LS-180 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Colorectal Carcinoma Tumour (Cell Model Passports, SIDM00680)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00680
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Genes

197 proteins associated with the cell line LS-180 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD11 abhydrolase domain containing 11
ACAA1 acetyl-CoA acyltransferase 1
ACTR10 actin-related protein 10 homolog (S. cerevisiae)
AGR2 anterior gradient 2
AKAP1 A kinase (PRKA) anchor protein 1
ALDH1B1 aldehyde dehydrogenase 1 family, member B1
ASB6 ankyrin repeat and SOCS box containing 6
ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
BCLAF1 BCL2-associated transcription factor 1
BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1
C5ORF24 chromosome 5 open reading frame 24
CDK12 cyclin-dependent kinase 12
CENPB centromere protein B, 80kDa
COX19 COX19 cytochrome c oxidase assembly factor
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CTDSP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DENND2A DENN/MADD domain containing 2A
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2
DST dystonin
ECHDC2 enoyl CoA hydratase domain containing 2
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial
ELAC2 elaC ribonuclease Z 2
EPCAM epithelial cell adhesion molecule
EPHA1 EPH receptor A1
EPPK1 epiplakin 1
ETHE1 ethylmalonic encephalopathy 1
FAM136A family with sequence similarity 136, member A
FXN frataxin
GATB glutamyl-tRNA(Gln) amidotransferase, subunit B
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C
GCAT glycine C-acetyltransferase
GOSR1 golgi SNAP receptor complex member 1
GRSF1 G-rich RNA sequence binding factor 1
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HSPD1 heat shock 60kDa protein 1 (chaperonin)
IRAK1 interleukin-1 receptor-associated kinase 1
ITGA6 integrin, alpha 6
LOC105371745 uncharacterized LOC105371745
LOC105373961 uncharacterized LOC105373961
LRP1 low density lipoprotein receptor-related protein 1
MARS2 methionyl-tRNA synthetase 2, mitochondrial
MED11 mediator complex subunit 11
MED9 mediator complex subunit 9
METTL3 methyltransferase like 3
MISP mitotic spindle positioning
MLEC malectin
MRPL14 mitochondrial ribosomal protein L14
MRPL32 mitochondrial ribosomal protein L32
MRPL33 mitochondrial ribosomal protein L33
MRPL35 mitochondrial ribosomal protein L35
MRPL39 mitochondrial ribosomal protein L39
MRPL40 mitochondrial ribosomal protein L40
MRPL43 mitochondrial ribosomal protein L43
MRPL44 mitochondrial ribosomal protein L44
MRPS18A mitochondrial ribosomal protein S18A
MRPS26 mitochondrial ribosomal protein S26
MRPS28 mitochondrial ribosomal protein S28
MRPS31 mitochondrial ribosomal protein S31
MRPS6 mitochondrial ribosomal protein S6
MRPS9 mitochondrial ribosomal protein S9
MTERF3 mitochondrial transcription termination factor 3
MUC16 mucin 16, cell surface associated
NDUFA7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa
NELL1 NEL-like 1 (chicken)
NME7 NME/NM23 family member 7
NOP14 NOP14 nucleolar protein
NUP50 nucleoporin 50kDa
PDHX pyruvate dehydrogenase complex, component X
PIGR polymeric immunoglobulin receptor
PMPCA peptidase (mitochondrial processing) alpha
PMPCB peptidase (mitochondrial processing) beta
POLR2F polymerase (RNA) II (DNA directed) polypeptide F
RANBP2 RAN binding protein 2
RPL22L1 ribosomal protein L22-like 1
RREB1 ras responsive element binding protein 1
RRP1B ribosomal RNA processing 1B
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae)
SIDT1 SID1 transmembrane family, member 1
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SOX6 SRY (sex determining region Y)-box 6
SPTAN1 spectrin, alpha, non-erythrocytic 1
SPTBN1 spectrin, beta, non-erythrocytic 1
SRPK1 SRSF protein kinase 1
SRRM1 serine/arginine repetitive matrix 1
SURF6 surfeit 6
TACC2 transforming, acidic coiled-coil containing protein 2
TCF25 transcription factor 25 (basic helix-loop-helix)
TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast)
TNS4 tensin 4
TRIT1 tRNA isopentenyltransferase 1
TSFM Ts translation elongation factor, mitochondrial
TTC19 tetratricopeptide repeat domain 19
TTTY16 testis-specific transcript, Y-linked 16 (non-protein coding)
ZBTB7A zinc finger and BTB domain containing 7A
