LN-405 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Glioblastoma Tumour (Cell Model Passports, SIDM00343)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00343
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Genes

199 proteins associated with the cell line LN-405 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD12 abhydrolase domain containing 12
ACOT9 acyl-CoA thioesterase 9
ACTA1 actin, alpha 1, skeletal muscle
ACTBL2 actin, beta-like 2
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALMS1 Alstrom syndrome protein 1
ANKH ANKH inorganic pyrophosphate transport regulator
AP2M1 adaptor-related protein complex 2, mu 1 subunit
APMAP adipocyte plasma membrane associated protein
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ARMCX3 armadillo repeat containing, X-linked 3
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
CALR calreticulin
CARS2 cysteinyl-tRNA synthetase 2, mitochondrial (putative)
CDC50A cell division cycle 50 P4-ATPase accessory subunit A
CHMP6 charged multivesicular body protein 6
CNN1 calponin 1, basic, smooth muscle
COL6A1 collagen, type VI, alpha 1
CP ceruloplasmin (ferroxidase)
CTSC cathepsin C
CYB5R3 cytochrome b5 reductase 3
DAGLB diacylglycerol lipase, beta
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic)
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FLOT1 flotillin 1
FZD7 frizzled class receptor 7
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)
GLIPR2 GLI pathogenesis-related 2
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
GPAA1 glycosylphosphatidylinositol anchor attachment 1
GSPT2 G1 to S phase transition 2
HLA-A major histocompatibility complex, class I, A
HLA-H major histocompatibility complex, class I, H (pseudogene)
HM13 histocompatibility (minor) 13
HPSE heparanase
IER3IP1 immediate early response 3 interacting protein 1
IGFBP7 insulin-like growth factor binding protein 7
IGSF8 immunoglobulin superfamily, member 8
IRAK1 interleukin-1 receptor-associated kinase 1
JAG1 jagged 1
KRT1 keratin 1, type II
KRT9 keratin 9, type I
LAMP2 lysosomal-associated membrane protein 2
LMF2 lipase maturation factor 2
LNPEP leucyl/cystinyl aminopeptidase
LRRC7 leucine rich repeat containing 7
MAN2B1 mannosidase, alpha, class 2B, member 1
MARCKS myristoylated alanine-rich protein kinase C substrate
MAVS mitochondrial antiviral signaling protein
MOSPD2 motile sperm domain containing 2
MVD mevalonate (diphospho) decarboxylase
MYH14 myosin, heavy chain 14, non-muscle
NDC1 NDC1 transmembrane nucleoporin
NEFL neurofilament, light polypeptide
NLRP2 NLR family, pyrin domain containing 2
NOP53 NOP53 ribosome biogenesis factor
NTPCR nucleoside-triphosphatase, cancer-related
P3H1 prolyl 3-hydroxylase 1
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
PIGS phosphatidylinositol glycan anchor biosynthesis, class S
PLRG1 pleiotropic regulator 1
PRDX4 peroxiredoxin 4
PTGFRN prostaglandin F2 receptor inhibitor
RAB13 RAB13, member RAS oncogene family
RAB23 RAB23, member RAS oncogene family
RAB29 RAB29, member RAS oncogene family
RAB32 RAB32, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RALY RALY heterogeneous nuclear ribonucleoprotein
REEP5 receptor accessory protein 5
RHOT2 ras homolog family member T2
RPN2 ribophorin II
SAMHD1 SAM domain and HD domain 1
SEC61G Sec61 gamma subunit
SEC63 SEC63 homolog (S. cerevisiae)
SF3B3 splicing factor 3b, subunit 3, 130kDa
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter)
SLC25A11 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SOAT1 sterol O-acyltransferase 1
SOD3 superoxide dismutase 3, extracellular
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma)
STAT1 signal transducer and activator of transcription 1, 91kDa
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
STXBP3 syntaxin binding protein 3
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TBC1D20 TBC1 domain family, member 20
TGFBI transforming growth factor, beta-induced, 68kDa
TMCO1 transmembrane and coiled-coil domains 1
TMX3 thioredoxin-related transmembrane protein 3
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
YIPF5 Yip1 domain family, member 5
ZMPSTE24 zinc metallopeptidase STE24

Symbol Name
ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8
