Larotrectinib sulfate_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.16053
SPTBN1 spectrin, beta, non-erythrocytic 1 0.15156
MYH9 myosin, heavy chain 9, non-muscle 0.135701
LAMB3 laminin, beta 3 0.118006
SMAD3 SMAD family member 3 0.11111
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0976807
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0932506
APLP2 amyloid beta (A4) precursor-like protein 2 0.0855261
BACE2 beta-site APP-cleaving enzyme 2 0.0834679
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0818256
APP amyloid beta (A4) precursor protein 0.0714364
EZR ezrin 0.068664
MACF1 microtubule-actin crosslinking factor 1 0.0638961
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0590405
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0578039
FLNA filamin A, alpha 0.0559923
FLNB filamin B, beta 0.0543943
SAMD4A sterile alpha motif domain containing 4A 0.0539167
ERRFI1 ERBB receptor feedback inhibitor 1 0.0491111
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0481963
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0480323
AHNAK2 AHNAK nucleoprotein 2 0.0480306
KLF6 Kruppel-like factor 6 0.0465255
TSC22D2 TSC22 domain family, member 2 0.0463663
AKAP13 A kinase (PRKA) anchor protein 13 0.0461551
CCNY cyclin Y 0.046043
VEGFA vascular endothelial growth factor A 0.0448623
VIM vimentin 0.0414536
PPARD peroxisome proliferator-activated receptor delta 0.0409918
ADAM9 ADAM metallopeptidase domain 9 0.040424
TNIP1 TNFAIP3 interacting protein 1 0.0402924
DSPP dentin sialophosphoprotein 0.0396765
TRIO trio Rho guanine nucleotide exchange factor 0.0386794
ANKRD11 ankyrin repeat domain 11 0.0381958
TGM2 transglutaminase 2 0.0376564
FAM13A family with sequence similarity 13, member A 0.0368729
OPTN optineurin 0.0364951
HSPA8 heat shock 70kDa protein 8 0.0360607
RIOK3 RIO kinase 3 0.0360302
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.035034
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0348535
ANXA11 annexin A11 0.0347868
DIAPH1 diaphanous-related formin 1 0.034328
PADI1 peptidyl arginine deiminase, type I 0.0337651
RAB8B RAB8B, member RAS oncogene family 0.0321655
MCL1 myeloid cell leukemia 1 0.0320314
PLEC plectin 0.031954
OGA O-GlcNAcase 0.0316198
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0316188
ACTN4 actinin, alpha 4 0.0315238
FNBP1L formin binding protein 1-like 0.0314521
MYOF myoferlin 0.0311747
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.031122
AHNAK AHNAK nucleoprotein 0.0308722
ARRDC3 arrestin domain containing 3 0.0307631
NAV2 neuron navigator 2 0.0305979
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0299215
BCAR3 breast cancer anti-estrogen resistance 3 0.0296041
KTN1 kinectin 1 (kinesin receptor) 0.0293048
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0289333
CASC3 cancer susceptibility candidate 3 0.0286506
FOSL1 FOS-like antigen 1 0.027757
CDCP1 CUB domain containing protein 1 0.0276981
HDAC9 histone deacetylase 9 0.0274894
HPCAL1 hippocalcin-like 1 0.0272811
HOOK2 hook microtubule-tethering protein 2 0.0272686
THSD4 thrombospondin, type I, domain containing 4 0.0268508
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0267254
NFE2L1 nuclear factor, erythroid 2-like 1 0.0265756
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0265282
CTNND1 catenin (cadherin-associated protein), delta 1 0.0263743
FMNL2 formin-like 2 0.0262925
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0262258
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0260921
BRD2 bromodomain containing 2 0.0260436
YTHDC1 YTH domain containing 1 0.0259603
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0259191
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0252054
ELL2 elongation factor, RNA polymerase II, 2 0.0251085
MYO5B myosin VB 0.0250763
SEPTIN9 septin 9 0.0247196
PCBP2 poly(rC) binding protein 2 0.0245297
CCNL1 cyclin L1 0.024524
KDM3A lysine (K)-specific demethylase 3A 0.0242914
CIB1 calcium and integrin binding 1 (calmyrin) 0.024056
IRF6 interferon regulatory factor 6 0.0239183
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0238865
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 0.0237953
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0237731
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0237374
RAI14 retinoic acid induced 14 0.0237342
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0236867
NAMPT nicotinamide phosphoribosyltransferase 0.0235372
CEP250 centrosomal protein 250kDa 0.0235367
LAMB1 laminin, beta 1 0.023492
EIF4B eukaryotic translation initiation factor 4B 0.0234128
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.023184
NALF1 NALCN channel auxiliary factor 1 0.022917
PROSER2 proline and serine rich 2 0.0225762
UBA6 ubiquitin-like modifier activating enzyme 6 0.0225642

