LB-100_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description LB-100 perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the LB-100_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZSWIM6 zinc finger, SWIM-type containing 6 0.118438
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.117523
INTS6 integrator complex subunit 6 0.0933539
MACF1 microtubule-actin crosslinking factor 1 0.0852485
HMGA2 high mobility group AT-hook 2 0.0785378
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0768914
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.076468
LDHA lactate dehydrogenase A 0.0755515
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0712268
DST dystonin 0.0702456
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0639505
SLC38A2 solute carrier family 38, member 2 0.0617939
BICD1 bicaudal D homolog 1 (Drosophila) 0.0608367
SQSTM1 sequestosome 1 0.0588987
FNDC3B fibronectin type III domain containing 3B 0.0576346
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0559697
SH3KBP1 SH3-domain kinase binding protein 1 0.0556118
CD44 CD44 molecule (Indian blood group) 0.0478623
PKM pyruvate kinase, muscle 0.0476377
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0468617
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0465489
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0437683
SVIL supervillin 0.0432464
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0425851
EGFR epidermal growth factor receptor 0.0417132
PRKCA protein kinase C, alpha 0.0416164
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0404814
TLE4 transducin-like enhancer of split 4 0.0391587
AKAP12 A kinase (PRKA) anchor protein 12 0.038875
POTEF POTE ankyrin domain family, member F 0.0384538
EXT1 exostosin glycosyltransferase 1 0.0378155
RIGI RNA sensor RIG-I 0.037632
IGF2 insulin-like growth factor 2 0.0373527
BCAR3 breast cancer anti-estrogen resistance 3 0.0359548
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0357014
PRR16 proline rich 16 0.0343133
SAMD4A sterile alpha motif domain containing 4A 0.0341935
COL5A1 collagen, type V, alpha 1 0.0341843
SIK2 salt-inducible kinase 2 0.0341089
ITGB4 integrin, beta 4 0.0335047
ENO2 enolase 2 (gamma, neuronal) 0.0329963
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0324422
PRSS23 protease, serine, 23 0.0322572
RHOBTB3 Rho-related BTB domain containing 3 0.0321799
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0320294
JAK1 Janus kinase 1 0.0311948
SDC4 syndecan 4 0.0311105
UBE2H ubiquitin-conjugating enzyme E2H 0.0310749
LPP LIM domain containing preferred translocation partner in lipoma 0.0309655
PCED1B PC-esterase domain containing 1B 0.0308613
FNDC3A fibronectin type III domain containing 3A 0.0307047
RUNX1 runt-related transcription factor 1 0.0306276
TIMP2 TIMP metallopeptidase inhibitor 2 0.0305624
ZFP36L1 ZFP36 ring finger protein-like 1 0.0305067
RAI14 retinoic acid induced 14 0.0301876
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0299124
ZBTB20 zinc finger and BTB domain containing 20 0.0298973
TTC17 tetratricopeptide repeat domain 17 0.0297523
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0297255
PODXL podocalyxin-like 0.0296942
ANGPTL4 angiopoietin-like 4 0.0293276
DPYD dihydropyrimidine dehydrogenase 0.0288975
ANKRD11 ankyrin repeat domain 11 0.0288571
JUN jun proto-oncogene 0.0286861
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.02839
IRAK2 interleukin-1 receptor-associated kinase 2 0.0282524
MPRIP myosin phosphatase Rho interacting protein 0.0282335
BIRC3 baculoviral IAP repeat containing 3 0.0281483
LOC102724023 ES1 protein homolog, mitochondrial 0.0280154
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0279888
ENO1 enolase 1, (alpha) 0.0279301
SIK3 SIK family kinase 3 0.0276878
RABGAP1L RAB GTPase activating protein 1-like 0.0275722
TIMP1 TIMP metallopeptidase inhibitor 1 0.0273835
MAML3 mastermind-like 3 (Drosophila) 0.0273676
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0272982
RNF217 ring finger protein 217 0.0268595
CLIC4 chloride intracellular channel 4 0.0267
B2M beta-2-microglobulin 0.0266897
ESYT2 extended synaptotagmin-like protein 2 0.0261756
GOLGB1 golgin B1 0.0260687
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0259258
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.0257106
CHD9 chromodomain helicase DNA binding protein 9 0.0253824
KLHL29 kelch-like family member 29 0.0251714
KDM6B lysine (K)-specific demethylase 6B 0.0251663
N4BP2L2 NEDD4 binding protein 2-like 2 0.0251225
PLEK2 pleckstrin 2 0.0248247
ITPRID2 ITPR interacting domain containing 2 0.0247724
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0246621
LMO7 LIM domain 7 0.024467
TRAM2 translocation associated membrane protein 2 0.0243523
RNASEH2A ribonuclease H2, subunit A 0.0243477
IRF1 interferon regulatory factor 1 0.0243394
SMAD3 SMAD family member 3 0.0243123
FAM177A1 family with sequence similarity 177, member A1 0.0242629
MSN moesin 0.0240631
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0239394
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0237957
