Larotrectinib sulfate_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MLPH melanophilin 0.0560474
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0406425
PHF3 PHD finger protein 3 0.040161
FNIP1 folliculin interacting protein 1 0.0341994
ASPH aspartate beta-hydroxylase 0.0332156
RNF149 ring finger protein 149 0.0325366
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0323563
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0321841
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.03218
ARRDC3 arrestin domain containing 3 0.0306271
PTBP3 polypyrimidine tract binding protein 3 0.029943
RAD51B RAD51 paralog B 0.0297744
ARGLU1 arginine and glutamate rich 1 0.0296805
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0286726
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0283668
ZNF395 zinc finger protein 395 0.0280982
VEGFA vascular endothelial growth factor A 0.0278196
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0277267
NDRG1 N-myc downstream regulated 1 0.0275409
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0267123
ERRFI1 ERBB receptor feedback inhibitor 1 0.0264071
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0263343
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0258428
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.025717
FNDC3B fibronectin type III domain containing 3B 0.0251546
ZBTB20 zinc finger and BTB domain containing 20 0.0246221
BACE2 beta-site APP-cleaving enzyme 2 0.024619
CANX calnexin 0.0243739
KIF16B kinesin family member 16B 0.0243317
N4BP2L2 NEDD4 binding protein 2-like 2 0.0240225
BCLAF1 BCL2-associated transcription factor 1 0.023819
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0237772
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0237741
SRRM2 serine/arginine repetitive matrix 2 0.0236858
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0234608
KMT2E lysine (K)-specific methyltransferase 2E 0.0233074
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0232629
ZNF638 zinc finger protein 638 0.0227668
PCBP2 poly(rC) binding protein 2 0.0222831
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0222256
DSCAM Down syndrome cell adhesion molecule 0.0220711
SAMD4A sterile alpha motif domain containing 4A 0.0219682
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.021498
BHLHE40 basic helix-loop-helix family, member e40 0.021486
TMC5 transmembrane channel-like 5 0.0209642
DST dystonin 0.0207962
ESYT2 extended synaptotagmin-like protein 2 0.0207367
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0197466
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0196695
RAD23B RAD23 homolog B (S. cerevisiae) 0.0195577
SRRM1 serine/arginine repetitive matrix 1 0.0193402
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0193114
DSPP dentin sialophosphoprotein 0.0191319
KTN1 kinectin 1 (kinesin receptor) 0.0190989
ALPK1 alpha-kinase 1 0.0190749
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0187926
OARD1 O-acyl-ADP-ribose deacylase 1 0.018609
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0185853
MYO10 myosin X 0.0184851
RPL7 ribosomal protein L7 0.0183376
ZMYND8 zinc finger, MYND-type containing 8 0.0181611
TSC22D1 TSC22 domain family, member 1 0.0180763
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0179923
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0176958
MYH9 myosin, heavy chain 9, non-muscle 0.0173729
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0173325
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0172069
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0171796
MXI1 MAX interactor 1, dimerization protein 0.017109
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0169797
KLHL24 kelch-like family member 24 0.0169226
SCAPER S-phase cyclin A-associated protein in the ER 0.0168199
DENND4C DENN/MADD domain containing 4C 0.0167836
RSRC2 arginine/serine-rich coiled-coil 2 0.016632
PDZD8 PDZ domain containing 8 0.0165599
NFE2L1 nuclear factor, erythroid 2-like 1 0.016177
IFNGR1 interferon gamma receptor 1 0.0161493
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0161309
FOSL2 FOS-like antigen 2 0.016063
MTUS1 microtubule associated tumor suppressor 1 0.0159946
PGK1 phosphoglycerate kinase 1 0.0159049
SKAP2 src kinase associated phosphoprotein 2 0.0158638
GALK2 galactokinase 2 0.0158264
PADI1 peptidyl arginine deiminase, type I 0.015742
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.015538
PFKP phosphofructokinase, platelet 0.0154903
RPS3 ribosomal protein S3 0.0154178
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0152368
SKIC3 SKI3 subunit of superkiller complex 0.0151244
TAPBP TAP binding protein (tapasin) 0.0151238
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0148744
SCARB1 scavenger receptor class B, member 1 0.0147724
FNDC3A fibronectin type III domain containing 3A 0.0145777
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0144887
NCOR2 nuclear receptor corepressor 2 0.0144658
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0144286
SMAD3 SMAD family member 3 0.01431
NPEPPS aminopeptidase puromycin sensitive 0.0142056