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.294347
TMSB10 thymosin beta 10 -0.195018
IGFBP3 insulin-like growth factor binding protein 3 -0.117477
MMP7 matrix metallopeptidase 7 -0.117153
HLA-B major histocompatibility complex, class I, B -0.105841
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0959573
PTMA prothymosin, alpha -0.0845772
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0787959
TPT1 tumor protein, translationally-controlled 1 -0.0770569
CP ceruloplasmin (ferroxidase) -0.0727577
S100A6 S100 calcium binding protein A6 -0.0720871
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0711357
MT1X metallothionein 1X -0.0622971
MT2A metallothionein 2A -0.0611832
ANXA2 annexin A2 -0.0609128
LOC112694756 uncharaterized LOC112694756 -0.0604583
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0576246
EFNA5 ephrin-A5 -0.0561335
RPLP1 ribosomal protein, large, P1 -0.0553239
PDIA3 protein disulfide isomerase family A, member 3 -0.0552805
RPL35A ribosomal protein L35a -0.0550285
EIF1 eukaryotic translation initiation factor 1 -0.0535336
FTL ferritin, light polypeptide -0.0534511
TM4SF1 transmembrane 4 L six family member 1 -0.0527617
IFI27 interferon, alpha-inducible protein 27 -0.0520073
B2M beta-2-microglobulin -0.048699
S100A10 S100 calcium binding protein A10 -0.0468724
IER3 immediate early response 3 -0.0453301
BLZF1 basic leucine zipper nuclear factor 1 -0.0448879
OSMR oncostatin M receptor -0.0435242
ACTG1 actin gamma 1 -0.043203
SLC38A1 solute carrier family 38, member 1 -0.0409756
HLA-A major histocompatibility complex, class I, A -0.0404801
ASPH aspartate beta-hydroxylase -0.0396188
EGR1 early growth response 1 -0.0392822
LCN2 lipocalin 2 -0.0392387
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0389913
EXT1 exostosin glycosyltransferase 1 -0.0387669
F3 coagulation factor III (thromboplastin, tissue factor) -0.0381484
ENO1 enolase 1, (alpha) -0.036904
LMO7 LIM domain 7 -0.0368563
RPL34 ribosomal protein L34 -0.0368493
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0350909
GNAS GNAS complex locus -0.0349015
FBXO11 F-box protein 11 -0.0347174
ISG15 ISG15 ubiquitin-like modifier -0.0341419
RPS24 ribosomal protein S24 -0.0333192
LOC102724023 ES1 protein homolog, mitochondrial -0.0333107
PKM pyruvate kinase, muscle -0.0332407
MYO1E myosin IE -0.0326587
CSTB cystatin B (stefin B) -0.0324551
FTH1 ferritin, heavy polypeptide 1 -0.0314136
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0313879
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0311768
ARF1 ADP-ribosylation factor 1 -0.030748
RAB7A RAB7A, member RAS oncogene family -0.0303547
LY6E lymphocyte antigen 6 complex, locus E -0.0296188
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0294803
SGMS2 sphingomyelin synthase 2 -0.0293717
MRPS6 mitochondrial ribosomal protein S6 -0.0283026
TTC3 tetratricopeptide repeat domain 3 -0.0278284
PLAT plasminogen activator, tissue -0.0278227
RPLP0 ribosomal protein, large, P0 -0.0275696
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0274797
SEC31A SEC31 homolog A (S. cerevisiae) -0.0271982
TXNIP thioredoxin interacting protein -0.0271825
H1-0 H1.0 linker histone -0.0270851
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0270052
TAGLN2 transgelin 2 -0.0268443
STRN3 striatin, calmodulin binding protein 3 -0.0267753
RRBP1 ribosome binding protein 1 -0.0267165
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0266908
ITGA6 integrin, alpha 6 -0.0266559
RPS29 ribosomal protein S29 -0.0265935
RPS8 ribosomal protein S8 -0.0265333
RPS21 ribosomal protein S21 -0.0264305
VDAC1 voltage-dependent anion channel 1 -0.0263704
PDE4D phosphodiesterase 4D, cAMP-specific -0.0262062
EHBP1 EH domain binding protein 1 -0.02596
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0257557
CD2AP CD2-associated protein -0.0255349
UGDH UDP-glucose 6-dehydrogenase -0.0254204
LAMA4 laminin, alpha 4 -0.025314
LMAN1 lectin, mannose-binding, 1 -0.0252141
KRT19 keratin 19, type I -0.0250556
TMEM123 transmembrane protein 123 -0.0250254
RAB1A RAB1A, member RAS oncogene family -0.0249759
ANKHD1 ankyrin repeat and KH domain containing 1 -0.024855
POTEF POTE ankyrin domain family, member F -0.0248326
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0247543
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0245798
HMGA1 high mobility group AT-hook 1 -0.0245571
NRP1 neuropilin 1 -0.0245395
MORF4L2 mortality factor 4 like 2 -0.0241307
IFITM1 interferon induced transmembrane protein 1 -0.0240932
CNRIP1 cannabinoid receptor interacting protein 1 -0.0240192
RPL8 ribosomal protein L8 -0.0238075
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0238024
RPS19 ribosomal protein S19 -0.0237211
RPS6 ribosomal protein S6 -0.0236085