LB-100_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description LB-100 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the LB-100_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.14634
CDH13 cadherin 13 0.0820131
MAP1B microtubule-associated protein 1B 0.0540997
PLAT plasminogen activator, tissue 0.0534955
LDHA lactate dehydrogenase A 0.0514561
ANKRD11 ankyrin repeat domain 11 0.0429875
HDAC9 histone deacetylase 9 0.0392204
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0365998
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0359308
ASPH aspartate beta-hydroxylase 0.0343605
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0332272
EGFR epidermal growth factor receptor 0.0321863
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.030225
SP100 SP100 nuclear antigen 0.0293598
CENPF centromere protein F, 350/400kDa 0.0282968
EFNA5 ephrin-A5 0.0272708
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.026817
PODXL podocalyxin-like 0.0256584
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0255684
ALCAM activated leukocyte cell adhesion molecule 0.0255476
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0251657
PBX3 pre-B-cell leukemia homeobox 3 0.0244528
MACF1 microtubule-actin crosslinking factor 1 0.0244275
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0240249
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0232661
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0231063
MSN moesin 0.0227698
DOCK5 dedicator of cytokinesis 5 0.0224552
GOLGB1 golgin B1 0.0222398
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.020982
DST dystonin 0.0206549
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0204336
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.020093
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0198187
SAMD9 sterile alpha motif domain containing 9 0.0197898
PLXNA2 plexin A2 0.0193974
PFN1 profilin 1 0.0189867
AHNAK2 AHNAK nucleoprotein 2 0.0189298
MYADM myeloid-associated differentiation marker 0.0189096
SLC39A11 solute carrier family 39, member 11 0.0187887
EXT1 exostosin glycosyltransferase 1 0.0185179
DGKG diacylglycerol kinase, gamma 90kDa 0.0184756
CYTH3 cytohesin 3 0.0181565
INTS6 integrator complex subunit 6 0.018017
DSG2 desmoglein 2 0.0177575
NEK7 NIMA-related kinase 7 0.0177149
ANXA1 annexin A1 0.0175635
FSTL1 follistatin-like 1 0.0161962
DSPP dentin sialophosphoprotein 0.0158843
ERBIN erbb2 interacting protein 0.0158283
MKI67 marker of proliferation Ki-67 0.0157928
KIAA1549L KIAA1549-like 0.0157378
MPRIP myosin phosphatase Rho interacting protein 0.0157377
BZW1 basic leucine zipper and W2 domains 1 0.0153667
RASAL2 RAS protein activator like 2 0.0148787
VCL vinculin 0.014758
ADAM32 ADAM metallopeptidase domain 32 0.0146941
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0146713
ZSWIM6 zinc finger, SWIM-type containing 6 0.0146127
FOSL1 FOS-like antigen 1 0.0143079
FMN2 formin 2 0.0142671
CSTB cystatin B (stefin B) 0.0141424
PDLIM5 PDZ and LIM domain 5 0.0140942
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0136777
SET SET nuclear proto-oncogene 0.0134908
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0134627
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0133848
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0132658
L1CAM L1 cell adhesion molecule 0.0132123
PMP22 peripheral myelin protein 22 0.012863
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0127195
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0126015
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0125975
S100A10 S100 calcium binding protein A10 0.0124558
NAV3 neuron navigator 3 0.0123311
SON SON DNA binding protein 0.0122886
FN1 fibronectin 1 0.0122519
TPM3 tropomyosin 3 0.0121469
SPDL1 spindle apparatus coiled-coil protein 1 0.0120313
SAMD4A sterile alpha motif domain containing 4A 0.0120249
TMED2 transmembrane emp24 domain trafficking protein 2 0.0116354
THSD4 thrombospondin, type I, domain containing 4 0.0116118
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0115178
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0115009
MBNL1 muscleblind-like splicing regulator 1 0.0114026
S100A11 S100 calcium binding protein A11 0.011187
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0111807
DSTN destrin (actin depolymerizing factor) 0.0109825
VEGFC vascular endothelial growth factor C 0.0109152
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0107215
IGFBP3 insulin-like growth factor binding protein 3 0.0106845
ANTXR2 anthrax toxin receptor 2 0.0106743
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.010672
CDK6 cyclin-dependent kinase 6 0.0106548
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.010608
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0105194
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0104746
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0104004
KLF10 Kruppel-like factor 10 0.0103089
