Larotrectinib sulfate_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.113297
EZR ezrin 0.109803
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.103181
BCL2L1 BCL2-like 1 0.0954418
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.093968
STK24 serine/threonine kinase 24 0.0888862
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0668882
DST dystonin 0.0645914
TXNRD1 thioredoxin reductase 1 0.0625512
NECTIN2 nectin cell adhesion molecule 2 0.0606721
GOLGA4 golgin A4 0.0600219
ACTN4 actinin, alpha 4 0.0577862
MSN moesin 0.0569379
FOXO1 forkhead box O1 0.0560368
FAT1 FAT atypical cadherin 1 0.05457
AHNAK AHNAK nucleoprotein 0.0532547
GOLGB1 golgin B1 0.0525974
LATS2 large tumor suppressor kinase 2 0.0525969
PICALM phosphatidylinositol binding clathrin assembly protein 0.0520866
HSPA8 heat shock 70kDa protein 8 0.0508673
AKAP9 A kinase (PRKA) anchor protein 9 0.0507047
PLK2 polo-like kinase 2 0.0505626
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0502967
RHPN2 rhophilin, Rho GTPase binding protein 2 0.0499643
ZFP36 ZFP36 ring finger protein 0.0477888
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0472388
WWC1 WW and C2 domain containing 1 0.0470834
PLAUR plasminogen activator, urokinase receptor 0.0460575
AKAP13 A kinase (PRKA) anchor protein 13 0.0453283
ANXA11 annexin A11 0.0440978
TNS4 tensin 4 0.0440427
ARHGAP29 Rho GTPase activating protein 29 0.043794
SUCO SUN domain containing ossification factor 0.0425701
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0417742
MYH9 myosin, heavy chain 9, non-muscle 0.0415843
RTN4 reticulon 4 0.0404273
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0401309
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0400425
LAMB3 laminin, beta 3 0.039747
TMC5 transmembrane channel-like 5 0.0395072
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0394548
AFDN afadin, adherens junction formation factor 0.0378021
PDIA4 protein disulfide isomerase family A, member 4 0.0375657
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0372849
RB1CC1 RB1-inducible coiled-coil 1 0.0370295
GCLC glutamate-cysteine ligase, catalytic subunit 0.0366317
CTTNBP2NL CTTNBP2 N-terminal like 0.0361345
NCKAP1 NCK-associated protein 1 0.0359175
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0356512
MYO6 myosin VI 0.0353901
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0350342
MACF1 microtubule-actin crosslinking factor 1 0.0350321
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0347482
PDIA6 protein disulfide isomerase family A, member 6 0.0347303
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0346085
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0339589
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0338031
ITGA6 integrin, alpha 6 0.0337542
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 0.0336487
VMP1 vacuole membrane protein 1 0.0330408
FLNB filamin B, beta 0.0329737
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0329706
HYOU1 hypoxia up-regulated 1 0.0323713
C6ORF132 chromosome 6 open reading frame 132 0.0322256
TRIP12 thyroid hormone receptor interactor 12 0.0319641
NEK7 NIMA-related kinase 7 0.0316978
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0316143
EFR3A EFR3 homolog A (S. cerevisiae) 0.0315628
FAM91A1 family with sequence similarity 91, member A1 0.0315582
NIBAN2 niban apoptosis regulator 2 0.0310716
PDZD8 PDZ domain containing 8 0.030973
NAMPT nicotinamide phosphoribosyltransferase 0.0308851
CANX calnexin 0.030874
TAPBP TAP binding protein (tapasin) 0.0307983
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.030784
KIAA0232 KIAA0232 0.0306456
TPM3 tropomyosin 3 0.030275
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0300941
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0297686
UTRN utrophin 0.0296969
WASL Wiskott-Aldrich syndrome-like 0.0294797
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0294575
TMF1 TATA element modulatory factor 1 0.0291724
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0289345
CLIC5 chloride intracellular channel 5 0.0289065
SEC63 SEC63 homolog (S. cerevisiae) 0.0282689
ITGB4 integrin, beta 4 0.0277634
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0276965
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0276853
BLTP1 bridge-like lipid transfer protein family member 1 0.0274954
LPCAT2 lysophosphatidylcholine acyltransferase 2 0.0272766
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 0.027162
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0269309
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.0269003
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0268471
ATXN1 ataxin 1 0.0268302
EIF4A2 eukaryotic translation initiation factor 4A2 0.0267804
ADAM17 ADAM metallopeptidase domain 17 0.0267345
SMAD3 SMAD family member 3 0.0267191
ZFAND5 zinc finger, AN1-type domain 5 0.0266955

