Larotrectinib sulfate_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.489772
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.157463
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.12765
HYOU1 hypoxia up-regulated 1 0.111015
MYH9 myosin, heavy chain 9, non-muscle 0.101702
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0948995
PDIA4 protein disulfide isomerase family A, member 4 0.0734951
KRT18 keratin 18, type I 0.0713966
LMO7 LIM domain 7 0.0643296
PLEC plectin 0.0611738
GOLGA4 golgin A4 0.0590653
FNDC3B fibronectin type III domain containing 3B 0.0572178
GOLGB1 golgin B1 0.0552153
KDM3A lysine (K)-specific demethylase 3A 0.0522812
MBNL2 muscleblind-like splicing regulator 2 0.0517224
AKAP9 A kinase (PRKA) anchor protein 9 0.0515214
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0505165
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0491401
DSPP dentin sialophosphoprotein 0.0471019
EZR ezrin 0.0444692
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0415261
PHF3 PHD finger protein 3 0.040555
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0402731
CTNND1 catenin (cadherin-associated protein), delta 1 0.0402214
TMC5 transmembrane channel-like 5 0.0381644
LAMB3 laminin, beta 3 0.0372915
CANX calnexin 0.0359603
EIF4A2 eukaryotic translation initiation factor 4A2 0.0359102
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0356146
TMF1 TATA element modulatory factor 1 0.0348024
ERRFI1 ERBB receptor feedback inhibitor 1 0.0346435
DST dystonin 0.0340865
EIF1 eukaryotic translation initiation factor 1 0.0334329
TMSB4X thymosin beta 4, X-linked 0.0332268
AHNAK AHNAK nucleoprotein 0.0331853
FNIP1 folliculin interacting protein 1 0.0314456
AKAP13 A kinase (PRKA) anchor protein 13 0.0287978
MACF1 microtubule-actin crosslinking factor 1 0.0284036
HDLBP high density lipoprotein binding protein 0.0281813
DSCAM Down syndrome cell adhesion molecule 0.0280625
SERINC1 serine incorporator 1 0.0279207
FAM13A family with sequence similarity 13, member A 0.0276819
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0276018
RAB1A RAB1A, member RAS oncogene family 0.027491
NUMA1 nuclear mitotic apparatus protein 1 0.0274158
RB1CC1 RB1-inducible coiled-coil 1 0.0273731
KIF16B kinesin family member 16B 0.0273221
MYOF myoferlin 0.0267518
AHNAK2 AHNAK nucleoprotein 2 0.0265762
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0264818
ZNF292 zinc finger protein 292 0.026261
KRT17 keratin 17, type I 0.0261372
OGA O-GlcNAcase 0.0258014
CALCOCO2 calcium binding and coiled-coil domain 2 0.0257142
NCOR2 nuclear receptor corepressor 2 0.0255289
APLP2 amyloid beta (A4) precursor-like protein 2 0.0254523
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.025421
SRRM2 serine/arginine repetitive matrix 2 0.0247502
H1-0 H1.0 linker histone 0.0247403
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0245593
KLHL24 kelch-like family member 24 0.024537
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0244398
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0242857
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0241463
HKDC1 hexokinase domain containing 1 0.0240734
ARGLU1 arginine and glutamate rich 1 0.0239976
OXR1 oxidation resistance 1 0.023754
NDRG1 N-myc downstream regulated 1 0.0237014
TTC3 tetratricopeptide repeat domain 3 0.0234625
TXNIP thioredoxin interacting protein 0.0234171
TNRC6B trinucleotide repeat containing 6B 0.0233465
RAD21 RAD21 homolog (S. pombe) 0.0233
ZBTB20 zinc finger and BTB domain containing 20 0.0229679
HSPA8 heat shock 70kDa protein 8 0.0227643
NFE2L1 nuclear factor, erythroid 2-like 1 0.0226217
ANLN anillin, actin binding protein 0.022594
CTTN cortactin 0.0225527
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0223404
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0223188
NONO non-POU domain containing, octamer-binding 0.0222454
CAPN8 calpain 8 0.0222055
SPAG9 sperm associated antigen 9 0.0221557
SFTPA2 surfactant protein A2 0.022106
PPL periplakin 0.0220286
ATXN1 ataxin 1 0.0218019
CDK19 cyclin-dependent kinase 19 0.0217792
ATM ATM serine/threonine kinase 0.0217033
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0216668
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0214308
MORF4L2 mortality factor 4 like 2 0.0214042
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0213046
CPNE1 copine I 0.0212785
MUC17 mucin 17, cell surface associated 0.021093
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0210224
CALR calreticulin 0.0209815
HLA-E major histocompatibility complex, class I, E 0.0207595
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0207138
SSR1 signal sequence receptor, alpha 0.02068
KMT2A lysine (K)-specific methyltransferase 2A 0.0205622
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0205073

