Larotrectinib sulfate_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.153269
PDE10A phosphodiesterase 10A 0.0955466
FAM13A family with sequence similarity 13, member A 0.0834932
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0769034
NAMPT nicotinamide phosphoribosyltransferase 0.0732802
FLNB filamin B, beta 0.0732708
MARCHF6 membrane associated ring-CH-type finger 6 0.0647988
NDRG1 N-myc downstream regulated 1 0.0645974
PTK2 protein tyrosine kinase 2 0.0609545
FLNA filamin A, alpha 0.0599414
IRS2 insulin receptor substrate 2 0.0597047
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0577655
TTC3 tetratricopeptide repeat domain 3 0.0564916
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0558029
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0552579
SBF2 SET binding factor 2 0.0546206
RSRC2 arginine/serine-rich coiled-coil 2 0.0543407
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0540551
CNOT8 CCR4-NOT transcription complex, subunit 8 0.0532476
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0522177
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0508915
QKI QKI, KH domain containing, RNA binding 0.0508813
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0506497
HOOK2 hook microtubule-tethering protein 2 0.0505765
MATR3 matrin 3 0.0495593
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0473667
PTPRR protein tyrosine phosphatase, receptor type, R 0.0465753
NEMF nuclear export mediator factor 0.0459179
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0458835
COG5 component of oligomeric golgi complex 5 0.0456601
FNIP1 folliculin interacting protein 1 0.0454979
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0454911
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0450517
YEATS2 YEATS domain containing 2 0.0449719
PDE4D phosphodiesterase 4D, cAMP-specific 0.0446491
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0442991
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0437458
RAP1B RAP1B, member of RAS oncogene family 0.0436431
YY1AP1 YY1 associated protein 1 0.0428382
EML4 echinoderm microtubule associated protein like 4 0.0428106
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0423361
MYH9 myosin, heavy chain 9, non-muscle 0.0421586
RSF1 remodeling and spacing factor 1 0.0421182
POU2F1 POU class 2 homeobox 1 0.0419328
RORA RAR-related orphan receptor A 0.0416872
SEPTIN7 septin 7 0.0416163
RB1CC1 RB1-inducible coiled-coil 1 0.0411902
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0404875
CANX calnexin 0.0401507
FAM162A family with sequence similarity 162, member A 0.0400136
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.039989
RAD51B RAD51 paralog B 0.0398151
RASA2 RAS p21 protein activator 2 0.0398107
TRIO trio Rho guanine nucleotide exchange factor 0.0390465
PTBP2 polypyrimidine tract binding protein 2 0.0388222
NALF1 NALCN channel auxiliary factor 1 0.0387127
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0382825
OGA O-GlcNAcase 0.0380431
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0378453
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.0376864
ZFC3H1 zinc finger, C3H1-type containing 0.0370845
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0370689
HELZ helicase with zinc finger 0.0370426
DTNA dystrobrevin, alpha 0.0367734
RBM27 RNA binding motif protein 27 0.036651
HLA-E major histocompatibility complex, class I, E 0.0364224
ELL2 elongation factor, RNA polymerase II, 2 0.0360366
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0356861
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0350491
CDC73 cell division cycle 73 0.0346242
SCAF8 SR-related CTD-associated factor 8 0.0342976
MORF4L2 mortality factor 4 like 2 0.0342496
KLF6 Kruppel-like factor 6 0.0340615
FNDC3B fibronectin type III domain containing 3B 0.0339793
DENND4A DENN/MADD domain containing 4A 0.033769
PHF3 PHD finger protein 3 0.0334082
JMJD1C jumonji domain containing 1C 0.0333672
RUNX1 runt-related transcription factor 1 0.0333508
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0331661
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0327745
ZEB1 zinc finger E-box binding homeobox 1 0.0325951
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0323391
GIGYF2 GRB10 interacting GYF protein 2 0.0319734
KDM3A lysine (K)-specific demethylase 3A 0.0318333
NFE2L1 nuclear factor, erythroid 2-like 1 0.0315858
ACBD3 acyl-CoA binding domain containing 3 0.0315685
WAC WW domain containing adaptor with coiled-coil 0.0314822
SNX14 sorting nexin 14 0.0314562
UBA6 ubiquitin-like modifier activating enzyme 6 0.0313956
XRN2 5'-3' exoribonuclease 2 0.0313552
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0313224
MAP2K1 mitogen-activated protein kinase kinase 1 0.0312479
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0303581
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0303154
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0302364
PNRC1 proline-rich nuclear receptor coactivator 1 0.0301923
TBC1D22A TBC1 domain family, member 22A 0.0298917
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0297817
