LB-100_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description LB-100 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the LB-100_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.140925
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.127141
HMGA2 high mobility group AT-hook 2 0.108369
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.103801
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0787452
PDE4D phosphodiesterase 4D, cAMP-specific 0.0705292
YAP1 Yes-associated protein 1 0.0665164
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0547818
RAB7A RAB7A, member RAS oncogene family 0.0535303
DST dystonin 0.0532212
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0515513
NHSL1 NHS-like 1 0.0512013
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0504104
INTS6 integrator complex subunit 6 0.0469998
ANXA1 annexin A1 0.0442217
PCDH7 protocadherin 7 0.0420335
EGR1 early growth response 1 0.0414052
ACTG1 actin gamma 1 0.04089
AKAP12 A kinase (PRKA) anchor protein 12 0.0394793
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0390264
EHBP1 EH domain binding protein 1 0.0367238
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0352944
ZSWIM6 zinc finger, SWIM-type containing 6 0.033992
MSRB3 methionine sulfoxide reductase B3 0.0336816
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0333629
LDHA lactate dehydrogenase A 0.0330198
ADIPOR2 adiponectin receptor 2 0.0327061
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0313155
CUX1 cut-like homeobox 1 0.030849
MKI67 marker of proliferation Ki-67 0.0300838
LOC102724023 ES1 protein homolog, mitochondrial 0.0299034
MACF1 microtubule-actin crosslinking factor 1 0.0298386
MMP12 matrix metallopeptidase 12 0.0293834
NEBL nebulette 0.0282049
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0273854
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0270214
RIMS2 regulating synaptic membrane exocytosis 2 0.0269911
EDARADD EDAR-associated death domain 0.0260502
MAP1B microtubule-associated protein 1B 0.025476
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0245654
HSPA8 heat shock 70kDa protein 8 0.0245401
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0239855
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0237081
RASAL2 RAS protein activator like 2 0.0236931
MTAP methylthioadenosine phosphorylase 0.0233756
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0232855
TAS2R14 taste receptor, type 2, member 14 0.0230771
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.02269
SETX senataxin 0.022677
CSMD3 CUB and Sushi multiple domains 3 0.0226285
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0222136
LPP LIM domain containing preferred translocation partner in lipoma 0.0221903
PDGFC platelet derived growth factor C 0.022146
BABAM2 BRISC and BRCA1 A complex member 2 0.0219747
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0218511
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0217657
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.021141
EXOC4 exocyst complex component 4 0.0209603
L3MBTL4 l(3)mbt-like 4 (Drosophila) 0.0209369
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0205316
CEP112 centrosomal protein 112kDa 0.020238
ASPH aspartate beta-hydroxylase 0.0202058
CMIP c-Maf inducing protein 0.0196373
ANKRD11 ankyrin repeat domain 11 0.0193345
JMJD1C jumonji domain containing 1C 0.0192923
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0191625
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.018859
ASXL2 additional sex combs like transcriptional regulator 2 0.0188497
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0188141
PRDX1 peroxiredoxin 1 0.0184513
DDIT3 DNA-damage-inducible transcript 3 0.0183784
PCDH9 protocadherin 9 0.0183124
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0182793
LRMDA leucine rich melanocyte differentiation associated 0.0182474
NUP98 nucleoporin 98kDa 0.0180597
LRRC23 leucine rich repeat containing 23 0.0180505
ANKRD17 ankyrin repeat domain 17 0.0179904
DOCK1 dedicator of cytokinesis 1 0.0178649
RABGAP1L RAB GTPase activating protein 1-like 0.0177083
CREM cAMP responsive element modulator 0.0176041
MYPN myopalladin 0.017592
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0174947
RSU1 Ras suppressor protein 1 0.0172325
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0171801
PHACTR4 phosphatase and actin regulator 4 0.0170398
PDCD6 programmed cell death 6 0.0167321
DTNA dystrobrevin, alpha 0.016537
RRM2 ribonucleotide reductase M2 0.0164531
ASXL1 additional sex combs like transcriptional regulator 1 0.016403
HDAC9 histone deacetylase 9 0.0163605
CCSER1 coiled-coil serine-rich protein 1 0.0162657
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0161801
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0161659
TBCA tubulin folding cofactor A 0.0159865
TPM4 tropomyosin 4 0.0159356
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0159109
NAV3 neuron navigator 3 0.0158321
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0156157
R3HDM2 R3H domain containing 2 0.0154803
