Larotrectinib sulfate_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PRKG1 protein kinase, cGMP-dependent, type I 0.202468
MGP matrix Gla protein 0.091261
SEPTIN11 septin 11 0.0856327
PRELID2 PRELI domain containing 2 0.0811023
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0803704
GSE1 Gse1 coiled-coil protein 0.0742583
EXOC4 exocyst complex component 4 0.0563059
FNIP1 folliculin interacting protein 1 0.0548791
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0548722
CAMTA1 calmodulin binding transcription activator 1 0.0504196
TMSB4X thymosin beta 4, X-linked 0.047273
RAD51B RAD51 paralog B 0.0460144
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0445085
NUMA1 nuclear mitotic apparatus protein 1 0.0431662
H1-4 H1.4 linker histone, cluster member 0.0422284
KAZN kazrin, periplakin interacting protein 0.0405552
ITGAV integrin, alpha V 0.0402977
QKI QKI, KH domain containing, RNA binding 0.0399114
TNIP1 TNFAIP3 interacting protein 1 0.039754
HOXC6 homeobox C6 0.0397409
ZBTB20 zinc finger and BTB domain containing 20 0.0396631
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0390041
HMGB2 high mobility group box 2 0.0386708
TOP2B topoisomerase (DNA) II beta 180kDa 0.0385889
SQSTM1 sequestosome 1 0.0380644
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0376521
SOX6 SRY (sex determining region Y)-box 6 0.037252
MYH9 myosin, heavy chain 9, non-muscle 0.0355212
SFTPA2 surfactant protein A2 0.0353453
FGFR2 fibroblast growth factor receptor 2 0.0352815
OGA O-GlcNAcase 0.0343044
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0341619
FER fer (fps/fes related) tyrosine kinase 0.0337953
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0337602
UTRN utrophin 0.0336478
VEGFA vascular endothelial growth factor A 0.033459
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.0330594
USP9X ubiquitin specific peptidase 9, X-linked 0.0329798
BCAS3 breast carcinoma amplified sequence 3 0.0328484
OPTN optineurin 0.0324935
HOXA3 homeobox A3 0.0314542
SRRM2 serine/arginine repetitive matrix 2 0.0314226
RPL3 ribosomal protein L3 0.031219
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0311387
PTMA prothymosin, alpha 0.0301994
HSPA8 heat shock 70kDa protein 8 0.029681
CCNG2 cyclin G2 0.0284624
SET SET nuclear proto-oncogene 0.0282831
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.0267667
ATG10 autophagy related 10 0.026745
TTC17 tetratricopeptide repeat domain 17 0.0267406
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0264365
TBC1D5 TBC1 domain family, member 5 0.0263008
RAD50 RAD50 homolog (S. cerevisiae) 0.0259406
NCOR2 nuclear receptor corepressor 2 0.0258135
WWOX WW domain containing oxidoreductase 0.0257776
FAF1 Fas (TNFRSF6) associated factor 1 0.025734
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0257064
CENPF centromere protein F, 350/400kDa 0.0255848
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0253705
ARID1B AT rich interactive domain 1B (SWI1-like) 0.025086
IGF2R insulin-like growth factor 2 receptor 0.0250838
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0249688
CAPRIN1 cell cycle associated protein 1 0.0247988
ZNF292 zinc finger protein 292 0.024776
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0246251
SMAD6 SMAD family member 6 0.0245118
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0243017
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0242756
HSPA4 heat shock 70kDa protein 4 0.0241193
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0239849
PELI1 pellino E3 ubiquitin protein ligase 1 0.0237527
OSBPL10 oxysterol binding protein-like 10 0.0236876
H1-2 H1.2 linker histone, cluster member 0.0235531
PRKD1 protein kinase D1 0.0235153
CDK19 cyclin-dependent kinase 19 0.0233719
DBN1 drebrin 1 0.0232437
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0231482
KLHL24 kelch-like family member 24 0.0228663
SERINC1 serine incorporator 1 0.022707
WWC2 WW and C2 domain containing 2 0.0227005
DNAH14 dynein, axonemal, heavy chain 14 0.0225091
XRN2 5'-3' exoribonuclease 2 0.0224643
FOXC1 forkhead box C1 0.0224605
GIGYF2 GRB10 interacting GYF protein 2 0.022459
DNAAF9 dynein axonemal assembly factor 9 0.0224173
MKRN1 makorin ring finger protein 1 0.0224023
FOXP1 forkhead box P1 0.0222541
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.0222254
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0221838
ATM ATM serine/threonine kinase 0.0219622
SMAP1 small ArfGAP 1 0.0217824
CKAP5 cytoskeleton associated protein 5 0.0217031
PRKN parkin RBR E3 ubiquitin protein ligase 0.0216295
SKIL SKI-like proto-oncogene 0.0213216
AHNAK AHNAK nucleoprotein 0.0212466
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0211052
EIF4B eukaryotic translation initiation factor 4B 0.0209671
ZNF532 zinc finger protein 532 0.0209647
SMC1A structural maintenance of chromosomes 1A 0.0207534

decreased expression

Symbol Name Standardized Value
