Larotrectinib sulfate_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD109 CD109 molecule 0.0954908
TRIO trio Rho guanine nucleotide exchange factor 0.0929989
FMNL2 formin-like 2 0.087475
MMP12 matrix metallopeptidase 12 0.0767321
LSAMP limbic system-associated membrane protein 0.0686608
FOXP1 forkhead box P1 0.0638716
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0620357
AKAP12 A kinase (PRKA) anchor protein 12 0.0597057
PBX3 pre-B-cell leukemia homeobox 3 0.0568545
DST dystonin 0.0566348
KDM3A lysine (K)-specific demethylase 3A 0.0560468
SPAG9 sperm associated antigen 9 0.0526867
UBA6 ubiquitin-like modifier activating enzyme 6 0.0520304
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0520018
NALF1 NALCN channel auxiliary factor 1 0.0511746
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0501974
MYO10 myosin X 0.0490076
ELL2 elongation factor, RNA polymerase II, 2 0.0463405
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0458199
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0445342
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0439124
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0430222
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0429293
PTK2 protein tyrosine kinase 2 0.0423576
FNIP1 folliculin interacting protein 1 0.0412914
RUNX1 runt-related transcription factor 1 0.0405441
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0404288
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0372593
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0369899
FNDC3B fibronectin type III domain containing 3B 0.036896
KTN1 kinectin 1 (kinesin receptor) 0.0366871
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0352814
MYH9 myosin, heavy chain 9, non-muscle 0.0324531
JARID2 jumonji, AT rich interactive domain 2 0.0324081
HSPA8 heat shock 70kDa protein 8 0.0316013
MED13L mediator complex subunit 13-like 0.0313855
ANO6 anoctamin 6 0.0309541
ZNF292 zinc finger protein 292 0.0308282
RB1CC1 RB1-inducible coiled-coil 1 0.0307948
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0300419
NCKAP1 NCK-associated protein 1 0.0300106
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0296722
ERRFI1 ERBB receptor feedback inhibitor 1 0.0294929
ENKUR enkurin, TRPC channel interacting protein 0.0284018
ZMYM2 zinc finger, MYM-type 2 0.0280804
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0277622
MXI1 MAX interactor 1, dimerization protein 0.0276941
MCTP1 multiple C2 domains, transmembrane 1 0.0274662
EIF4B eukaryotic translation initiation factor 4B 0.0270249
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0268344
KMT2C lysine (K)-specific methyltransferase 2C 0.0266724
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0263588
NDRG1 N-myc downstream regulated 1 0.025923
ADAM19 ADAM metallopeptidase domain 19 0.0254037
SRRM2 serine/arginine repetitive matrix 2 0.0252421
FLNA filamin A, alpha 0.0248503
ATXN1 ataxin 1 0.0242667
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0239897
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0238848
CASC3 cancer susceptibility candidate 3 0.0238829
OGA O-GlcNAcase 0.0235923
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0235054
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0233962
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0226918
HDAC9 histone deacetylase 9 0.0226161
EFR3A EFR3 homolog A (S. cerevisiae) 0.0224892
SKIL SKI-like proto-oncogene 0.0224577
FRMD6 FERM domain containing 6 0.0221441
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0220925
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.021952
HOOK2 hook microtubule-tethering protein 2 0.0216597
SMAP1 small ArfGAP 1 0.0212795
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0209205
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.020873
PICALM phosphatidylinositol binding clathrin assembly protein 0.0207529
NAP1L1 nucleosome assembly protein 1-like 1 0.020704
NEK7 NIMA-related kinase 7 0.0206182
CDK19 cyclin-dependent kinase 19 0.0205698
MAP2K1 mitogen-activated protein kinase kinase 1 0.0204365
SPRED1 sprouty-related, EVH1 domain containing 1 0.0203516
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.020201
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0200847
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0199518
WAC WW domain containing adaptor with coiled-coil 0.0197339
RND3 Rho family GTPase 3 0.019508
NKTR natural killer cell triggering receptor 0.0193859
NRP2 neuropilin 2 0.0192431
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0189274
INHBA inhibin, beta A 0.018893
TM4SF19 transmembrane 4 L six family member 19 0.0188537
CORO1C coronin, actin binding protein, 1C 0.0187728
ARHGAP21 Rho GTPase activating protein 21 0.0186498
LAMB1 laminin, beta 1 0.0185597
CCNY cyclin Y 0.0184456
AFDN afadin, adherens junction formation factor 0.0182846
SERINC1 serine incorporator 1 0.0177516
PCBP2 poly(rC) binding protein 2 0.0177282
