LB-100_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description LB-100 perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the LB-100_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.150339
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.114611
TP63 tumor protein p63 0.10427
PSD3 pleckstrin and Sec7 domain containing 3 0.0976965
HLA-B major histocompatibility complex, class I, B 0.0840046
ZDHHC14 zinc finger, DHHC-type containing 14 0.0763246
CD44 CD44 molecule (Indian blood group) 0.0747999
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0682061
RPS12 ribosomal protein S12 0.0614526
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0612095
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0593564
TSC22D1 TSC22 domain family, member 1 0.0587667
SP100 SP100 nuclear antigen 0.0557209
ARHGAP5 Rho GTPase activating protein 5 0.0530132
MACF1 microtubule-actin crosslinking factor 1 0.0522616
RPL37A ribosomal protein L37a 0.0512545
RPL26 ribosomal protein L26 0.0508231
HDAC9 histone deacetylase 9 0.050513
BCAR3 breast cancer anti-estrogen resistance 3 0.0488141
PDE10A phosphodiesterase 10A 0.0487019
TNS3 tensin 3 0.0482396
CADM2 cell adhesion molecule 2 0.0465603
TPT1 tumor protein, translationally-controlled 1 0.0452804
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0426881
RPS27A ribosomal protein S27a 0.0424545
CAPRIN2 caprin family member 2 0.0422253
RPS3 ribosomal protein S3 0.0409021
EHBP1 EH domain binding protein 1 0.0407291
INTS6 integrator complex subunit 6 0.0394906
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0388076
CSMD3 CUB and Sushi multiple domains 3 0.0385975
IFI6 interferon, alpha-inducible protein 6 0.0383032
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0379317
RIGI RNA sensor RIG-I 0.0373066
RPS8 ribosomal protein S8 0.0368961
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0364091
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0354858
RPL31 ribosomal protein L31 0.0353263
WWTR1 WW domain containing transcription regulator 1 0.0346886
EFNA5 ephrin-A5 0.0338968
AEBP2 AE binding protein 2 0.0335874
PRELID2 PRELI domain containing 2 0.0335714
PLSCR1 phospholipid scramblase 1 0.0330984
SQSTM1 sequestosome 1 0.032566
IFIH1 interferon induced with helicase C domain 1 0.0324336
ZSWIM6 zinc finger, SWIM-type containing 6 0.0319358
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0318169
RUNX1 runt-related transcription factor 1 0.0316842
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0310026
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0309675
NEK10 NIMA-related kinase 10 0.0300654
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0288353
WARS1 tryptophanyl-tRNA synthetase 1 0.0286645
PMP22 peripheral myelin protein 22 0.0284741
FMNL2 formin-like 2 0.0283513
SDK1 sidekick cell adhesion molecule 1 0.0279552
RAD51B RAD51 paralog B 0.0270958
DNER delta/notch-like EGF repeat containing 0.0270561
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0269011
MYOF myoferlin 0.0264041
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0262702
VCL vinculin 0.0262599
HOMER1 homer scaffolding protein 1 0.0262511
RNF213 ring finger protein 213 0.0261628
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0260541
RPL12 ribosomal protein L12 0.0256085
B2M beta-2-microglobulin 0.0254905
EPHA4 EPH receptor A4 0.0250037
GOLGB1 golgin B1 0.0244798
LPP LIM domain containing preferred translocation partner in lipoma 0.0244403
RPS6 ribosomal protein S6 0.0236983
NAP1L1 nucleosome assembly protein 1-like 1 0.023513
KLF6 Kruppel-like factor 6 0.0230975
HLA-E major histocompatibility complex, class I, E 0.0229801
PATJ PATJ crumbs cell polarity complex component 0.0226424
ZBTB38 zinc finger and BTB domain containing 38 0.0226291
LOC102724023 ES1 protein homolog, mitochondrial 0.0225548
RPS17 ribosomal protein S17 0.0221941
TTC3 tetratricopeptide repeat domain 3 0.0218802
STK17A serine/threonine kinase 17a 0.0217594
CFLAR CASP8 and FADD-like apoptosis regulator 0.0215723
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0215287
RPL37 ribosomal protein L37 0.0207589
DPH6 diphthamine biosynthesis 6 0.020734
BICD1 bicaudal D homolog 1 (Drosophila) 0.0207338
BZW1 basic leucine zipper and W2 domains 1 0.020684
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0200489
PTPRF protein tyrosine phosphatase, receptor type, F 0.0199823
RPS29 ribosomal protein S29 0.0198479
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0195701
DOCK1 dedicator of cytokinesis 1 0.0193964
LDHA lactate dehydrogenase A 0.0192917
AHNAK2 AHNAK nucleoprotein 2 0.0191444
DNAH14 dynein, axonemal, heavy chain 14 0.0190449
NPAS2 neuronal PAS domain protein 2 0.0190232
PTMA prothymosin, alpha 0.0188727
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0188625
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0188551
TGM2 transglutaminase 2 0.0188264
OSBPL8 oxysterol binding protein-like 8 0.0185848