ZNF629 zinc finger protein 629

Symbol Name
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
AK5 adenylate kinase 5
AKAP8L A kinase (PRKA) anchor protein 8-like
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATP11A ATPase, class VI, type 11A
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
BAG4 BCL2-associated athanogene 4
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
BLVRA biliverdin reductase A
C12ORF43 chromosome 12 open reading frame 43
CAMK1 calcium/calmodulin-dependent protein kinase I
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast)
CDK5RAP1 CDK5 regulatory subunit associated protein 1
CEP41 centrosomal protein 41kDa
CFL2 cofilin 2 (muscle)
DAAM1 dishevelled associated activator of morphogenesis 1
DCAKD dephospho-CoA kinase domain containing
DLGAP4 discs, large (Drosophila) homolog-associated protein 4
EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa
ELL elongation factor RNA polymerase II
ERCC6L excision repair cross-complementation group 6-like
EXT2 exostosin glycosyltransferase 2
FAHD2A fumarylacetoacetate hydrolase domain containing 2A
FAM114A2 family with sequence similarity 114, member A2
FBXO22 F-box protein 22
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7
GDI1 GDP dissociation inhibitor 1
GEMIN6 gem (nuclear organelle) associated protein 6
GIMAP7 GTPase, IMAP family member 7
GLYCTK glycerate kinase
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa
GULP1 GULP, engulfment adaptor PTB domain containing 1
HEPH hephaestin
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4
ING5 inhibitor of growth family, member 5
INPPL1 inositol polyphosphate phosphatase-like 1
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
JMY junction mediating and regulatory protein, p53 cofactor
KANSL3 KAT8 regulatory NSL complex subunit 3
KATNA1 katanin p60 (ATPase containing) subunit A 1
KRT2 keratin 2, type II
KRT9 keratin 9, type I
LAGE3 L antigen family, member 3
LGALS8 lectin, galactoside-binding, soluble, 8
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
MAOB monoamine oxidase B
MAP3K20 mitogen-activated protein kinase kinase kinase 20
MARCKS myristoylated alanine-rich protein kinase C substrate
MCDR3 macular dystrophy, retinal 3
MED24 mediator complex subunit 24
MESTP1 mesoderm specific transcript pseudogene 1
MIER1 mesoderm induction early response 1, transcriptional regulator
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
MTCL1 microtubule crosslinking factor 1
MUC2 mucin 2, oligomeric mucus/gel-forming
MYO6 myosin VI
NADSYN1 NAD synthetase 1
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NBN nibrin
NCAPG non-SMC condensin I complex, subunit G
NHSL1 NHS-like 1
OR4A7P olfactory receptor, family 4, subfamily A, member 7 pseudogene
PGM1 phosphoglucomutase 1
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PKLR pyruvate kinase, liver and RBC
POM121C POM121 transmembrane nucleoporin C
POMK protein-O-mannose kinase
POSTN periostin, osteoblast specific factor
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PSME4 proteasome (prosome, macropain) activator subunit 4
PVOP2 Pelvic organ prolapse, susceptibility to, 2
PXK PX domain containing serine/threonine kinase
RAD50 RAD50 homolog (S. cerevisiae)
RAP2C RAP2C, member of RAS oncogene family
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RSRC2 arginine/serine-rich coiled-coil 2
SH3PXD2B SH3 and PX domains 2B
SKA3 spindle and kinetochore associated complex subunit 3
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SLC25A29 solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SMYD3 SET and MYND domain containing 3
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SSNA1 Sjogren syndrome nuclear autoantigen 1
TFIP11 tuftelin interacting protein 11
TMEM209 transmembrane protein 209
TP53RK TP53 regulating kinase
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
TRMT2B tRNA methyltransferase 2 homolog B (S. cerevisiae)
TSLIG1 tRNA splicing ligase complex subunit 1
TUBAL3 tubulin, alpha-like 3
UBE2C ubiquitin-conjugating enzyme E2C
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
USP37 ubiquitin specific peptidase 37
WBP4 WW domain binding protein 4
ZC3HC1 zinc finger, C3HC-type containing 1
ZNF148 zinc finger protein 148
ZZZ3 zinc finger, ZZ-type containing 3