Larotrectinib sulfate_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.177095
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.105658
FTH1 ferritin, heavy polypeptide 1 0.0901179
THSD4 thrombospondin, type I, domain containing 4 0.0819748
IGFBP3 insulin-like growth factor binding protein 3 0.0765348
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0726204
GRB10 growth factor receptor-bound protein 10 0.0692426
RNF213 ring finger protein 213 0.0682387
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0642115
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0631354
SOD2 superoxide dismutase 2, mitochondrial 0.0623686
AKAP12 A kinase (PRKA) anchor protein 12 0.0619017
NAV2 neuron navigator 2 0.0589605
VIM vimentin 0.0583872
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0563438
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0529344
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0524062
FNDC3B fibronectin type III domain containing 3B 0.0473101
EFNA5 ephrin-A5 0.0464335
KIRREL3 kin of IRRE like 3 (Drosophila) 0.0438425
CDH4 cadherin 4, type 1, R-cadherin (retinal) 0.0434317
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0426282
TNS1 tensin 1 0.0423232
AUTS2 autism susceptibility candidate 2 0.0418132
EGFR epidermal growth factor receptor 0.0405713
KLF7 Kruppel-like factor 7 (ubiquitous) 0.039452
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0382367
RND3 Rho family GTPase 3 0.0372261
KDM7A lysine (K)-specific demethylase 7A 0.0359278
FMNL2 formin-like 2 0.035685
GPC6 glypican 6 0.0355222
BASP1 brain abundant, membrane attached signal protein 1 0.035063
DAPK1 death-associated protein kinase 1 0.0347428
LTBP4 latent transforming growth factor beta binding protein 4 0.0339405
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0337459
BHLHE40 basic helix-loop-helix family, member e40 0.0332575
EPAS1 endothelial PAS domain protein 1 0.0329147
RIGI RNA sensor RIG-I 0.0326837
PLSCR1 phospholipid scramblase 1 0.0318897
TAPBP TAP binding protein (tapasin) 0.0315641
NRIP1 nuclear receptor interacting protein 1 0.0304334
TBC1D22A TBC1 domain family, member 22A 0.0300635
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0300034
ZFP36L1 ZFP36 ring finger protein-like 1 0.0297794
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0294348
C1D C1D nuclear receptor corepressor 0.0292821
ZFP36 ZFP36 ring finger protein 0.02915
ABTB3 ankyrin repeat and BTB domain containing 3 0.0291249
KLF6 Kruppel-like factor 6 0.0284511
AHNAK2 AHNAK nucleoprotein 2 0.0283157
LOXL2 lysyl oxidase-like 2 0.0277338
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0273692
DST dystonin 0.0271261
RB1CC1 RB1-inducible coiled-coil 1 0.0264265
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0262262
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0257794
RAD51B RAD51 paralog B 0.0256612
AHNAK AHNAK nucleoprotein 0.0251262
CMIP c-Maf inducing protein 0.0250252
FLNB filamin B, beta 0.0246339
PCBP2 poly(rC) binding protein 2 0.024613
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.024429
SHB Src homology 2 domain containing adaptor protein B 0.0241828
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0235349
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0233793
LIMCH1 LIM and calponin homology domains 1 0.0230763
OPTN optineurin 0.0230623
MSI2 musashi RNA-binding protein 2 0.0228817
USP47 ubiquitin specific peptidase 47 0.0225438
RHCG Rh family, C glycoprotein 0.022353
ANO6 anoctamin 6 0.0219116
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0215664
FNIP1 folliculin interacting protein 1 0.0211807
TGFBR1 transforming growth factor, beta receptor 1 0.0210328
HMGA2 high mobility group AT-hook 2 0.0207083
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0206081
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0205779
DOCK5 dedicator of cytokinesis 5 0.0202136
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0201546
SP100 SP100 nuclear antigen 0.0197722
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0197277
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0195341
KIF16B kinesin family member 16B 0.0195034
DIAPH2 diaphanous-related formin 2 0.0193695
TBC1D5 TBC1 domain family, member 5 0.0191396
IGFBP4 insulin-like growth factor binding protein 4 0.0189154
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 0.0188742
ZFHX3 zinc finger homeobox 3 0.0188516
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0181755
MCTP1 multiple C2 domains, transmembrane 1 0.0180108
SH3KBP1 SH3-domain kinase binding protein 1 0.0179946
BACE2 beta-site APP-cleaving enzyme 2 0.0179669
FLNA filamin A, alpha 0.0177943
MYO1E myosin IE 0.0176967
LAMB3 laminin, beta 3 0.0176948
PDLIM5 PDZ and LIM domain 5 0.0175558
BNC2 basonuclin 2 0.0175028
