Larotrectinib sulfate_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.255526
ESYT2 extended synaptotagmin-like protein 2 0.0676359
BHLHE40 basic helix-loop-helix family, member e40 0.0645799
NAV2 neuron navigator 2 0.0618916
TMEM178B transmembrane protein 178B 0.0549476
CD109 CD109 molecule 0.0486512
IGFBP5 insulin-like growth factor binding protein 5 0.048373
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0448144
MT2A metallothionein 2A 0.0417511
SSBP3 single stranded DNA binding protein 3 0.0415682
AKAP12 A kinase (PRKA) anchor protein 12 0.035613
TPR translocated promoter region, nuclear basket protein 0.0346765
KTN1 kinectin 1 (kinesin receptor) 0.0337386
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0336164
FGF13 fibroblast growth factor 13 0.0333749
ZNF704 zinc finger protein 704 0.0329544
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0303982
NAV1 neuron navigator 1 0.0303693
RNF145 ring finger protein 145 0.0300736
PTK2 protein tyrosine kinase 2 0.029481
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0293795
FBXO7 F-box protein 7 0.0289656
ZFP36 ZFP36 ring finger protein 0.0273816
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0270268
MYO10 myosin X 0.0266296
FOSL1 FOS-like antigen 1 0.0263522
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0263057
FRMD6 FERM domain containing 6 0.0248293
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0243911
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0229685
TSC22D1 TSC22 domain family, member 1 0.022924
TIMP3 TIMP metallopeptidase inhibitor 3 0.022561
CENPF centromere protein F, 350/400kDa 0.0220245
COPA coatomer protein complex, subunit alpha 0.0218958
STXBP1 syntaxin binding protein 1 0.0217112
SRRM2 serine/arginine repetitive matrix 2 0.0216536
APLP2 amyloid beta (A4) precursor-like protein 2 0.0214927
CDK19 cyclin-dependent kinase 19 0.0211352
SETD5 SET domain containing 5 0.0210317
MIDEAS mitotic deacetylase associated SANT domain protein 0.0210121
CAMTA1 calmodulin binding transcription activator 1 0.02101
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0208553
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.020254
AFDN afadin, adherens junction formation factor 0.0199466
ZNF451 zinc finger protein 451 0.0194525
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0190611
PCBP2 poly(rC) binding protein 2 0.018986
VEGFA vascular endothelial growth factor A 0.0189472
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0187501
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0187488
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0183778
TAPBP TAP binding protein (tapasin) 0.0183346
STOM stomatin 0.0182176
NOTCH2 notch 2 0.0180395
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0173564
SMAP1 small ArfGAP 1 0.017257
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0172218
SUCO SUN domain containing ossification factor 0.0172165
BRWD1 bromodomain and WD repeat domain containing 1 0.0170932
TIMP2 TIMP metallopeptidase inhibitor 2 0.0166841
EFR3B EFR3 homolog B (S. cerevisiae) 0.0164093
SRRM1 serine/arginine repetitive matrix 1 0.0163944
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.016389
PRRC2C proline-rich coiled-coil 2C 0.0163068
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.016279
HDGF hepatoma-derived growth factor 0.016021
SPAG9 sperm associated antigen 9 0.0159811
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0159092
LNPK lunapark, ER junction formation factor 0.0158861
CHD1 chromodomain helicase DNA binding protein 1 0.0157451
SCARB1 scavenger receptor class B, member 1 0.0155129
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0154952
UBASH3B ubiquitin associated and SH3 domain containing B 0.0154667
CCDC91 coiled-coil domain containing 91 0.0154435
HILPDA hypoxia inducible lipid droplet-associated 0.0153886
GOLGA4 golgin A4 0.0153373
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0153286
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0152916
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0149532
PTMA prothymosin, alpha 0.0148054
TPD52 tumor protein D52 0.0144714
INSIG2 insulin induced gene 2 0.0144663
RYK receptor-like tyrosine kinase 0.0142626
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0141985
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.014155
TMF1 TATA element modulatory factor 1 0.0140991
RPS12 ribosomal protein S12 0.0140804
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0139328
YAP1 Yes-associated protein 1 0.0138886
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.0138641
CHD1L chromodomain helicase DNA binding protein 1-like 0.0138091
SLC4A2 solute carrier family 4 (anion exchanger), member 2 0.0138038
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0137675
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0137662
ANO6 anoctamin 6 0.0136169
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0135383
FBXO32 F-box protein 32 0.0133822
SEPTIN9 septin 9 0.0133172
FNIP1 folliculin interacting protein 1 0.0131612