RPL7 ribosomal protein L7 0.017716
JMJD1C jumonji domain containing 1C 0.017622
YTHDC1 YTH domain containing 1 0.0175813

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.492765
TMSB10 thymosin beta 10 -0.114203
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0866483
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0775131
EXT1 exostosin glycosyltransferase 1 -0.0747501
ACTG1 actin gamma 1 -0.0669576
EGR1 early growth response 1 -0.0589777
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0583567
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0571405
NABP1 nucleic acid binding protein 1 -0.0525277
VIM vimentin -0.0513605
SAMD3 sterile alpha motif domain containing 3 -0.0508233
VCL vinculin -0.0500045
RPS6 ribosomal protein S6 -0.0491226
PHACTR1 phosphatase and actin regulator 1 -0.0477627
LOC112694756 uncharaterized LOC112694756 -0.0463952
RPLP1 ribosomal protein, large, P1 -0.0461115
ASPH aspartate beta-hydroxylase -0.045803
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0438069
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0428139
MT2A metallothionein 2A -0.042421
TPT1 tumor protein, translationally-controlled 1 -0.0413179
RPL35A ribosomal protein L35a -0.0367269
INTS6 integrator complex subunit 6 -0.0365342
PTCHD4 patched domain containing 4 -0.0359168
KIAA1217 KIAA1217 -0.0345774
FTL ferritin, light polypeptide -0.0339915
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0339746
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0335994
HMGA1 high mobility group AT-hook 1 -0.0330927
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0324214
STC1 stanniocalcin 1 -0.0309231
ALCAM activated leukocyte cell adhesion molecule -0.0294585
CDH13 cadherin 13 -0.0289844
KYNU kynureninase -0.0288735
RPLP0 ribosomal protein, large, P0 -0.0286301
PTMA prothymosin, alpha -0.0282595
RPS24 ribosomal protein S24 -0.027739
PKM pyruvate kinase, muscle -0.0275973
PTPRG protein tyrosine phosphatase, receptor type, G -0.026912
CDK6 cyclin-dependent kinase 6 -0.0260929
VDAC1 voltage-dependent anion channel 1 -0.0260078
RPL8 ribosomal protein L8 -0.0254128
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0249688
RPS19 ribosomal protein S19 -0.024895
RPS13 ribosomal protein S13 -0.0244276
TM4SF1 transmembrane 4 L six family member 1 -0.0243963
CFAP251 cilia and flagella associated protein 251 -0.0242509
RPS8 ribosomal protein S8 -0.0239307
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0233403
ZNF804A zinc finger protein 804A -0.0233251
PTPRD protein tyrosine phosphatase, receptor type, D -0.0230231
POTEF POTE ankyrin domain family, member F -0.0229091
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.022205
LDHA lactate dehydrogenase A -0.0219263
RPS20 ribosomal protein S20 -0.0212924
RPS25 ribosomal protein S25 -0.0212326
ERBIN erbb2 interacting protein -0.0210771
WNT2B wingless-type MMTV integration site family, member 2B -0.0210706
RPL23 ribosomal protein L23 -0.0209545
BPTF bromodomain PHD finger transcription factor -0.0207553
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0206985
ENO1 enolase 1, (alpha) -0.0205089
RPLP2 ribosomal protein, large, P2 -0.0204419
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0203695
ARHGAP18 Rho GTPase activating protein 18 -0.0202865
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0200781
WWC1 WW and C2 domain containing 1 -0.0199413
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0198656
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0191994
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0191768
PFN1 profilin 1 -0.019044
PDIA3 protein disulfide isomerase family A, member 3 -0.0190217
YBX1 Y box binding protein 1 -0.0186163
TMPRSS15 transmembrane protease, serine 15 -0.0185192
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0183597
NTM neurotrimin -0.0183132
SASH1 SAM and SH3 domain containing 1 -0.018128
TLE4 transducin-like enhancer of split 4 -0.018112
TPI1 triosephosphate isomerase 1 -0.0177127
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0167648
ASTN2 astrotactin 2 -0.0167479
RPS15 ribosomal protein S15 -0.0165791
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 -0.0164842
MSR1 macrophage scavenger receptor 1 -0.0164761
CAVIN1 caveolae associated protein 1 -0.0164417
RPS23 ribosomal protein S23 -0.0164404
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0163233
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0161927
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.016125
RPL34 ribosomal protein L34 -0.0161192
RPS5 ribosomal protein S5 -0.0160901
C2CD2 C2 calcium-dependent domain containing 2 -0.0159964
CSMD3 CUB and Sushi multiple domains 3 -0.0158927
RPS27A ribosomal protein S27a -0.0157657
DIAPH2 diaphanous-related formin 2 -0.0157257
AHNAK AHNAK nucleoprotein -0.0156438
TXNRD1 thioredoxin reductase 1 -0.0155455
RPL27A ribosomal protein L27a -0.0155185
RPL30 ribosomal protein L30 -0.0153585