ANAPC10 anaphase promoting complex subunit 10
ANKRD17 ankyrin repeat domain 17
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
ARPC5L actin related protein 2/3 complex, subunit 5-like
B4GALT7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
BRMS1 breast cancer metastasis suppressor 1
C5ORF24 chromosome 5 open reading frame 24
CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6
CHD5 chromodomain helicase DNA binding protein 5
CLDN1 claudin 1
COG3 component of oligomeric golgi complex 3
DCP1A decapping mRNA 1A
DERA deoxyribose-phosphate aldolase (putative)
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
DOCK8 dedicator of cytokinesis 8
EED embryonic ectoderm development
ETFA electron-transfer-flavoprotein, alpha polypeptide
ETFB electron-transfer-flavoprotein, beta polypeptide
FAM207A family with sequence similarity 207, member A
FERMT1 fermitin family member 1
FKBP15 FK506 binding protein 15, 133kDa
FYCO1 FYVE and coiled-coil domain containing 1
GCA grancalcin, EF-hand calcium binding protein
GNG8 guanine nucleotide binding protein (G protein), gamma 8
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMMR hyaluronan-mediated motility receptor (RHAMM)
HRCT1 histidine rich carboxyl terminus 1
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
LARP7 La ribonucleoprotein domain family, member 7
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LZTFL1 leucine zipper transcription factor-like 1
MAP3K3 mitogen-activated protein kinase kinase kinase 3
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MBD3 methyl-CpG binding domain protein 3
MCRIP2 MAPK regulated corepressor interacting protein 2
MED19 mediator complex subunit 19
MED20 mediator complex subunit 20
MMP3 matrix metallopeptidase 3
MNAT1 MNAT CDK-activating kinase assembly factor 1
MRGPRG-AS1 MRGPRG antisense RNA 1
NELFE negative elongation factor complex member E
NEMF nuclear export mediator factor
NOVA2 neuro-oncological ventral antigen 2
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
OSGEP O-sialoglycoprotein endopeptidase
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1
PDF peptide deformylase (mitochondrial)
PHLDA2 pleckstrin homology-like domain, family A, member 2
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1
PKP4 plakophilin 4
PLAUR plasminogen activator, urokinase receptor
PLS1 plastin 1
PNISR PNN-interacting serine/arginine-rich protein
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
PPAT phosphoribosyl pyrophosphate amidotransferase
PRCC papillary renal cell carcinoma (translocation-associated)
PTK2 protein tyrosine kinase 2
PUM1 pumilio RNA-binding family member 1
PXMP4 peroxisomal membrane protein 4, 24kDa
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RNF214 ring finger protein 214
RPP38 ribonuclease P/MRP 38kDa subunit
RPS5 ribosomal protein S5
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RUFY1 RUN and FYVE domain containing 1
RWDD4 RWD domain containing 4
RXRB retinoid X receptor, beta
SAP30 Sin3A-associated protein, 30kDa
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCAF8 SR-related CTD-associated factor 8
SCARF2 scavenger receptor class F, member 2
SFSWAP splicing factor, suppressor of white-apricot family
SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein
SMAP2 small ArfGAP2
SNRPC small nuclear ribonucleoprotein polypeptide C
SPAG5 sperm associated antigen 5
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SRSF2 serine/arginine-rich splicing factor 2
SSX8 synovial sarcoma, X breakpoint 8
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STAMBPL1 STAM binding protein-like 1
STARD9 StAR-related lipid transfer (START) domain containing 9
STK38L serine/threonine kinase 38 like
SYF2 SYF2 pre-mRNA-splicing factor
TACC2 transforming, acidic coiled-coil containing protein 2
THUMPD3 THUMP domain containing 3
TREX1 three prime repair exonuclease 1
TSNAX translin-associated factor X
USP19 ubiquitin specific peptidase 19
USP24 ubiquitin specific peptidase 24
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae)
WDR26 WD repeat domain 26
XPOT exportin, tRNA
YPEL5 yippee-like 5 (Drosophila)
ZNF516 zinc finger protein 516
ZNF787 zinc finger protein 787