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0154482

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.105117
AREG amphiregulin -0.0721426
VIM vimentin -0.0715604
PCBP2 poly(rC) binding protein 2 -0.0623399
UBC ubiquitin C -0.061803
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0617664
RPS27A ribosomal protein S27a -0.060946
KDM3A lysine (K)-specific demethylase 3A -0.0494726
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0441537
CXADR coxsackie virus and adenovirus receptor -0.0433424
RPL23 ribosomal protein L23 -0.0414124
AHNAK AHNAK nucleoprotein -0.0397936
XPO1 exportin 1 -0.0374346
ZBTB20 zinc finger and BTB domain containing 20 -0.0373396
NEK7 NIMA-related kinase 7 -0.0359924
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0352856
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0347527
BIRC6 baculoviral IAP repeat containing 6 -0.0345075
TXNRD1 thioredoxin reductase 1 -0.0343319
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0343008
CPOX coproporphyrinogen oxidase -0.0328028
PUM2 pumilio RNA-binding family member 2 -0.0326177
MARCHF6 membrane associated ring-CH-type finger 6 -0.0315186
KLHL24 kelch-like family member 24 -0.0311181
ZNF292 zinc finger protein 292 -0.0307175
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0304545
EEF2 eukaryotic translation elongation factor 2 -0.0300525
MED13L mediator complex subunit 13-like -0.0299154
OGA O-GlcNAcase -0.0291431
YBX1 Y box binding protein 1 -0.0289888
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0288702
MYL12B myosin, light chain 12B, regulatory -0.0286394
ECT2 epithelial cell transforming 2 -0.0285055
TNPO1 transportin 1 -0.0276944
FXR1 fragile X mental retardation, autosomal homolog 1 -0.027075
RAD21 RAD21 homolog (S. pombe) -0.0267485
MATR3 matrin 3 -0.0259273
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0253195
ERRFI1 ERBB receptor feedback inhibitor 1 -0.025301
MGAT4C MGAT4 family, member C -0.0241308
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0236722
ARHGAP12 Rho GTPase activating protein 12 -0.0236684
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0235792
THOC1 THO complex 1 -0.0233371
PCNP PEST proteolytic signal containing nuclear protein -0.0231309
NCOR1 nuclear receptor corepressor 1 -0.0231046
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0229862
TFG TRK-fused gene -0.0224067
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0223309
GASK1B golgi associated kinase 1B -0.0223185
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.022273
CEP192 centrosomal protein 192kDa -0.0221099
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0218327
GARS1 glycyl-tRNA synthetase 1 -0.021656
CHD1 chromodomain helicase DNA binding protein 1 -0.0216179
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0215384
RBM27 RNA binding motif protein 27 -0.0213779
HMGB2 high mobility group box 2 -0.0213163
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0213129
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0211809
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0211057
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.020818
EDN1 endothelin 1 -0.0207839
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0207515
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0206714
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.020608
PNISR PNN-interacting serine/arginine-rich protein -0.0203655
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.020263
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0198502
NAP1L1 nucleosome assembly protein 1-like 1 -0.0197064
CDK19 cyclin-dependent kinase 19 -0.0195761
CEP95 centrosomal protein 95kDa -0.0195175
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0193211
LOC112694756 uncharaterized LOC112694756 -0.0192382
PREPL prolyl endopeptidase-like -0.0191115
RB1CC1 RB1-inducible coiled-coil 1 -0.0191063
RPLP1 ribosomal protein, large, P1 -0.0189524
PTMA prothymosin, alpha -0.018945
S100A6 S100 calcium binding protein A6 -0.0188704
ATP5F1B ATP synthase F1 subunit beta -0.0188598
OXR1 oxidation resistance 1 -0.0188386
RPS24 ribosomal protein S24 -0.0186809
ZFR zinc finger RNA binding protein -0.0186595
NPEPPS aminopeptidase puromycin sensitive -0.0185472
PTMS parathymosin -0.0183188
BRWD1 bromodomain and WD repeat domain containing 1 -0.0181579
KIF5B kinesin family member 5B -0.0181551
ADAM17 ADAM metallopeptidase domain 17 -0.0181405
BCAS3 breast carcinoma amplified sequence 3 -0.0180164
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0177731
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0177443
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0176635
ZMYM2 zinc finger, MYM-type 2 -0.0172667
CAMTA1 calmodulin binding transcription activator 1 -0.0172627
FBXL20 F-box and leucine-rich repeat protein 20 -0.0172418
NKTR natural killer cell triggering receptor -0.0171591
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0171567
YBX3 Y box binding protein 3 -0.0171213
MON2 MON2 homolog (S. cerevisiae) -0.0165229
COG5 component of oligomeric golgi complex 5 -0.016511