Larotrectinib sulfate_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAM13A family with sequence similarity 13, member A 0.109634
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.104585
CDH10 cadherin 10, type 2 (T2-cadherin) 0.072304
MEIS2 Meis homeobox 2 0.0656755
LSAMP limbic system-associated membrane protein 0.0595134
HELZ helicase with zinc finger 0.0582577
VMP1 vacuole membrane protein 1 0.0577055
UBA6 ubiquitin-like modifier activating enzyme 6 0.0500218
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0495077
FNBP1 formin binding protein 1 0.0486906
GOLGA4 golgin A4 0.0469651
ERRFI1 ERBB receptor feedback inhibitor 1 0.0468739
RUNX1 runt-related transcription factor 1 0.0428106
PCBP2 poly(rC) binding protein 2 0.0417372
NAMPT nicotinamide phosphoribosyltransferase 0.0416383
MEF2A myocyte enhancer factor 2A 0.0381738
NDRG1 N-myc downstream regulated 1 0.0367814
CD36 CD36 molecule (thrombospondin receptor) 0.0366638
ZNF148 zinc finger protein 148 0.0357428
LIMCH1 LIM and calponin homology domains 1 0.0337127
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0335808
ZNF292 zinc finger protein 292 0.031322
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.029948
DNMBP dynamin binding protein 0.0295695
AKAP12 A kinase (PRKA) anchor protein 12 0.0292498
ZFC3H1 zinc finger, C3H1-type containing 0.0289012
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.02885
ANKRD12 ankyrin repeat domain 12 0.0286242
RNF145 ring finger protein 145 0.0285885
SNX13 sorting nexin 13 0.0280527
SCAF11 SR-related CTD-associated factor 11 0.0271411
KTN1 kinectin 1 (kinesin receptor) 0.0270533
DSCAM Down syndrome cell adhesion molecule 0.0268952
RNMT RNA (guanine-7-) methyltransferase 0.0268652
NPEPPS aminopeptidase puromycin sensitive 0.0261077
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0253942
MBD5 methyl-CpG binding domain protein 5 0.0253097
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0252731
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0251995
KMT2C lysine (K)-specific methyltransferase 2C 0.0239789
SMAD4 SMAD family member 4 0.0233277
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0223377
WDR45B WD repeat domain 45B 0.0223271
MXI1 MAX interactor 1, dimerization protein 0.0223237
TAPBP TAP binding protein (tapasin) 0.022079
RB1CC1 RB1-inducible coiled-coil 1 0.0217753
TENT5A terminal nucleotidyltransferase 5A 0.0217401
BCLAF1 BCL2-associated transcription factor 1 0.0217035
PHIP pleckstrin homology domain interacting protein 0.0208517
CD46 CD46 molecule, complement regulatory protein 0.0208434
TTC3 tetratricopeptide repeat domain 3 0.0206599
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0204225
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 0.0203278
ZFP36 ZFP36 ring finger protein 0.0202801
FAM219A family with sequence similarity 219, member A 0.0202666
SSBP3 single stranded DNA binding protein 3 0.0201552
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0201494
TMEM263 transmembrane protein 263 0.0201494
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.020138
SUCO SUN domain containing ossification factor 0.0201068
FLNB filamin B, beta 0.0200711
ANKRD50 ankyrin repeat domain 50 0.0197936
GCC2 GRIP and coiled-coil domain containing 2 0.0197895
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0197154
FER fer (fps/fes related) tyrosine kinase 0.019454
GIGYF2 GRB10 interacting GYF protein 2 0.0193542
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0192895
NSD3 nuclear receptor binding SET domain protein 3 0.0192706
ANO6 anoctamin 6 0.0191164
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0191126
AKAP9 A kinase (PRKA) anchor protein 9 0.0189398
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0188065
EIF4A2 eukaryotic translation initiation factor 4A2 0.0188019
U2SURP U2 snRNP-associated SURP domain containing 0.0187625
NIPBL Nipped-B homolog (Drosophila) 0.0186382
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0185658
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0185249
PELI1 pellino E3 ubiquitin protein ligase 1 0.0184665
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0184252
KLHL13 kelch-like family member 13 0.0183587
JMJD1C jumonji domain containing 1C 0.0182261
TPR translocated promoter region, nuclear basket protein 0.0181806
PMP22 peripheral myelin protein 22 0.0181163
ESYT2 extended synaptotagmin-like protein 2 0.018078
TM9SF3 transmembrane 9 superfamily member 3 0.0180026
TMF1 TATA element modulatory factor 1 0.0177595
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0174426
GYS1 glycogen synthase 1 (muscle) 0.0172692
BIRC2 baculoviral IAP repeat containing 2 0.0172642
KDM6A lysine (K)-specific demethylase 6A 0.0172144
RBM5 RNA binding motif protein 5 0.0172047
DTNA dystrobrevin, alpha 0.0171817
B2M beta-2-microglobulin 0.0170016
C6ORF62 chromosome 6 open reading frame 62 0.016755
CEP290 centrosomal protein 290kDa 0.0167217
PTAR1 protein prenyltransferase alpha subunit repeat containing 1 0.0166546
KMT2E lysine (K)-specific methyltransferase 2E 0.0166303