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0102505

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.125734
FBN1 fibrillin 1 -0.106043
UBC ubiquitin C -0.0923597
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0784069
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0768216
DLG1 discs, large homolog 1 (Drosophila) -0.0764296
TMSB10 thymosin beta 10 -0.0668604
LOXL2 lysyl oxidase-like 2 -0.0650461
COL1A2 collagen, type I, alpha 2 -0.0567725
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.054569
LOX lysyl oxidase -0.0505667
SOD2 superoxide dismutase 2, mitochondrial -0.0503184
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0419385
SBF2 SET binding factor 2 -0.0415351
FNDC3B fibronectin type III domain containing 3B -0.0400173
NDRG1 N-myc downstream regulated 1 -0.039741
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0396957
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0371168
GPC6 glypican 6 -0.0352268
TRIO trio Rho guanine nucleotide exchange factor -0.0347001
DPYSL3 dihydropyrimidinase-like 3 -0.0346866
COL5A2 collagen, type V, alpha 2 -0.0339592
AHNAK AHNAK nucleoprotein -0.0334703
COL3A1 collagen, type III, alpha 1 -0.033157
OGA O-GlcNAcase -0.0325969
LOC112694756 uncharaterized LOC112694756 -0.0312222
NAV2 neuron navigator 2 -0.0305905
RUNX1 runt-related transcription factor 1 -0.0304116
SPAG9 sperm associated antigen 9 -0.0290816
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0281671
AUTS2 autism susceptibility candidate 2 -0.0277223
STC1 stanniocalcin 1 -0.0275866
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.027455
KDM3A lysine (K)-specific demethylase 3A -0.0271945
XPO1 exportin 1 -0.0270251
ATP13A3 ATPase type 13A3 -0.0255428
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0254104
ELL2 elongation factor, RNA polymerase II, 2 -0.0250632
THBS2 thrombospondin 2 -0.0250182
ANKRD10 ankyrin repeat domain 10 -0.0250109
APP amyloid beta (A4) precursor protein -0.0239325
TNIP1 TNFAIP3 interacting protein 1 -0.0232819
PTMA prothymosin, alpha -0.0231245
MYOF myoferlin -0.0228363
SLC38A1 solute carrier family 38, member 1 -0.0226825
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0225505
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0224974
RTN4 reticulon 4 -0.0223489
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0223049
RHOBTB3 Rho-related BTB domain containing 3 -0.0219907
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0217083
WSB1 WD repeat and SOCS box containing 1 -0.0216844
HLA-E major histocompatibility complex, class I, E -0.0216629
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0216344
ZNF292 zinc finger protein 292 -0.0216024
CD109 CD109 molecule -0.0214269
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0210863
WTAP Wilms tumor 1 associated protein -0.0210783
ESYT2 extended synaptotagmin-like protein 2 -0.0207733
MEIS2 Meis homeobox 2 -0.0207428
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0204472
DENND5A DENN/MADD domain containing 5A -0.0203134
PKM pyruvate kinase, muscle -0.0202221
ARL4C ADP-ribosylation factor-like 4C -0.0198306
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0197775
WDFY1 WD repeat and FYVE domain containing 1 -0.0194327
USP34 ubiquitin specific peptidase 34 -0.019279
IGF2R insulin-like growth factor 2 receptor -0.0192749
ZNF207 zinc finger protein 207 -0.0192712
ACBD3 acyl-CoA binding domain containing 3 -0.0190728
CD99 CD99 molecule -0.0190479
ABI3BP ABI family, member 3 (NESH) binding protein -0.0190108
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0189999
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.018929
COL8A1 collagen, type VIII, alpha 1 -0.0188754
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0188134
NAMPT nicotinamide phosphoribosyltransferase -0.0187926
MARCHF6 membrane associated ring-CH-type finger 6 -0.0186547
NT5C2 5'-nucleotidase, cytosolic II -0.0185723
ACTN4 actinin, alpha 4 -0.0182352
CANX calnexin -0.0181519
TMOD1 tropomodulin 1 -0.0180184
S100A6 S100 calcium binding protein A6 -0.0179687
ARL15 ADP-ribosylation factor-like 15 -0.0179437
NPEPPS aminopeptidase puromycin sensitive -0.0178936
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0178241
FLNB filamin B, beta -0.0177507
SH3PXD2B SH3 and PX domains 2B -0.017744
APAF1 apoptotic peptidase activating factor 1 -0.0176421
SP3 Sp3 transcription factor -0.0175511
PSD3 pleckstrin and Sec7 domain containing 3 -0.0173912
RNF24 ring finger protein 24 -0.0173708
YEATS2 YEATS domain containing 2 -0.017309
NAP1L1 nucleosome assembly protein 1-like 1 -0.0172633
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0168888
COL6A1 collagen, type VI, alpha 1 -0.0168033
HLA-B major histocompatibility complex, class I, B -0.0167935
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0167242
SLC22A23 solute carrier family 22, member 23 -0.0167024
ADAM17 ADAM metallopeptidase domain 17 -0.0166989