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0297646
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.029407

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.16346
MUC16 mucin 16, cell surface associated -0.105157
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0999658
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0966846
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.093738
MYO1E myosin IE -0.084042
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0789852
EXT1 exostosin glycosyltransferase 1 -0.0750868
IFIH1 interferon induced with helicase C domain 1 -0.0702589
LPP LIM domain containing preferred translocation partner in lipoma -0.0678392
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0648944
BACE2 beta-site APP-cleaving enzyme 2 -0.0633865
FBXO11 F-box protein 11 -0.0579032
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0548286
SVIL supervillin -0.0534139
IGF1R insulin-like growth factor 1 receptor -0.052578
HLA-B major histocompatibility complex, class I, B -0.051419
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0495873
ANXA2 annexin A2 -0.048441
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0482217
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.047758
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0476424
MMP1 matrix metallopeptidase 1 -0.0470031
ACTG1 actin gamma 1 -0.0461729
MACF1 microtubule-actin crosslinking factor 1 -0.0459519
COL6A3 collagen, type VI, alpha 3 -0.0446921
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0444686
C6ORF132 chromosome 6 open reading frame 132 -0.0439504
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0439208
OSMR oncostatin M receptor -0.0435012
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0431566
BCAS3 breast carcinoma amplified sequence 3 -0.0430745
ERBIN erbb2 interacting protein -0.0428738
CATSPERB catsper channel auxiliary subunit beta -0.0428385
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0424237
PTPRM protein tyrosine phosphatase, receptor type, M -0.0424028
MUC13 mucin 13, cell surface associated -0.0415024
MYO5B myosin VB -0.0404367
VIM vimentin -0.0403238
BPTF bromodomain PHD finger transcription factor -0.0402766
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0402476
MBD5 methyl-CpG binding domain protein 5 -0.0400001
JUP junction plakoglobin -0.0395121
AK1 adenylate kinase 1 -0.039304
FOXP1 forkhead box P1 -0.03917
PELI1 pellino E3 ubiquitin protein ligase 1 -0.038724
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.03861
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0374209
PERP PERP, TP53 apoptosis effector -0.036991
CDK14 cyclin-dependent kinase 14 -0.0369449
S100A10 S100 calcium binding protein A10 -0.0362374
MSI2 musashi RNA-binding protein 2 -0.0360787
TSC22D1 TSC22 domain family, member 1 -0.0360001
EGFR epidermal growth factor receptor -0.0359524
TMOD3 tropomodulin 3 (ubiquitous) -0.0358678
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0346861
MAML3 mastermind-like 3 (Drosophila) -0.0340165
MT2A metallothionein 2A -0.0335411
IGF2 insulin-like growth factor 2 -0.0334957
HIPK2 homeodomain interacting protein kinase 2 -0.0333118
BMAL2 basic helix-loop-helix ARNT like 2 -0.0333106
TNIK TRAF2 and NCK interacting kinase -0.0331499
FHIT fragile histidine triad -0.0323712
AGO2 argonaute RISC catalytic component 2 -0.0320156
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0318437
NKD1 naked cuticle homolog 1 (Drosophila) -0.0317657
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0313886
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0312737
RIGI RNA sensor RIG-I -0.0312068
EIF1 eukaryotic translation initiation factor 1 -0.0312031
FMN1 formin 1 -0.0309194
BLTP1 bridge-like lipid transfer protein family member 1 -0.0304875
MAML2 mastermind-like 2 (Drosophila) -0.0302409
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0302342
NHSL1 NHS-like 1 -0.0301925
PTMA prothymosin, alpha -0.0299729
THSD4 thrombospondin, type I, domain containing 4 -0.029937
RPS6 ribosomal protein S6 -0.0297859
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0295318
CUX1 cut-like homeobox 1 -0.0294453
ACTN4 actinin, alpha 4 -0.0293198
ATXN1 ataxin 1 -0.0291907
AHNAK AHNAK nucleoprotein -0.0291519
AKAP13 A kinase (PRKA) anchor protein 13 -0.0288497
CDK6 cyclin-dependent kinase 6 -0.0287091
OASL 2'-5'-oligoadenylate synthetase-like -0.028704
LDHA lactate dehydrogenase A -0.0287036
NCOR2 nuclear receptor corepressor 2 -0.0285125
F3 coagulation factor III (thromboplastin, tissue factor) -0.0285022
B2M beta-2-microglobulin -0.0284687
SRPK2 SRSF protein kinase 2 -0.0284252
MED13L mediator complex subunit 13-like -0.0279827
HMGA2 high mobility group AT-hook 2 -0.0278888
MAP7 microtubule-associated protein 7 -0.0276104
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0273448
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0273076
RPS8 ribosomal protein S8 -0.0272935
WASF2 WAS protein family, member 2 -0.0271835
CSNK1A1 casein kinase 1, alpha 1 -0.0271498
NUP98 nucleoporin 98kDa -0.0270827