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.116851
MT2A metallothionein 2A -0.0987472
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0963051
POTEF POTE ankyrin domain family, member F -0.0879839
LOC112694756 uncharaterized LOC112694756 -0.0608757
TMSB10 thymosin beta 10 -0.0540339
RTN4 reticulon 4 -0.0521804
RAI1 retinoic acid induced 1 -0.048126
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0458144
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0453612
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0396216
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0392232
CENPF centromere protein F, 350/400kDa -0.0390165
GARS1 glycyl-tRNA synthetase 1 -0.0385574
ACTG1 actin gamma 1 -0.0363685
NAMPT nicotinamide phosphoribosyltransferase -0.0357574
TMEM41B transmembrane protein 41B -0.0344345
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0322645
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0320939
SMC4 structural maintenance of chromosomes 4 -0.0319553
KMT2E lysine (K)-specific methyltransferase 2E -0.0311767
EZR ezrin -0.0309135
MKI67 marker of proliferation Ki-67 -0.0301839
FTL ferritin, light polypeptide -0.029661
XPO1 exportin 1 -0.0294052
ZMYND8 zinc finger, MYND-type containing 8 -0.0292318
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0286432
FOSL1 FOS-like antigen 1 -0.0282687
MT1X metallothionein 1X -0.0278244
RBM25 RNA binding motif protein 25 -0.027718
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0276808
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0276037
SRGN serglycin -0.0270812
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0268884
MIS18BP1 MIS18 binding protein 1 -0.0267849
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0263428
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0261409
HMGA1 high mobility group AT-hook 1 -0.0240825
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0239794
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0239308
CEP170 centrosomal protein 170kDa -0.0237691
ADGRG6 adhesion G protein-coupled receptor G6 -0.0237472
EEF2 eukaryotic translation elongation factor 2 -0.0237422
S100A6 S100 calcium binding protein A6 -0.023715
SEPTIN7 septin 7 -0.0236478
YBX1 Y box binding protein 1 -0.0236283
RRM2 ribonucleotide reductase M2 -0.0230263
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0226645
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0224403
EGR1 early growth response 1 -0.0223579
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0221523
YBX3 Y box binding protein 3 -0.0219873
ADAM17 ADAM metallopeptidase domain 17 -0.0217888
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0215559
PGK1 phosphoglycerate kinase 1 -0.0214957
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0207409
TPX2 TPX2, microtubule-associated -0.020518
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0201571
ECT2 epithelial cell transforming 2 -0.0200751
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0199782
POM121C POM121 transmembrane nucleoporin C -0.0197049
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.019649
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0196099
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.019545
RPL5 ribosomal protein L5 -0.0194724
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0192604
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0192081
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0191565
PKM pyruvate kinase, muscle -0.019144
PCBP2 poly(rC) binding protein 2 -0.0190784
WDR45B WD repeat domain 45B -0.0189839
SBF2 SET binding factor 2 -0.018983
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0188936
DIAPH3 diaphanous-related formin 3 -0.0185734
JMJD1C jumonji domain containing 1C -0.0185102
OLA1 Obg-like ATPase 1 -0.0183748
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0181914
SRPK2 SRSF protein kinase 2 -0.0181152
EIF5B eukaryotic translation initiation factor 5B -0.0181045
TSC22D2 TSC22 domain family, member 2 -0.0180607
ANLN anillin, actin binding protein -0.0180567
BIRC6 baculoviral IAP repeat containing 6 -0.0176307
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.017346
SGO2 shugoshin 2 -0.0172229
WDR26 WD repeat domain 26 -0.0169315
KIF14 kinesin family member 14 -0.0168641
EMP1 epithelial membrane protein 1 -0.0168195
PRDX1 peroxiredoxin 1 -0.0168184
TM9SF3 transmembrane 9 superfamily member 3 -0.0167336
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0167149
NUP58 nucleoporin 58 -0.0166918
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0166408
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0166286
ANKRD28 ankyrin repeat domain 28 -0.0163419
S100A10 S100 calcium binding protein A10 -0.0163373
ADAM9 ADAM metallopeptidase domain 9 -0.0163194
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -0.0163193
TNPO1 transportin 1 -0.0161986
SPRY4 sprouty homolog 4 (Drosophila) -0.0161202
ANXA1 annexin A1 -0.0160604