domain containing 2 -2.36686
R3HCC1 R3H domain and coiled-coil containing 1 -2.36686
KIF12 kinesin family member 12 -2.36686
BST1 bone marrow stromal cell antigen 1 -2.36686
ACSL6 acyl-CoA synthetase long-chain family member 6 -2.36686
TMPRSS5 transmembrane protease, serine 5 -2.36686
TFDP1 transcription factor Dp-1 -2.36686
TMEM86A transmembrane protein 86A -2.36686
PRRG1 proline rich Gla (G-carboxyglutamic acid) 1 -2.36177
FAM53B family with sequence similarity 53, member B -2.34756
CHSY3 chondroitin sulfate synthase 3 -2.3371
MNMIP1 manchette microtubule inner protein 1 -2.3371
GPATCH2 G patch domain containing 2 -2.30641
PDCL2 phosducin-like 2 -2.28131
CHRM2 cholinergic receptor, muscarinic 2 -2.27212
MTMR8 myotubularin related protein 8 -2.27212
CARMIL3 capping protein regulator and myosin 1 linker 3 -2.27212
IPO13 importin 13 -2.26154
SCAMP2 secretory carrier membrane protein 2 -2.2613
NAP1L4 nucleosome assembly protein 1-like 4 -2.2512
OGA O-GlcNAcase -2.24738
CNN2 calponin 2 -2.24738
ZNF420 zinc finger protein 420 -2.24302
ZNF641 zinc finger protein 641 -2.2286
LRGUK leucine-rich repeats and guanylate kinase domain containing -2.21604
SETD1A SET domain containing 1A -2.2101
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -2.19626
LRRC75A leucine rich repeat containing 75A -2.19558
MPDZ multiple PDZ domain protein -2.18206
PUS7 pseudouridylate synthase 7 (putative) -2.16929
ATAD3B ATPase family, AAA domain containing 3B -2.16909
ONECUT2 one cut homeobox 2 -2.12789
MCRS1 microspherule protein 1 -2.10123
ZMAT2 zinc finger, matrin-type 2 -2.08332
KIAA0408 KIAA0408 -2.08211
EXO1 exonuclease 1 -2.06041
SP3 Sp3 transcription factor -2.04547
FGGY FGGY carbohydrate kinase domain containing -2.03948
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 -2.03477