decreased expression

Symbol Name Standardized Value
MYH14 myosin, heavy chain 14, non-muscle -0.179852
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.156575
TPT1 tumor protein, translationally-controlled 1 -0.150531
FTL ferritin, light polypeptide -0.123323
INTS6 integrator complex subunit 6 -0.11972
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0992547
KRT20 keratin 20, type I -0.0845409
TMSB10 thymosin beta 10 -0.0820756
LYZ lysozyme -0.0774706
RPLP1 ribosomal protein, large, P1 -0.0769015
PKM pyruvate kinase, muscle -0.0751484
NDRG1 N-myc downstream regulated 1 -0.0723585
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.072174
RPL23 ribosomal protein L23 -0.0691738
EGR1 early growth response 1 -0.0652186
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0651565
PTMA prothymosin, alpha -0.0617654
POF1B premature ovarian failure, 1B -0.0615216
TMEM65 transmembrane protein 65 -0.0580231
ADARB1 adenosine deaminase, RNA-specific, B1 -0.05787
FRY furry homolog (Drosophila) -0.0562067
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.055441
RPS24 ribosomal protein S24 -0.0544918
LAMA4 laminin, alpha 4 -0.0544105
RNF213 ring finger protein 213 -0.0538312
FTH1 ferritin, heavy polypeptide 1 -0.0532325
SLC45A4 solute carrier family 45, member 4 -0.0527004
RPLP2 ribosomal protein, large, P2 -0.0504987
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0499018
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0472436
RPL27A ribosomal protein L27a -0.0460828
GMDS GDP-mannose 4,6-dehydratase -0.0460804
S100A10 S100 calcium binding protein A10 -0.0447085
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0439921
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0438904
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0427681
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0419361
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0411743
KRT8 keratin 8, type II -0.0408781
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0408562
EPB41L5 erythrocyte membrane protein band 4.1 like 5 -0.0406694
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.0393812
JUN jun proto-oncogene -0.0391936
DIAPH2 diaphanous-related formin 2 -0.0390327
RPS5 ribosomal protein S5 -0.0384162
RPS19 ribosomal protein S19 -0.0384017
SLC38A2 solute carrier family 38, member 2 -0.0381828
RPLP0 ribosomal protein, large, P0 -0.0379502
LOC112694756 uncharaterized LOC112694756 -0.0379013
FOXO3 forkhead box O3 -0.0377245
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0370906
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0363147
MCL1 myeloid cell leukemia 1 -0.0362483
MMP7 matrix metallopeptidase 7 -0.0361386
EIF1 eukaryotic translation initiation factor 1 -0.0361088
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0358259
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0354018
GNAS GNAS complex locus -0.0348418
RPS8 ribosomal protein S8 -0.0347861
RPS11 ribosomal protein S11 -0.0345953
RPS16 ribosomal protein S16 -0.0342152
RPL35A ribosomal protein L35a -0.0338033
TMEM123 transmembrane protein 123 -0.033277
RPL9 ribosomal protein L9 -0.0332184
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0330276
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.03292
EEF2 eukaryotic translation elongation factor 2 -0.0326039
HMGA1 high mobility group AT-hook 1 -0.0325434
RPS25 ribosomal protein S25 -0.0323978
RPL31 ribosomal protein L31 -0.0322533
DDIT3 DNA-damage-inducible transcript 3 -0.0317572
IFRD1 interferon-related developmental regulator 1 -0.0317509
TLE4 transducin-like enhancer of split 4 -0.0314824
RPL19 ribosomal protein L19 -0.0314613
WNT2B wingless-type MMTV integration site family, member 2B -0.0313852
PRR5L proline rich 5 like -0.0311216
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0308364
SERTAD2 SERTA domain containing 2 -0.0306489
ACTG1 actin gamma 1 -0.0306045
GSN gelsolin -0.0305819
RPL8 ribosomal protein L8 -0.0303236
VEGFA vascular endothelial growth factor A -0.0300939
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0295553
HMGB1 high mobility group box 1 -0.0294673
UBAP2 ubiquitin associated protein 2 -0.0294032
RPL28 ribosomal protein L28 -0.0292682
RPL12 ribosomal protein L12 -0.0291384
S100A6 S100 calcium binding protein A6 -0.0291187
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0290831
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.0289661
IARS1 isoleucyl-tRNA synthetase 1 -0.0289507
RPS13 ribosomal protein S13 -0.0289168
SDCBP syndecan binding protein (syntenin) -0.0283286
FBXO32 F-box protein 32 -0.0282484
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0279491
WDR45B WD repeat domain 45B -0.0279317
FBXO11 F-box protein 11 -0.0276679
HM13 histocompatibility (minor) 13 -0.0275833
RPL7A ribosomal protein L7a -0.0274239
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0273362