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0131075

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.247315
GPC6 glypican 6 -0.213794
VGF VGF nerve growth factor inducible -0.189911
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.155586
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.131347
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.130244
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.122877
IFI16 interferon, gamma-inducible protein 16 -0.0912324
ASPH aspartate beta-hydroxylase -0.0873261
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0830239
NAMPT nicotinamide phosphoribosyltransferase -0.0766151
TMSB10 thymosin beta 10 -0.0729452
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0722589
TNNC1 troponin C type 1 (slow) -0.0714407
OXR1 oxidation resistance 1 -0.0706336
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0703358
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0699989
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0597098
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0587719
NLGN1 neuroligin 1 -0.0586081
WSB1 WD repeat and SOCS box containing 1 -0.0567258
IFRD1 interferon-related developmental regulator 1 -0.0559556
IER3 immediate early response 3 -0.0532581
MACROD2 MACRO domain containing 2 -0.051827
COG5 component of oligomeric golgi complex 5 -0.0515694
S100A6 S100 calcium binding protein A6 -0.0490423
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0487562
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0467548
LOC112694756 uncharaterized LOC112694756 -0.0466854
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0462737
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0454762
FRMD4A FERM domain containing 4A -0.045223
SCFD2 sec1 family domain containing 2 -0.0446924
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0443372
RPLP1 ribosomal protein, large, P1 -0.043087
CALU calumenin -0.0430217
OSMR oncostatin M receptor -0.042954
TAGLN2 transgelin 2 -0.041477
NPAS2 neuronal PAS domain protein 2 -0.0414487
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0409933
UBE2H ubiquitin-conjugating enzyme E2H -0.0399994
RHEB Ras homolog enriched in brain -0.0395386
PCDH7 protocadherin 7 -0.0388988
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.038056
HLA-B major histocompatibility complex, class I, B -0.0379686
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0376888
WWTR1 WW domain containing transcription regulator 1 -0.0373749
FMN1 formin 1 -0.0369505
CALD1 caldesmon 1 -0.0364655
ACTG1 actin gamma 1 -0.0362855
HMCN1 hemicentin 1 -0.0359127
PTPRD protein tyrosine phosphatase, receptor type, D -0.0357363
IGF1R insulin-like growth factor 1 receptor -0.0355597
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0353951
NPC1 Niemann-Pick disease, type C1 -0.0351007
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0346666
DCT dopachrome tautomerase -0.0343455
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.033957
TM4SF1 transmembrane 4 L six family member 1 -0.0339432
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.033919
PDIA4 protein disulfide isomerase family A, member 4 -0.0338097
NPR2 natriuretic peptide receptor 2 -0.033795
NCOA7 nuclear receptor coactivator 7 -0.0331021
SOX5 SRY (sex determining region Y)-box 5 -0.0325273
PKM pyruvate kinase, muscle -0.0324875
ZMYND8 zinc finger, MYND-type containing 8 -0.0322145
ICAM1 intercellular adhesion molecule 1 -0.0320515
ADNP activity-dependent neuroprotector homeobox -0.0320347
FUS FUS RNA binding protein -0.0316674
RTN4 reticulon 4 -0.0311274
VCL vinculin -0.0309277
PAX3 paired box 3 -0.0307278
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0305563
INPP5F inositol polyphosphate-5-phosphatase F -0.0304462
DOCK4 dedicator of cytokinesis 4 -0.0302583
PDIA3 protein disulfide isomerase family A, member 3 -0.0302084
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0300533
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.029924
GNAS GNAS complex locus -0.0296687
CD63 CD63 molecule -0.0291131
CHSY1 chondroitin sulfate synthase 1 -0.0284596
MCTP1 multiple C2 domains, transmembrane 1 -0.028372
CDK14 cyclin-dependent kinase 14 -0.0283096
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0282761
ANKRD28 ankyrin repeat domain 28 -0.028275
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0279356
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0279142
BACE2 beta-site APP-cleaving enzyme 2 -0.0277249
TPT1 tumor protein, translationally-controlled 1 -0.0270878
GSK3B glycogen synthase kinase 3 beta -0.0269087
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0268356
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.026834
PGK1 phosphoglycerate kinase 1 -0.026725
RRBP1 ribosome binding protein 1 -0.0265477
EHBP1 EH domain binding protein 1 -0.0262447
CSNK1A1 casein kinase 1, alpha 1 -0.0256549
MBD5 methyl-CpG binding domain protein 5 -0.0256486
ANXA2 annexin A2 -0.0254131
EXT1 exostosin glycosyltransferase 1 -0.0254008
COL1A2 collagen, type I, alpha 2 -0.0252277