Larotrectinib sulfate_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0761149
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0696408
ATP13A3 ATPase type 13A3 0.068053
NAMPT nicotinamide phosphoribosyltransferase 0.0650593
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0616707
FNDC3B fibronectin type III domain containing 3B 0.0599716
ZNF841 zinc finger protein 841 0.0546124
UBA6 ubiquitin-like modifier activating enzyme 6 0.048786
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0479378
COL5A1 collagen, type V, alpha 1 0.0475254
SLC12A8 solute carrier family 12, member 8 0.0474601
ELL2 elongation factor, RNA polymerase II, 2 0.0466451
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0450299
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0421398
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0374839
ARF4 ADP-ribosylation factor 4 0.0365601
FLNB filamin B, beta 0.0352063
CD44 CD44 molecule (Indian blood group) 0.034405
NEK7 NIMA-related kinase 7 0.0343903
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0337003
B2M beta-2-microglobulin 0.0336602
PODXL podocalyxin-like 0.0324512
TRIO trio Rho guanine nucleotide exchange factor 0.031164
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0309589
TPM1 tropomyosin 1 (alpha) 0.0298267
GOLGA4 golgin A4 0.0293954
BASP1 brain abundant, membrane attached signal protein 1 0.0269435
COL4A2 collagen, type IV, alpha 2 0.0263579
TMEM41B transmembrane protein 41B 0.0256305
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0252555
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0239247
VGLL3 vestigial-like family member 3 0.0236579
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0228191
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0225148
TPD52 tumor protein D52 0.0221671
FOXP1 forkhead box P1 0.0214144
MT1X metallothionein 1X 0.0205189
TGFB2 transforming growth factor, beta 2 0.0204157
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0202738
BCL2L1 BCL2-like 1 0.0200013
SUCO SUN domain containing ossification factor 0.0194728
MKI67 marker of proliferation Ki-67 0.0192695
PPME1 protein phosphatase methylesterase 1 0.019245
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0191928
FTH1 ferritin, heavy polypeptide 1 0.018769
CCNL1 cyclin L1 0.0186258
MARCHF6 membrane associated ring-CH-type finger 6 0.0184216
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0182711
COL7A1 collagen, type VII, alpha 1 0.0182333
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0180989
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.017995
AFAP1 actin filament associated protein 1 0.0177903
IL6ST interleukin 6 signal transducer 0.0176781
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0174691
NCKAP1 NCK-associated protein 1 0.0174088
PTBP3 polypyrimidine tract binding protein 3 0.0173867
RHOBTB3 Rho-related BTB domain containing 3 0.0173231
TMF1 TATA element modulatory factor 1 0.017239
SMAP1 small ArfGAP 1 0.0170778
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0169678
MYH9 myosin, heavy chain 9, non-muscle 0.016376
VMP1 vacuole membrane protein 1 0.0162122
DGKD diacylglycerol kinase, delta 130kDa 0.0160929
OSMR oncostatin M receptor 0.0160512
CENPF centromere protein F, 350/400kDa 0.0159331
TAPBP TAP binding protein (tapasin) 0.0159142
ZEB2 zinc finger E-box binding homeobox 2 0.0157719
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.0154442
H1-4 H1.4 linker histone, cluster member 0.0153957
TM9SF2 transmembrane 9 superfamily member 2 0.0152658
HEG1 heart development protein with EGF-like domains 1 0.0152316
KTN1 kinectin 1 (kinesin receptor) 0.0151122
BHLHE40 basic helix-loop-helix family, member e40 0.0150901
NIPBL Nipped-B homolog (Drosophila) 0.0148786
SKIL SKI-like proto-oncogene 0.0147803
NPEPPS aminopeptidase puromycin sensitive 0.0146851
RB1CC1 RB1-inducible coiled-coil 1 0.0146162
SRP54 signal recognition particle 54kDa 0.0145967
COPB1 coatomer protein complex, subunit beta 1 0.0144564
TXNRD1 thioredoxin reductase 1 0.0144253
SCAF11 SR-related CTD-associated factor 11 0.0143442
ANXA5 annexin A5 0.0142452
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0141468
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0140457
PICALM phosphatidylinositol binding clathrin assembly protein 0.0139951
IFI6 interferon, alpha-inducible protein 6 0.0139528
BZW1 basic leucine zipper and W2 domains 1 0.0138672
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) 0.0138581
ANO6 anoctamin 6 0.0137618
RASA2 RAS p21 protein activator 2 0.0137104
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0136756
AGFG1 ArfGAP with FG repeats 1 0.0136404
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.013494
ECPAS Ecm29 proteasome adaptor and scaffold 0.0134487
ZFR zinc finger RNA binding protein 0.0133318
TPM3 tropomyosin 3 0.0133244
TMEM39A transmembrane protein 39A 0.0132257
ZFAND5 zinc finger, AN1-type domain 5 0.0132059
LOXL2 lysyl oxidase-like 2 0.0131807
TPX2 TPX2, microtubule-associated 0.0130848

decreased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 -0.164078