TRIO trio Rho guanine nucleotide exchange factor 0.0141653
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0139902

decreased expression

Symbol Name Standardized Value
STAT1 signal transducer and activator of transcription 1, 91kDa -0.122158
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.104298
LCN2 lipocalin 2 -0.102048
GMDS GDP-mannose 4,6-dehydratase -0.0984527
TPT1 tumor protein, translationally-controlled 1 -0.0900344
ANXA2 annexin A2 -0.0874677
HLA-B major histocompatibility complex, class I, B -0.0825131
RIGI RNA sensor RIG-I -0.0776415
ARHGAP26 Rho GTPase activating protein 26 -0.0770356
EPSTI1 epithelial stromal interaction 1 (breast) -0.0762009
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0742448
LMO7 LIM domain 7 -0.0718671
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0697596
EXT1 exostosin glycosyltransferase 1 -0.0689784
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0657351
MX1 MX dynamin-like GTPase 1 -0.0629273
SQSTM1 sequestosome 1 -0.0616373
SP100 SP100 nuclear antigen -0.0597689
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0587326
RRBP1 ribosome binding protein 1 -0.0580022
LYZ lysozyme -0.0563331
INTS6 integrator complex subunit 6 -0.0541965
EGR1 early growth response 1 -0.054156
ANKRD10 ankyrin repeat domain 10 -0.0511682
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0506727
NPSR1 neuropeptide S receptor 1 -0.0501713
RNF213 ring finger protein 213 -0.0495056
IRF1 interferon regulatory factor 1 -0.0473522
EPHB2 EPH receptor B2 -0.0472783
MACC1 metastasis associated in colon cancer 1 -0.0452432
XAF1 XIAP associated factor 1 -0.0448097
ITGA6 integrin, alpha 6 -0.0426863
MX2 MX dynamin-like GTPase 2 -0.0425554
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0424981
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.042024
HLA-C major histocompatibility complex, class I, C -0.0406658
RAB7A RAB7A, member RAS oncogene family -0.0397162
RABGAP1L RAB GTPase activating protein 1-like -0.03922
IFI6 interferon, alpha-inducible protein 6 -0.0387789
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0372533
C6ORF132 chromosome 6 open reading frame 132 -0.0370633
PLSCR1 phospholipid scramblase 1 -0.0363996
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0361334
LOC112694756 uncharaterized LOC112694756 -0.0359631
NCOA7 nuclear receptor coactivator 7 -0.035698
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0356326
TJP1 tight junction protein 1 -0.0355585
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0355557
MYO1E myosin IE -0.0345476
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0341944
PMP22 peripheral myelin protein 22 -0.0337124
PERP PERP, TP53 apoptosis effector -0.0334942
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0334724
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0331881
VCL vinculin -0.0326594
GCLC glutamate-cysteine ligase, catalytic subunit -0.0325269
ACTG1 actin gamma 1 -0.0323029
PTMA prothymosin, alpha -0.0319831
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0316712
HM13 histocompatibility (minor) 13 -0.0316405
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0314715
TMSB10 thymosin beta 10 -0.0309156
NF1 neurofibromin 1 -0.0306247
EPS8 epidermal growth factor receptor pathway substrate 8 -0.030275
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.029873
MAP7 microtubule-associated protein 7 -0.0297238
ZNFX1 zinc finger, NFX1-type containing 1 -0.0296591
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0295366
IFIH1 interferon induced with helicase C domain 1 -0.0294628
MUC13 mucin 13, cell surface associated -0.0281216
ARF1 ADP-ribosylation factor 1 -0.0280522
NT5C2 5'-nucleotidase, cytosolic II -0.0279812
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0278375
ERBIN erbb2 interacting protein -0.027732
LAP3 leucine aminopeptidase 3 -0.0277256
PATJ PATJ crumbs cell polarity complex component -0.0277226
BTBD9 BTB (POZ) domain containing 9 -0.0274485
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0271984
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0267222
PDIA3 protein disulfide isomerase family A, member 3 -0.0265056
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0259092
HMGB1 high mobility group box 1 -0.025809
ABLIM1 actin binding LIM protein 1 -0.0256936
ARHGAP5 Rho GTPase activating protein 5 -0.0256341
PRKCA protein kinase C, alpha -0.0252387
TRERF1 transcriptional regulating factor 1 -0.0252286
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0251074
TFRC transferrin receptor -0.0249017
SDC4 syndecan 4 -0.0247825
TM4SF1 transmembrane 4 L six family member 1 -0.024589
S100A10 S100 calcium binding protein A10 -0.0242478
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0240387
MECOM MDS1 and EVI1 complex locus -0.0238203
STAU1 staufen double-stranded RNA binding protein 1 -0.0237814
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0237048
EFNB2 ephrin-B2 -0.0236147
VDAC1 voltage-dependent anion channel 1 -0.0233303
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.023037
RUNX1 runt-related transcription factor 1 -0.0228263
S100A6 S100 calcium binding protein A6 -0.0227837