KYSE-50 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from -666 (Catalogue of Somatic Mutations In Cancer)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00550
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Genes

198 proteins associated with the cell line KYSE-50 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABI1 abl-interactor 1
ACIN1 apoptotic chromatin condensation inducer 1
ACYP2 acylphosphatase 2, muscle type
AHDC1 AT hook, DNA binding motif, containing 1
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
ARGLU1 arginine and glutamate rich 1
ARID5B AT rich interactive domain 5B (MRF1-like)
ARIH2 ariadne RBR E3 ubiquitin protein ligase 2
ATP11C ATPase, class VI, type 11C
BCAS2 breast carcinoma amplified sequence 2
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BICD2 bicaudal D homolog 2 (Drosophila)
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
C17ORF49 chromosome 17 open reading frame 49
CALCOCO2 calcium binding and coiled-coil domain 2
CAMKV CaM kinase-like vesicle-associated
CAPNS2 calpain, small subunit 2
CCDC43 coiled-coil domain containing 43
CCS copper chaperone for superoxide dismutase
CD2BP2 CD2 (cytoplasmic tail) binding protein 2
CD9 CD9 molecule
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1
CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6
CHRAC1 chromatin accessibility complex 1
CNBP CCHC-type zinc finger, nucleic acid binding protein
COX5B cytochrome c oxidase subunit Vb
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DIAPH1 diaphanous-related formin 1
DPY30 dpy-30 homolog (C. elegans)
EBAG9 estrogen receptor binding site associated, antigen, 9
ENY2 enhancer of yellow 2 homolog (Drosophila)
ERGIC3 ERGIC and golgi 3
FILIP1L filamin A interacting protein 1-like
FRA10AC1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
GJA1 gap junction protein, alpha 1, 43kDa
GM2A GM2 ganglioside activator
GMEB2 glucocorticoid modulatory element binding protein 2
GPATCH8 G patch domain containing 8
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HTT huntingtin
INIP INTS3 and NABP interacting protein
INTS7 integrator complex subunit 7
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
ITGB5 integrin, beta 5
KPNA4 karyopherin alpha 4 (importin alpha 3)
KRT15 keratin 15, type I
KTN1 kinectin 1 (kinesin receptor)
LIPH lipase, member H
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1
MAPK14 mitogen-activated protein kinase 14
MED30 mediator complex subunit 30
MGME1 mitochondrial genome maintenance exonuclease 1
MRPL54 mitochondrial ribosomal protein L54
MRPS31 mitochondrial ribosomal protein S31
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
NDE1 nudE neurodevelopment protein 1
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NFU1 NFU1 iron-sulfur cluster scaffold
NHSL1 NHS-like 1
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor)
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1)
PRR14 proline rich 14
RABEP2 rabaptin, RAB GTPase binding effector protein 2
RAD21 RAD21 homolog (S. pombe)
RAD23B RAD23 homolog B (S. cerevisiae)
RBM17 RNA binding motif protein 17
RBM27 RNA binding motif protein 27
RBM8A RNA binding motif protein 8A
RFC4 replication factor C (activator 1) 4, 37kDa
RNF168 ring finger protein 168, E3 ubiquitin protein ligase
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RSF1 remodeling and spacing factor 1
S100A2 S100 calcium binding protein A2
SF3A1 splicing factor 3a, subunit 1, 120kDa
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SPRR1B small proline-rich protein 1B
SQSTM1 sequestosome 1
STIP1 stress-induced phosphoprotein 1
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
TATDN1 TatD DNase domain containing 1
THUMPD1 THUMP domain containing 1
TPR translocated promoter region, nuclear basket protein
TXN thioredoxin
UBXN7 UBX domain protein 7
USP5 ubiquitin specific peptidase 5 (isopeptidase T)
WDR55 WD repeat domain 55
WDR92 WD repeat domain 92
WNK1 WNK lysine deficient protein kinase 1