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.166991
GMDS GDP-mannose 4,6-dehydratase -0.158363
TMSB10 thymosin beta 10 -0.134108
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.112908
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10884
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0950113
CEMIP cell migration inducing protein, hyaluronan binding -0.0869087
POTEF POTE ankyrin domain family, member F -0.0754813
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0698034
RPL35A ribosomal protein L35a -0.0596664
S100A10 S100 calcium binding protein A10 -0.0547827
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0517238
ANXA2 annexin A2 -0.049825
LCN2 lipocalin 2 -0.0493264
ACACA acetyl-CoA carboxylase alpha -0.0478165
S100A6 S100 calcium binding protein A6 -0.0475329
INSIG1 insulin induced gene 1 -0.0470387
PKM pyruvate kinase, muscle -0.0470199
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0464583
GPX2 glutathione peroxidase 2 -0.0422854
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0411675
ATF5 activating transcription factor 5 -0.0394921
ITGA6 integrin, alpha 6 -0.038374
S100A9 S100 calcium binding protein A9 -0.0377435
IFI27 interferon, alpha-inducible protein 27 -0.0360036
S100A11 S100 calcium binding protein A11 -0.0358526
HMGA1 high mobility group AT-hook 1 -0.0357739
FTH1 ferritin, heavy polypeptide 1 -0.0356497
RPL23 ribosomal protein L23 -0.0351246
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0348633
LOC102724023 ES1 protein homolog, mitochondrial -0.0340814
TMEM123 transmembrane protein 123 -0.0324515
FASN fatty acid synthase -0.0321848
PRSS3 protease, serine, 3 -0.0321039
PFN1 profilin 1 -0.0320218
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0317788
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0305509
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0300911
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0297505
TNIK TRAF2 and NCK interacting kinase -0.0296011
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0293044
RPS6 ribosomal protein S6 -0.0291437
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0291286
RPLP1 ribosomal protein, large, P1 -0.0283668
CLDN7 claudin 7 -0.028233
MBNL1 muscleblind-like splicing regulator 1 -0.0273855
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.02687
C6ORF132 chromosome 6 open reading frame 132 -0.0268299
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0266063
LOC112694756 uncharaterized LOC112694756 -0.0265898
RPS19 ribosomal protein S19 -0.026562
PHF14 PHD finger protein 14 -0.0263954
PTMA prothymosin, alpha -0.0261297
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0260311
SULF2 sulfatase 2 -0.0256441
NHSL1 NHS-like 1 -0.0255511
DEK DEK proto-oncogene -0.02547
RAB7A RAB7A, member RAS oncogene family -0.0254443
DLG1 discs, large homolog 1 (Drosophila) -0.0252869
TTYH3 tweety family member 3 -0.025206
HMGB1 high mobility group box 1 -0.0250622
CBX3 chromobox homolog 3 -0.0250076
PRKCA protein kinase C, alpha -0.0249546
CLDN4 claudin 4 -0.0247495
ENO1 enolase 1, (alpha) -0.0246378
RPS24 ribosomal protein S24 -0.0246341
DIAPH2 diaphanous-related formin 2 -0.024608
COBL cordon-bleu WH2 repeat protein -0.023999
MCU mitochondrial calcium uniporter -0.0235257
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0234178
ZFP36L2 ZFP36 ring finger protein-like 2 -0.023276
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0231208
MUC1 mucin 1, cell surface associated -0.0227992
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.02278
RPS25 ribosomal protein S25 -0.0227347
PTPRG protein tyrosine phosphatase, receptor type, G -0.0226315
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0222259
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.022103
JUP junction plakoglobin -0.0218305
PDIA3 protein disulfide isomerase family A, member 3 -0.0217046
CAMKMT calmodulin-lysine N-methyltransferase -0.0217022
RPS21 ribosomal protein S21 -0.0209734
KPNB1 karyopherin (importin) beta 1 -0.0209535
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.020938
AHR aryl hydrocarbon receptor -0.0208136
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0205431
PKP4 plakophilin 4 -0.0204578
IFITM1 interferon induced transmembrane protein 1 -0.0201648
LAMA5 laminin, alpha 5 -0.0201557
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0198849
FBXO11 F-box protein 11 -0.0197903
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0196892
VDAC1 voltage-dependent anion channel 1 -0.0196805
SIK3 SIK family kinase 3 -0.0192673
TRPS1 trichorhinophalangeal syndrome I -0.019267
S100P S100 calcium binding protein P -0.0191767
IFITM3 interferon induced transmembrane protein 3 -0.0191191
CST3 cystatin C -0.0188511
TUBB4B tubulin, beta 4B class IVb -0.018811
HLA-A major histocompatibility complex, class I, A -0.0187112