Larotrectinib sulfate_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 0.10743
MYH9 myosin, heavy chain 9, non-muscle 0.0986234
FBXL20 F-box and leucine-rich repeat protein 20 0.0889126
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.084572
VMP1 vacuole membrane protein 1 0.0807036
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0685294
THSD4 thrombospondin, type I, domain containing 4 0.0667379
LIMCH1 LIM and calponin homology domains 1 0.0654037
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0594246
APP amyloid beta (A4) precursor protein 0.0582856
CEP250 centrosomal protein 250kDa 0.0578814
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 0.0559491
LPP LIM domain containing preferred translocation partner in lipoma 0.0534419
TRIO trio Rho guanine nucleotide exchange factor 0.0507844
CTNND1 catenin (cadherin-associated protein), delta 1 0.0503448
SRCIN1 SRC kinase signaling inhibitor 1 0.0494681
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0487278
SMAD3 SMAD family member 3 0.0487036
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.04526
DSPP dentin sialophosphoprotein 0.0448942
ANKRD12 ankyrin repeat domain 12 0.0445141
FBXO32 F-box protein 32 0.0442998
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0427471
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0421064
ANKRD36C ankyrin repeat domain 36C 0.0414407
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0407312
SMYD3 SET and MYND domain containing 3 0.0405132
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0402899
NDRG1 N-myc downstream regulated 1 0.0398521
NAMPT nicotinamide phosphoribosyltransferase 0.0392481
ZFAND3 zinc finger, AN1-type domain 3 0.0387651
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0384873
PABPC1 poly(A) binding protein, cytoplasmic 1 0.038273
PLEC plectin 0.0381706
MSI2 musashi RNA-binding protein 2 0.0380429
ESYT2 extended synaptotagmin-like protein 2 0.036143
KTN1 kinectin 1 (kinesin receptor) 0.0357251
MACF1 microtubule-actin crosslinking factor 1 0.0353676
KIAA1217 KIAA1217 0.0347265
MT2A metallothionein 2A 0.0341924
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0339433
VEGFA vascular endothelial growth factor A 0.0339032
PRRC2C proline-rich coiled-coil 2C 0.0337033
APLP2 amyloid beta (A4) precursor-like protein 2 0.0330474
MLPH melanophilin 0.0328465
ZHX2 zinc fingers and homeoboxes 2 0.0326841
ATXN1 ataxin 1 0.0321477
MYO10 myosin X 0.0321334
SEPTIN9 septin 9 0.0317821
EXT1 exostosin glycosyltransferase 1 0.0317684
JAK1 Janus kinase 1 0.0316417
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0307673
TPD52 tumor protein D52 0.0306833
PAWR PRKC, apoptosis, WT1, regulator 0.0305958
NCOA3 nuclear receptor coactivator 3 0.0304812
YBX3 Y box binding protein 3 0.0304217
KDM7A lysine (K)-specific demethylase 7A 0.0303922
ITGB6 integrin, beta 6 0.0298359
BAIAP2L1 BAI1-associated protein 2-like 1 0.0296906
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0292612
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.029243
RICTOR RPTOR independent companion of MTOR, complex 2 0.0290516
SHB Src homology 2 domain containing adaptor protein B 0.0289682
SAMD12 sterile alpha motif domain containing 12 0.0288173
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0285411
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0284047
NRIP1 nuclear receptor interacting protein 1 0.0280299
SBF2 SET binding factor 2 0.0278386
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0277188
DGKD diacylglycerol kinase, delta 130kDa 0.0276194
SET SET nuclear proto-oncogene 0.0273328
YPEL2 yippee-like 2 (Drosophila) 0.0272555
GRB7 growth factor receptor-bound protein 7 0.027096
HSPA8 heat shock 70kDa protein 8 0.0270664
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0268062
MCL1 myeloid cell leukemia 1 0.0267895
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0266847
AFF1 AF4/FMR2 family, member 1 0.0266182
EGFR epidermal growth factor receptor 0.0265732
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0258197
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0255989
KLHL24 kelch-like family member 24 0.0252081
KIF1A kinesin family member 1A 0.02507
FOXO3 forkhead box O3 0.0248981
NIPBL Nipped-B homolog (Drosophila) 0.0247602
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0247563
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0246883
CEMIP cell migration inducing protein, hyaluronan binding 0.024667
RB1CC1 RB1-inducible coiled-coil 1 0.0246278
MYO6 myosin VI 0.0245818
KMT2C lysine (K)-specific methyltransferase 2C 0.0245314
SOS2 son of sevenless homolog 2 (Drosophila) 0.0244695
DOCK5 dedicator of cytokinesis 5 0.0243904
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.024299
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0242848
SLC22A23 solute carrier family 22, member 23 0.0242136
BCAS3 breast carcinoma amplified sequence 3 0.0241963
ACTN1 actinin, alpha 1 0.0239621
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0239449
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0235331

decreased expression