PEG10 paternally expressed 10 -0.258897
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.191115
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.114419
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.109241
CADM2 cell adhesion molecule 2 -0.109151
PDE4D phosphodiesterase 4D, cAMP-specific -0.101648
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0795247
TPK1 thiamin pyrophosphokinase 1 -0.0723895
HMGA1 high mobility group AT-hook 1 -0.0722037
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0629688
VIM vimentin -0.0615327
PKM pyruvate kinase, muscle -0.0584136
NDRG1 N-myc downstream regulated 1 -0.0580666
EGR1 early growth response 1 -0.0560598
AFF4 AF4/FMR2 family, member 4 -0.0525203
ERBIN erbb2 interacting protein -0.0522579
PDIA3 protein disulfide isomerase family A, member 3 -0.0510862
FBXO11 F-box protein 11 -0.0501034
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0500094
ELOVL5 ELOVL fatty acid elongase 5 -0.049953
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0498066
CTBP2 C-terminal binding protein 2 -0.0493552
RAB7A RAB7A, member RAS oncogene family -0.0481991
ENO1 enolase 1, (alpha) -0.0473614
TSHZ2 teashirt zinc finger homeobox 2 -0.0462505
TMSB10 thymosin beta 10 -0.046143
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0460551
FTL ferritin, light polypeptide -0.045662
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0440409
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0438278
RCOR1 REST corepressor 1 -0.0419847
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0417197
FTH1 ferritin, heavy polypeptide 1 -0.041136
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0404156
MTDH metadherin -0.0403123
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0400773
TOP1 topoisomerase (DNA) I -0.0396764
ANKRD17 ankyrin repeat domain 17 -0.039366
RPLP1 ribosomal protein, large, P1 -0.0393299
SENP6 SUMO1/sentrin specific peptidase 6 -0.0393295
RPS6 ribosomal protein S6 -0.039149
POTEF POTE ankyrin domain family, member F -0.038953
MSRB3 methionine sulfoxide reductase B3 -0.0383493
LDHA lactate dehydrogenase A -0.0382928
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0378077
CSNK1A1 casein kinase 1, alpha 1 -0.0370057
RPL35A ribosomal protein L35a -0.0369559
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0365557
HMGB1 high mobility group box 1 -0.0361074
ACTG1 actin gamma 1 -0.0357531
TIMP2 TIMP metallopeptidase inhibitor 2 -0.035498
NFIB nuclear factor I/B -0.0354846
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0352837
GOLGA4 golgin A4 -0.035181
ADIPOR2 adiponectin receptor 2 -0.0346389
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0336138
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0332047
KMT2C lysine (K)-specific methyltransferase 2C -0.0331191
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0326851
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0323999
SREBF2 sterol regulatory element binding transcription factor 2 -0.0323447
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0321487
MAP1B microtubule-associated protein 1B -0.0321204
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0320195
TXNRD1 thioredoxin reductase 1 -0.0319296
MT2A metallothionein 2A -0.0319191
SIK3 SIK family kinase 3 -0.0319172
GPC6 glypican 6 -0.0317136
KDM5B lysine (K)-specific demethylase 5B -0.0317076
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0314742
RPS23 ribosomal protein S23 -0.0314469
CDK13 cyclin-dependent kinase 13 -0.0313109
TSC22D2 TSC22 domain family, member 2 -0.0309596
RPS8 ribosomal protein S8 -0.030898
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0308802
KDM2A lysine (K)-specific demethylase 2A -0.0305457
GLS2 glutaminase 2 (liver, mitochondrial) -0.0303191
JMJD1C jumonji domain containing 1C -0.0302338
PUM2 pumilio RNA-binding family member 2 -0.0302149
TPM4 tropomyosin 4 -0.030204
RPS25 ribosomal protein S25 -0.0300687
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0299977
AGO3 argonaute RISC catalytic component 3 -0.0299555
RBM25 RNA binding motif protein 25 -0.0298534
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0297637
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 -0.0293508
KDM6A lysine (K)-specific demethylase 6A -0.0291509
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0288145
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0288116
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.0281787
SERBP1 SERPINE1 mRNA binding protein 1 -0.0278654
RPL8 ribosomal protein L8 -0.0277594
SMC5 structural maintenance of chromosomes 5 -0.0277486
NOP58 NOP58 ribonucleoprotein -0.0276891
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0276326
CHD1 chromodomain helicase DNA binding protein 1 -0.0275684
WASL Wiskott-Aldrich syndrome-like -0.0273604
IARS1 isoleucyl-tRNA synthetase 1 -0.027098
RPL28 ribosomal protein L28 -0.0269801
BSG basigin (Ok blood group) -0.0269083