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZC3H11A zinc finger CCCH-type containing 11A
ZFAND6 zinc finger, AN1-type domain 6
ZNF384 zinc finger protein 384
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase

Symbol Name
ACOT13 acyl-CoA thioesterase 13
ACSL3 acyl-CoA synthetase long-chain family member 3
AGO1 argonaute RISC catalytic component 1
AK3 adenylate kinase 3
AKAP17A A kinase (PRKA) anchor protein 17A
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
ANKZF1 ankyrin repeat and zinc finger domain containing 1
AP2A2 adaptor-related protein complex 2, alpha 2 subunit
APOO apolipoprotein O
ARF5 ADP-ribosylation factor 5
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
BICC1 BicC family RNA binding protein 1
CAB39 calcium binding protein 39
CCDC93 coiled-coil domain containing 93
CEP97 centrosomal protein 97kDa
CHMP4C charged multivesicular body protein 4C
CHST14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
CPNE2 copine II
DENND4C DENN/MADD domain containing 4C
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
ELOF1 elongation factor 1 homolog (S. cerevisiae)
FAR1 fatty acyl CoA reductase 1
GDI1 GDP dissociation inhibitor 1
GGACT gamma-glutamylamine cyclotransferase
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
GPATCH3 G patch domain containing 3
GRAMD1C GRAM domain containing 1C
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
HCCS holocytochrome c synthase
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
HOOK3 hook microtubule-tethering protein 3
KIF15 kinesin family member 15
KRT9 keratin 9, type I
LNPEP leucyl/cystinyl aminopeptidase
MAPT microtubule-associated protein tau
MINPP1 multiple inositol-polyphosphate phosphatase 1
MSN moesin
MTCH1 mitochondrial carrier 1
MTCH2 mitochondrial carrier 2
MTND2P3 MT-ND2 pseudogene 3
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NAE1 NEDD8 activating enzyme E1 subunit 1
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCAPH2 non-SMC condensin II complex, subunit H2
NCKIPSD NCK interacting protein with SH3 domain
NELFB negative elongation factor complex member B
NLRP1 NLR family, pyrin domain containing 1
NOC4L nucleolar complex associated 4 homolog (S. cerevisiae)
NOL4L nucleolar protein 4-like
NUP160 nucleoporin 160kDa
NUP37 nucleoporin 37kDa
PDE12 phosphodiesterase 12
PDE4DIP phosphodiesterase 4D interacting protein
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PGAM5 phosphoglycerate mutase family member 5
POLR1E polymerase (RNA) I polypeptide E, 53kDa
POLR3C polymerase (RNA) III (DNA directed) polypeptide C (62kD)
POP7 processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRPF8 pre-mRNA processing factor 8
PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2
RAB2A RAB2A, member RAS oncogene family
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RBBP9 retinoblastoma binding protein 9
RBM15B RNA binding motif protein 15B
RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae)
RPF2 ribosome production factor 2 homolog (S. cerevisiae)
RPL13A ribosomal protein L13a
RPP25 ribonuclease P/MRP 25kDa subunit
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
SACM1L SAC1 suppressor of actin mutations 1-like (yeast)
SCCPDH saccharopine dehydrogenase (putative)
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3
SIRT3 sirtuin 3
SKA2 spindle and kinetochore associated complex subunit 2
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
SMIM20 small integral membrane protein 20
SPATA20 spermatogenesis associated 20
SPATA5 spermatogenesis associated 5
SPATS2L spermatogenesis associated, serine-rich 2-like
SPRYD4 SPRY domain containing 4
STK39 serine threonine kinase 39
STK4 serine/threonine kinase 4
STX18 syntaxin 18
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family)
TEX10 testis expressed 10
TMEM192 transmembrane protein 192
TMEM201 transmembrane protein 201
TOP1 topoisomerase (DNA) I
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
ZC3HAV1L zinc finger CCCH-type, antiviral 1-like
ZDHHC20 zinc finger, DHHC-type containing 20