EEA1 early endosome antigen 1 0.016615
OPTN optineurin 0.0164927
ARPP19 cAMP-regulated phosphoprotein, 19kDa 0.016333

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.346532
NRG1 neuregulin 1 -0.197809
IGF2 insulin-like growth factor 2 -0.190151
VIM vimentin -0.150447
PTMA prothymosin, alpha -0.117312
EXT1 exostosin glycosyltransferase 1 -0.110849
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0991112
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0781517
CEMIP cell migration inducing protein, hyaluronan binding -0.0681671
BICD1 bicaudal D homolog 1 (Drosophila) -0.0680354
SYT1 synaptotagmin I -0.0676811
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0675998
COL1A1 collagen, type I, alpha 1 -0.0638573
PRKCA protein kinase C, alpha -0.0615562
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0586991
RPL23 ribosomal protein L23 -0.0584775
TRIB2 tribbles pseudokinase 2 -0.0573714
COL3A1 collagen, type III, alpha 1 -0.0573487
THSD4 thrombospondin, type I, domain containing 4 -0.0554444
ACTG1 actin gamma 1 -0.0541322
TPT1 tumor protein, translationally-controlled 1 -0.0506412
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0504098
CADM2 cell adhesion molecule 2 -0.0501252
RPS24 ribosomal protein S24 -0.0499948
VCL vinculin -0.0478652
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0470003
CUX1 cut-like homeobox 1 -0.0465938
SLIT2 slit homolog 2 (Drosophila) -0.0459811
EEF2 eukaryotic translation elongation factor 2 -0.0450921
TCF12 transcription factor 12 -0.0442446
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0438141
MSI2 musashi RNA-binding protein 2 -0.0423546
PLCB4 phospholipase C, beta 4 -0.0419435
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0409295
ENAH enabled homolog (Drosophila) -0.0408071
ZNF804A zinc finger protein 804A -0.0391774
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0388397
COL4A5 collagen, type IV, alpha 5 -0.0388395
MYH9 myosin, heavy chain 9, non-muscle -0.0385056
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0383085
PTPRD protein tyrosine phosphatase, receptor type, D -0.0382296
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.038005
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0378194
IGFBP5 insulin-like growth factor binding protein 5 -0.037666
NPAS2 neuronal PAS domain protein 2 -0.0373934
BCAS3 breast carcinoma amplified sequence 3 -0.0367501
PTPRK protein tyrosine phosphatase, receptor type, K -0.0366905
CRH corticotropin releasing hormone -0.0364972
NREP neuronal regeneration related protein -0.0356516
IGFBP3 insulin-like growth factor binding protein 3 -0.0339965
KCNIP4 Kv channel interacting protein 4 -0.0330778
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0330258
SLC38A2 solute carrier family 38, member 2 -0.0326988
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.032529
FOXK2 forkhead box K2 -0.0323392
FKBP10 FK506 binding protein 10, 65 kDa -0.0323256
RPL19 ribosomal protein L19 -0.0320804
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0317952
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0314597
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0312612
COL4A2 collagen, type IV, alpha 2 -0.0312259
GREM2 gremlin 2, DAN family BMP antagonist -0.0302078
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0298133
DKK2 dickkopf WNT signaling pathway inhibitor 2 -0.029694
ATRNL1 attractin-like 1 -0.0294924
TPM4 tropomyosin 4 -0.0294803
RPLP1 ribosomal protein, large, P1 -0.0290708
DNAH14 dynein, axonemal, heavy chain 14 -0.0286175
RGS5 regulator of G-protein signaling 5 -0.0284626
UNC5C unc-5 homolog C (C. elegans) -0.0282931
PEAK1 pseudopodium-enriched atypical kinase 1 -0.0280519
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0279943
ITGA1 integrin, alpha 1 -0.0277191
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0276745
PCDH9 protocadherin 9 -0.0272906
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0272084
LMNA lamin A/C -0.0271408
NRP1 neuropilin 1 -0.0270212
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0270192
PKM pyruvate kinase, muscle -0.0267679
MCL1 myeloid cell leukemia 1 -0.026507
LPP LIM domain containing preferred translocation partner in lipoma -0.0262555
PRKCE protein kinase C, epsilon -0.0258083
CADM1 cell adhesion molecule 1 -0.0257696
PBX1 pre-B-cell leukemia homeobox 1 -0.0253646
RPS23 ribosomal protein S23 -0.0252931
RPL38 ribosomal protein L38 -0.0252705
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0252618
RPS4X ribosomal protein S4, X-linked -0.0252546
CANX calnexin -0.0251352
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0250924
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0250126
SOX4 SRY (sex determining region Y)-box 4 -0.0246836
RPL37 ribosomal protein L37 -0.024661
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0246159
HMGA2 high mobility group AT-hook 2 -0.0245388
PRRC2B proline-rich coiled-coil 2B -0.0245139
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0242455
LARP1 La ribonucleoprotein domain family, member 1 -0.0242114
GLCCI1 glucocorticoid induced 1 -0.0240554