ABI3BP ABI family, member 3 (NESH) binding protein -0.111087
PHACTR1 phosphatase and actin regulator 1 -0.10575
IGFBP3 insulin-like growth factor binding protein 3 -0.100988
EXT1 exostosin glycosyltransferase 1 -0.0753147
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0744433
INTS6 integrator complex subunit 6 -0.0724333
NDRG1 N-myc downstream regulated 1 -0.0717258
DLG1 discs, large homolog 1 (Drosophila) -0.066866
SLIT2 slit homolog 2 (Drosophila) -0.0539007
DTNA dystrobrevin, alpha -0.0524599
FTL ferritin, light polypeptide -0.0497437
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0496784
TLE4 transducin-like enhancer of split 4 -0.0481726
ASPH aspartate beta-hydroxylase -0.0429376
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.042664
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0412389
TMSB10 thymosin beta 10 -0.040525
PKM pyruvate kinase, muscle -0.0394748
F3 coagulation factor III (thromboplastin, tissue factor) -0.0394673
ACTG1 actin gamma 1 -0.0386995
LPP LIM domain containing preferred translocation partner in lipoma -0.0361123
GLIS3 GLIS family zinc finger 3 -0.0345258
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0335625
ZSWIM6 zinc finger, SWIM-type containing 6 -0.033249
SDK1 sidekick cell adhesion molecule 1 -0.0324331
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0319095
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0308757
IGFBP5 insulin-like growth factor binding protein 5 -0.0303217
ZNF804A zinc finger protein 804A -0.0301326
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0294597
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0288082
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0286481
RPL35A ribosomal protein L35a -0.0281925
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0275714
DEK DEK proto-oncogene -0.0273313
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0269275
RAB7A RAB7A, member RAS oncogene family -0.0267288
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0259949
PRELID2 PRELI domain containing 2 -0.025273
VIM vimentin -0.0248954
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0245729
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0245383
ANXA2 annexin A2 -0.024242
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0241969
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0241771
NABP1 nucleic acid binding protein 1 -0.0241112
DIPK2A divergent protein kinase domain 2A -0.0240532
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0240171
E2F3 E2F transcription factor 3 -0.0230096
ADAM32 ADAM metallopeptidase domain 32 -0.0228406
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 -0.0224763
TPT1 tumor protein, translationally-controlled 1 -0.0221836
PTPRG protein tyrosine phosphatase, receptor type, G -0.0220092
POTEF POTE ankyrin domain family, member F -0.0213409
WSB1 WD repeat and SOCS box containing 1 -0.0211523
MBNL1 muscleblind-like splicing regulator 1 -0.0211059
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.02085
SAMD4A sterile alpha motif domain containing 4A -0.0207248
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0206359
DENND1A DENN/MADD domain containing 1A -0.0205568
ADM adrenomedullin -0.0202222
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0202145
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0201175
CAST calpastatin -0.0200893
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0199966
MAP1B microtubule-associated protein 1B -0.0196605
PLCB4 phospholipase C, beta 4 -0.0196449
VDAC1 voltage-dependent anion channel 1 -0.0191419
VCL vinculin -0.0185055
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0184904
AEBP2 AE binding protein 2 -0.0182313
RPLP2 ribosomal protein, large, P2 -0.0182213
HLA-B major histocompatibility complex, class I, B -0.0179963
HMGA1 high mobility group AT-hook 1 -0.0179121
CAVIN1 caveolae associated protein 1 -0.0179075
RIGI RNA sensor RIG-I -0.0176331
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0174457
RPS6 ribosomal protein S6 -0.0173754
SMYD3 SET and MYND domain containing 3 -0.0173749
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0172859
AHNAK AHNAK nucleoprotein -0.0169328
RPLP1 ribosomal protein, large, P1 -0.0168897
EEF2 eukaryotic translation elongation factor 2 -0.0165733
GLS2 glutaminase 2 (liver, mitochondrial) -0.0162273
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0162253
ENO1 enolase 1, (alpha) -0.0161813
MYO1E myosin IE -0.0160476
SPDYA speedy/RINGO cell cycle regulator family member A -0.0158093
CCDC80 coiled-coil domain containing 80 -0.0156718
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0156367
LMAN1 lectin, mannose-binding, 1 -0.0154712
THSD4 thrombospondin, type I, domain containing 4 -0.01542
UBAP2 ubiquitin associated protein 2 -0.0153964
HDAC9 histone deacetylase 9 -0.0153785
PDIA3 protein disulfide isomerase family A, member 3 -0.0153315
NSD2 nuclear receptor binding SET domain protein 2 -0.0151979
ANO4 anoctamin 4 -0.0151979
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0150363
PRKCA protein kinase C, alpha -0.0149257