MYO10 myosin X 0.0233517

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.0931952
RBM39 RNA binding motif protein 39 -0.0849455
ZNF292 zinc finger protein 292 -0.0683553
TXNRD1 thioredoxin reductase 1 -0.0664623
YAP1 Yes-associated protein 1 -0.065925
TRIO trio Rho guanine nucleotide exchange factor -0.0653549
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0647619
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0643744
SMYD3 SET and MYND domain containing 3 -0.0631941
ECT2 epithelial cell transforming 2 -0.0615737
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0608337
CENPF centromere protein F, 350/400kDa -0.0606927
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0596904
DSCAM Down syndrome cell adhesion molecule -0.0596345
SMC4 structural maintenance of chromosomes 4 -0.0592113
TMSB10 thymosin beta 10 -0.0589427
TPX2 TPX2, microtubule-associated -0.0588778
LOC112694756 uncharaterized LOC112694756 -0.0579895
ANKRD28 ankyrin repeat domain 28 -0.0549404
VIM vimentin -0.0532088
SNX14 sorting nexin 14 -0.0521477
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0505978
COPB1 coatomer protein complex, subunit beta 1 -0.0505714
SETD5 SET domain containing 5 -0.0497527
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0488539
NIPBL Nipped-B homolog (Drosophila) -0.0488063
RPL35A ribosomal protein L35a -0.0485374
CANX calnexin -0.0481866
SOD2 superoxide dismutase 2, mitochondrial -0.0480828
ETF1 eukaryotic translation termination factor 1 -0.0480217
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0476423
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0470128
NUP58 nucleoporin 58 -0.0468016
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0465965
SEPTIN7 septin 7 -0.0456121
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0451714
STRN3 striatin, calmodulin binding protein 3 -0.0450272
TMEM123 transmembrane protein 123 -0.0448173
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0446372
MIS18BP1 MIS18 binding protein 1 -0.0432743
DERA deoxyribose-phosphate aldolase (putative) -0.0419053
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0418845
PHF20 PHD finger protein 20 -0.041554
ANLN anillin, actin binding protein -0.0414608
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0408171
GNAS GNAS complex locus -0.0402507
HELZ helicase with zinc finger -0.0401673
DLG1 discs, large homolog 1 (Drosophila) -0.0400603
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0398951
SCAF11 SR-related CTD-associated factor 11 -0.039424
LCORL ligand dependent nuclear receptor corepressor-like -0.0393545
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0390189
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.038647
DEK DEK proto-oncogene -0.0386432
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0384275
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0382723
NOP58 NOP58 ribonucleoprotein -0.037549
TENT2 terminal nucleotidyltransferase 2 -0.0374445
WAC WW domain containing adaptor with coiled-coil -0.0373333
MT2A metallothionein 2A -0.0370974
RPLP1 ribosomal protein, large, P1 -0.0368506
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0364696
WDR45B WD repeat domain 45B -0.0363351
KIAA1328 KIAA1328 -0.036293
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0360766
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0357876
BIRC2 baculoviral IAP repeat containing 2 -0.035697
SGO2 shugoshin 2 -0.0356516
ZFAND3 zinc finger, AN1-type domain 3 -0.0355344
XPO1 exportin 1 -0.0354415
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0353692
IARS1 isoleucyl-tRNA synthetase 1 -0.0353567
ASXL1 additional sex combs like transcriptional regulator 1 -0.0351041
SRSF11 serine/arginine-rich splicing factor 11 -0.0346483
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0342785
RRBP1 ribosome binding protein 1 -0.0342374
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0341144
HJURP Holliday junction recognition protein -0.0340096
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0339571
GOLT1B golgi transport 1B -0.0336489
HMGB2 high mobility group box 2 -0.0336301
OSMR oncostatin M receptor -0.0333613
MATR3 matrin 3 -0.0332422
RPL30 ribosomal protein L30 -0.0332028
KIF4A kinesin family member 4A -0.0329483
SRP54 signal recognition particle 54kDa -0.0328703
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0328078
PRRC1 proline-rich coiled-coil 1 -0.0321836
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0321741
PRR11 proline rich 11 -0.0320981
RPL4 ribosomal protein L4 -0.0316768
PHIP pleckstrin homology domain interacting protein -0.0316622
CUL3 cullin 3 -0.0315998
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0315341
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0314468
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0312581
MARCHF6 membrane associated ring-CH-type finger 6 -0.0311552
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0311279
FAF2 Fas associated factor family member 2 -0.0310062
TBC1D5 TBC1 domain family, member 5 -0.0309127