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0173919
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0172044
IRAK2 interleukin-1 receptor-associated kinase 2 0.0170897

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.255596
TMSB10 thymosin beta 10 -0.133253
ACTG1 actin gamma 1 -0.130257
FTL ferritin, light polypeptide -0.124544
ASPH aspartate beta-hydroxylase -0.104754
RPS6 ribosomal protein S6 -0.0975855
MT2A metallothionein 2A -0.0934862
RPLP1 ribosomal protein, large, P1 -0.0859269
TXNRD1 thioredoxin reductase 1 -0.0833258
TM4SF1 transmembrane 4 L six family member 1 -0.0820725
RPS19 ribosomal protein S19 -0.0753218
STC1 stanniocalcin 1 -0.0719114
TPT1 tumor protein, translationally-controlled 1 -0.0670692
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0653529
RPS16 ribosomal protein S16 -0.0647003
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.061927
KYNU kynureninase -0.0617571
MYH9 myosin, heavy chain 9, non-muscle -0.061308
PTMA prothymosin, alpha -0.0610822
RPS8 ribosomal protein S8 -0.0579762
RPS2 ribosomal protein S2 -0.0578024
PKM pyruvate kinase, muscle -0.0577525
EIF1 eukaryotic translation initiation factor 1 -0.0572237
NAP1L1 nucleosome assembly protein 1-like 1 -0.0567987
TNIP1 TNFAIP3 interacting protein 1 -0.0566427
RPL26 ribosomal protein L26 -0.0553325
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0547507
RPS27A ribosomal protein S27a -0.0541117
RPL19 ribosomal protein L19 -0.0498707
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0482945
EEF2 eukaryotic translation elongation factor 2 -0.0478486
RPL28 ribosomal protein L28 -0.0477388
RPS13 ribosomal protein S13 -0.0474901
RPS5 ribosomal protein S5 -0.0471191
RPL7A ribosomal protein L7a -0.0459379
RPS24 ribosomal protein S24 -0.0451279
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0446605
PLEC plectin -0.043308
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0425022
GOLGA4 golgin A4 -0.0423582
RPL23 ribosomal protein L23 -0.0423467
RPL31 ribosomal protein L31 -0.0418144
AKR1C2 aldo-keto reductase family 1, member C2 -0.0413005
NAMPT nicotinamide phosphoribosyltransferase -0.0404998
RPL37A ribosomal protein L37a -0.0404352
RPL8 ribosomal protein L8 -0.0402634
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.039926
RPL12 ribosomal protein L12 -0.03806
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0380217
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0377884
TRIO trio Rho guanine nucleotide exchange factor -0.0377509
USP3 ubiquitin specific peptidase 3 -0.0375721
KRT81 keratin 81, type II -0.0374674
RPS23 ribosomal protein S23 -0.0369936
RPS11 ribosomal protein S11 -0.0360535
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0354637
RPL35 ribosomal protein L35 -0.0354184
BIRC6 baculoviral IAP repeat containing 6 -0.0352157
RPLP0 ribosomal protein, large, P0 -0.0344978
S100A10 S100 calcium binding protein A10 -0.0341084
RPS17 ribosomal protein S17 -0.0339671
UBC ubiquitin C -0.0338731
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0335978
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.033369
RPL9 ribosomal protein L9 -0.0330458
RPL36A ribosomal protein L36a -0.032849
LOC112694756 uncharaterized LOC112694756 -0.0324022
MSN moesin -0.0323804
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0320695
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.031592
RPL32 ribosomal protein L32 -0.0313987
NDRG1 N-myc downstream regulated 1 -0.0313586
RPLP2 ribosomal protein, large, P2 -0.0312716
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.031025
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0308709
RPS12 ribosomal protein S12 -0.0307752
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0306298
RPS27 ribosomal protein S27 -0.0305605
SPAG9 sperm associated antigen 9 -0.0303007
RPL3 ribosomal protein L3 -0.0303004
MT1X metallothionein 1X -0.0302096
KCTD9 potassium channel tetramerization domain containing 9 -0.0301892
WDR43 WD repeat domain 43 -0.030073
RPL38 ribosomal protein L38 -0.029818
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0295133
PRRC2C proline-rich coiled-coil 2C -0.0293734
RPS21 ribosomal protein S21 -0.0293716
RPS25 ribosomal protein S25 -0.0293604
RPS29 ribosomal protein S29 -0.0291636
RPL11 ribosomal protein L11 -0.029158
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0288106
WWC1 WW and C2 domain containing 1 -0.0284833
LMNA lamin A/C -0.0281872
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0278775
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0277045
EREG epiregulin -0.0276697
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0276113
MKI67 marker of proliferation Ki-67 -0.0275288
SETD5 SET domain containing 5 -0.027347
ENO1 enolase 1, (alpha) -0.0273194