Larotrectinib sulfate_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.282222
AKAP12 A kinase (PRKA) anchor protein 12 0.254768
GRAMD1B GRAM domain containing 1B 0.199403
PM20D1 peptidase M20 domain containing 1 0.0917821
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.08212
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0745655
HSPA8 heat shock 70kDa protein 8 0.0732331
VIM vimentin 0.0716559
WWOX WW domain containing oxidoreductase 0.069099
THSD4 thrombospondin, type I, domain containing 4 0.0603764
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0598686
MYH9 myosin, heavy chain 9, non-muscle 0.0583505
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0553352
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0529598
ERRFI1 ERBB receptor feedback inhibitor 1 0.0525903
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0522047
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0502429
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0489141
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0481904
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0447446
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0443639
TFPI2 tissue factor pathway inhibitor 2 0.0437131
AHNAK AHNAK nucleoprotein 0.0435246
IGF1R insulin-like growth factor 1 receptor 0.0430692
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0417558
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0412393
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0399345
NTN4 netrin 4 0.0377924
SMAD3 SMAD family member 3 0.0374731
RPL4 ribosomal protein L4 0.0373087
RPS3 ribosomal protein S3 0.0365078
FAM107B family with sequence similarity 107, member B 0.0360734
KIAA0319 KIAA0319 0.0357741
ASPH aspartate beta-hydroxylase 0.0353346
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0346058
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0345095
ELL2 elongation factor, RNA polymerase II, 2 0.0341874
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0332476
DGKD diacylglycerol kinase, delta 130kDa 0.0317127
BMP6 bone morphogenetic protein 6 0.0315145
NAP1L1 nucleosome assembly protein 1-like 1 0.0309054
TM4SF1 transmembrane 4 L six family member 1 0.0307003
CFLAR CASP8 and FADD-like apoptosis regulator 0.0306841
RB1CC1 RB1-inducible coiled-coil 1 0.0305407
DOCK5 dedicator of cytokinesis 5 0.0305013
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0298628
RPS2 ribosomal protein S2 0.0287074
RPL19 ribosomal protein L19 0.0285609
ATP11A ATPase, class VI, type 11A 0.0285486
PLEC plectin 0.0282567
EEF1G eukaryotic translation elongation factor 1 gamma 0.028057
FHIT fragile histidine triad 0.0277649
LRMDA leucine rich melanocyte differentiation associated 0.0277288
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0277145
DOCK4 dedicator of cytokinesis 4 0.0270927
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0263357
FMNL2 formin-like 2 0.0262612
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0260406
MCL1 myeloid cell leukemia 1 0.0260194
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0259318
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0258204
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0253541
MYOF myoferlin 0.0253419
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0252775
LAMB1 laminin, beta 1 0.0251585
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0248646
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0243783
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0238756
SERINC1 serine incorporator 1 0.0237036
SET SET nuclear proto-oncogene 0.0234966
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0230631
HMOX1 heme oxygenase 1 0.022953
DST dystonin 0.0226547
PFKP phosphofructokinase, platelet 0.0226104
RPL14 ribosomal protein L14 0.0225669
TPM3 tropomyosin 3 0.0220908
KDM3A lysine (K)-specific demethylase 3A 0.0217894
PTMA prothymosin, alpha 0.0216477
SOD2 superoxide dismutase 2, mitochondrial 0.0215985
H1-2 H1.2 linker histone, cluster member 0.0214014
RPL7 ribosomal protein L7 0.0210318
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0209422
MACF1 microtubule-actin crosslinking factor 1 0.020642
SEPTIN10 septin 10 0.0206175
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.020506
RPL26 ribosomal protein L26 0.0202153
CANX calnexin 0.0200233
APLP2 amyloid beta (A4) precursor-like protein 2 0.0200177
TRIO trio Rho guanine nucleotide exchange factor 0.0197891
GAN gigaxonin 0.0197876
LGALS12 lectin, galactoside-binding, soluble, 12 0.0197379
ZFAND6 zinc finger, AN1-type domain 6 0.0194678
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0191926
KLF6 Kruppel-like factor 6 0.0191855
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0190238
ITGB5 integrin, beta 5 0.0188542
RPS8 ribosomal protein S8 0.0186344
CAMTA1 calmodulin binding transcription activator 1 0.0185317
H1-4 H1.4 linker histone, cluster member 0.0183948
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0182016

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.192379
IGF2 insulin-like growth factor 2 -0.157737