Symbol Name Standardized Value
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.111996
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0817218
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0667106
RPL23 ribosomal protein L23 -0.0634138
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0590393
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0564652
CATSPERB catsper channel auxiliary subunit beta -0.0508712
ACACA acetyl-CoA carboxylase alpha -0.0460346
ASPH aspartate beta-hydroxylase -0.0360148
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0351793
FASN fatty acid synthase -0.0323996
FTH1 ferritin, heavy polypeptide 1 -0.0317549
TRPS1 trichorhinophalangeal syndrome I -0.0298818
RPL35A ribosomal protein L35a -0.0290064
CCND1 cyclin D1 -0.0287831
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.0279219
POTEF POTE ankyrin domain family, member F -0.0260128
FADS2 fatty acid desaturase 2 -0.0246894
TMSB10 thymosin beta 10 -0.0240133
INTS6 integrator complex subunit 6 -0.0238287
MSMO1 methylsterol monooxygenase 1 -0.0227585
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0220663
FDPS farnesyl diphosphate synthase -0.0210484
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0207083
IGFBP5 insulin-like growth factor binding protein 5 -0.019377
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0188623
INSIG1 insulin induced gene 1 -0.0181243
S100A9 S100 calcium binding protein A9 -0.0179684
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0179598
RPS24 ribosomal protein S24 -0.0178191
TCEA2 transcription elongation factor A (SII), 2 -0.017738
ELOVL5 ELOVL fatty acid elongase 5 -0.0170472
POLD3 polymerase (DNA-directed), delta 3, accessory subunit -0.0169662
TUBA1B tubulin, alpha 1b -0.0168716
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0167712
BPTF bromodomain PHD finger transcription factor -0.0167689
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0156545
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0156294
HMGB1 high mobility group box 1 -0.0155557
STRN3 striatin, calmodulin binding protein 3 -0.015534
TUBB tubulin, beta class I -0.0150947
RIMS2 regulating synaptic membrane exocytosis 2 -0.015075
S100A8 S100 calcium binding protein A8 -0.0147371
RPL34 ribosomal protein L34 -0.0142448
ENAH enabled homolog (Drosophila) -0.0138322
PLSCR2 phospholipid scramblase 2 -0.0136153
RCOR1 REST corepressor 1 -0.0132844
RPL30 ribosomal protein L30 -0.013277
CD24 CD24 molecule -0.0132458
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 -0.0130866
RTN3 reticulon 3 -0.0129539
GPC5 glypican 5 -0.0127974
SQLE squalene epoxidase -0.0127581
RAB10 RAB10, member RAS oncogene family -0.0126788
PDIA3 protein disulfide isomerase family A, member 3 -0.0123946
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0122971
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0120491
RPS20 ribosomal protein S20 -0.0120204
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0118936
NCAM2 neural cell adhesion molecule 2 -0.0117691
TTC6 tetratricopeptide repeat domain 6 -0.0116219
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0115264
IDI1 isopentenyl-diphosphate delta isomerase 1 -0.0113267
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0112635
RHOB ras homolog family member B -0.0111239
TMEM123 transmembrane protein 123 -0.0111113
EGR1 early growth response 1 -0.0110414
RPL27A ribosomal protein L27a -0.0109412
OLA1 Obg-like ATPase 1 -0.0108815
TOB1 transducer of ERBB2, 1 -0.0108812
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.0108775
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 -0.0107983
SAMD4A sterile alpha motif domain containing 4A -0.010782
RPS12 ribosomal protein S12 -0.010632
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -0.0105797
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0104311
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0103269
FOXP2 forkhead box P2 -0.0101966
CDK14 cyclin-dependent kinase 14 -0.0101605
RAB22A RAB22A, member RAS oncogene family -0.01015
MVD mevalonate (diphospho) decarboxylase -0.0101146
TAOK1 TAO kinase 1 -0.0101083
LRP1B low density lipoprotein receptor-related protein 1B -0.0100908
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0100662
TMEM135 transmembrane protein 135 -0.0100411
DNAH14 dynein, axonemal, heavy chain 14 -0.0100393
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0100312
HOMER1 homer scaffolding protein 1 -0.00998904
COX8A cytochrome c oxidase subunit VIIIA (ubiquitous) -0.00997065
FGB fibrinogen beta chain -0.00995392
GRHL1 grainyhead-like 1 (Drosophila) -0.00988179
IFI6 interferon, alpha-inducible protein 6 -0.00977504
ATP5F1B ATP synthase F1 subunit beta -0.00974171
RPLP1 ribosomal protein, large, P1 -0.0097194
RPL12 ribosomal protein L12 -0.0097175
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 -0.00970503
DHCR7 7-dehydrocholesterol reductase -0.00969467
MBD4 methyl-CpG binding domain protein 4 -0.00966995
EIF5B eukaryotic translation initiation factor 5B -0.00958645
VDAC1 voltage-dependent anion channel 1 -0.00955813