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.13167
TMSB10 thymosin beta 10 -0.102052
POTEF POTE ankyrin domain family, member F -0.0967924
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0860238
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0845958
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0629012
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0583795
PTK2 protein tyrosine kinase 2 -0.0580287
FTL ferritin, light polypeptide -0.0570727
ZNF207 zinc finger protein 207 -0.0549528
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0545494
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0543103
S100A6 S100 calcium binding protein A6 -0.0516177
PKM pyruvate kinase, muscle -0.0486584
DENND4A DENN/MADD domain containing 4A -0.0483771
NOP58 NOP58 ribonucleoprotein -0.0482862
PFN1 profilin 1 -0.0481811
FGB fibrinogen beta chain -0.0475237
GLG1 golgi glycoprotein 1 -0.0472117
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0471787
HDAC9 histone deacetylase 9 -0.0462288
IGFBP3 insulin-like growth factor binding protein 3 -0.0455488
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0442311
ERBIN erbb2 interacting protein -0.0428198
DSCAM Down syndrome cell adhesion molecule -0.0418651
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0398042
COPA coatomer protein complex, subunit alpha -0.0392358
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0389648
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0388279
KMT2E lysine (K)-specific methyltransferase 2E -0.0387101
INO80 INO80 complex subunit -0.0385583
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0381532
HMGA1 high mobility group AT-hook 1 -0.0376109
SIK3 SIK family kinase 3 -0.0365858
BIRC6 baculoviral IAP repeat containing 6 -0.0359435
IGFBP4 insulin-like growth factor binding protein 4 -0.0352226
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0351678
SEC31A SEC31 homolog A (S. cerevisiae) -0.0341606
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0336021
KDM2A lysine (K)-specific demethylase 2A -0.033389
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0329602
ACACA acetyl-CoA carboxylase alpha -0.0325406
FTH1 ferritin, heavy polypeptide 1 -0.0324155
SRP54 signal recognition particle 54kDa -0.0323871
SPDYA speedy/RINGO cell cycle regulator family member A -0.0321589
FBXO11 F-box protein 11 -0.0317782
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0315247
COG5 component of oligomeric golgi complex 5 -0.0314005
ATP5F1B ATP synthase F1 subunit beta -0.0312044
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0311222
USP34 ubiquitin specific peptidase 34 -0.0308625
RHOA ras homolog family member A -0.0300846
AP1G1 adaptor-related protein complex 1, gamma 1 subunit -0.0300219
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.029784
WIPF2 WAS/WASL interacting protein family, member 2 -0.0294888
ACTG1 actin gamma 1 -0.0294642
RBM25 RNA binding motif protein 25 -0.0293318
HLA-B major histocompatibility complex, class I, B -0.0286821
RAB7A RAB7A, member RAS oncogene family -0.028551
LDHA lactate dehydrogenase A -0.0285485
PARD3 par-3 family cell polarity regulator -0.0275792
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0275416
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.027422
AK1 adenylate kinase 1 -0.0270433
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0269691
UTRN utrophin -0.0269535
NF1 neurofibromin 1 -0.0264379
HLA-A major histocompatibility complex, class I, A -0.026208
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0260561
TAGLN2 transgelin 2 -0.0258373
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0256032
ARF4 ADP-ribosylation factor 4 -0.0252593
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0251359
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0250768
RAB1A RAB1A, member RAS oncogene family -0.0250583
RBM39 RNA binding motif protein 39 -0.0248036
STRN3 striatin, calmodulin binding protein 3 -0.0247686
PTGES2 prostaglandin E synthase 2 -0.0247577
PUM1 pumilio RNA-binding family member 1 -0.0245932
CSNK1A1 casein kinase 1, alpha 1 -0.0236178
VDAC1 voltage-dependent anion channel 1 -0.0236015
TMEM87A transmembrane protein 87A -0.0235106
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0234051
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0233296
NUP58 nucleoporin 58 -0.0231945
BTBD7 BTB (POZ) domain containing 7 -0.0230654
IST1 increased sodium tolerance 1 homolog (yeast) -0.0227384
MTF2 metal response element binding transcription factor 2 -0.0225375
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.022458
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0223578
FOCAD focadhesin -0.0222737
BZW2 basic leucine zipper and W2 domains 2 -0.0222332
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0220186
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0219378
CHD9 chromodomain helicase DNA binding protein 9 -0.021935
MYADM myeloid-associated differentiation marker -0.0218591
ENO1 enolase 1, (alpha) -0.0218095
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0217431