Larotrectinib sulfate_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.100092
PSD3 pleckstrin and Sec7 domain containing 3 0.0857087
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0674546
EFNA5 ephrin-A5 0.0630611
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0618362
ASPH aspartate beta-hydroxylase 0.0601952
PCBP3 poly(rC) binding protein 3 0.058063
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0568448
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0504643
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0469766
PDE10A phosphodiesterase 10A 0.0439103
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0424555
FLNB filamin B, beta 0.0414255
LIMCH1 LIM and calponin homology domains 1 0.0407659
PYGL phosphorylase, glycogen, liver 0.0403387
FNDC3B fibronectin type III domain containing 3B 0.0400761
FNIP1 folliculin interacting protein 1 0.0394785
DOCK4 dedicator of cytokinesis 4 0.0382221
NRCAM neuronal cell adhesion molecule 0.0363582
FMNL2 formin-like 2 0.0325627
TRIO trio Rho guanine nucleotide exchange factor 0.0313187
MYH9 myosin, heavy chain 9, non-muscle 0.0301192
HSPA8 heat shock 70kDa protein 8 0.0288075
MAML3 mastermind-like 3 (Drosophila) 0.0276717
EXOC4 exocyst complex component 4 0.0274586
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0267283
NEK7 NIMA-related kinase 7 0.0245386
MCTP1 multiple C2 domains, transmembrane 1 0.0240294
ANTXR1 anthrax toxin receptor 1 0.0224369
PRELID2 PRELI domain containing 2 0.0217595
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.021749
SLC16A6 solute carrier family 16, member 6 0.0215285
ANKRD36 ankyrin repeat domain 36 0.0214545
NONO non-POU domain containing, octamer-binding 0.021169
THSD4 thrombospondin, type I, domain containing 4 0.0209434
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0205969
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0200093
MLKL mixed lineage kinase domain-like 0.0199177
SQSTM1 sequestosome 1 0.019671
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0193508
GIGYF2 GRB10 interacting GYF protein 2 0.0190068
IGF1R insulin-like growth factor 1 receptor 0.0189538
ESYT2 extended synaptotagmin-like protein 2 0.0188936
AHNAK AHNAK nucleoprotein 0.0187821
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0184938
BCAR3 breast cancer anti-estrogen resistance 3 0.0184608
AVL9 AVL9 homolog (S. cerevisiase) 0.0178515
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0177878
SDCCAG8 serologically defined colon cancer antigen 8 0.0175037
APP amyloid beta (A4) precursor protein 0.0174155
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0170422
DNAH14 dynein, axonemal, heavy chain 14 0.0170284
CFLAR CASP8 and FADD-like apoptosis regulator 0.0167769
SEPTIN10 septin 10 0.0165076
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0164491
TNIP1 TNFAIP3 interacting protein 1 0.0161346
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0160558
ANO6 anoctamin 6 0.0157494
TGFBR1 transforming growth factor, beta receptor 1 0.0156376
HDAC4 histone deacetylase 4 0.0154405
ADARB1 adenosine deaminase, RNA-specific, B1 0.0153794
GDA guanine deaminase 0.0153226
DST dystonin 0.0153185
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0149508
H1-4 H1.4 linker histone, cluster member 0.0148734
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0148427
AOPEP aminopeptidase O (putative) 0.0145638
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0145609
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.01451
ITPRID2 ITPR interacting domain containing 2 0.0144195
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0142344
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0139513
NBEAL1 neurobeachin-like 1 0.0137456
MSN moesin 0.0134037
IGF2R insulin-like growth factor 2 receptor 0.0132474
ANKRD36C ankyrin repeat domain 36C 0.013215
MYOF myoferlin 0.0131331
NPAS2 neuronal PAS domain protein 2 0.0131127
RAD51B RAD51 paralog B 0.0130084
FAM219A family with sequence similarity 219, member A 0.0129352
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0129045
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0128524
RABGAP1L RAB GTPase activating protein 1-like 0.0128048
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0127858
RPL3 ribosomal protein L3 0.0127765
BIRC2 baculoviral IAP repeat containing 2 0.0127084
NHSL1 NHS-like 1 0.0127029
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0126157
CEP170 centrosomal protein 170kDa 0.0124184
ARHGAP5 Rho GTPase activating protein 5 0.0123636
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0122975
LRMDA leucine rich melanocyte differentiation associated 0.0121758
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0121015
TTC28 tetratricopeptide repeat domain 28 0.0120613
PLEC plectin 0.0120148
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0119434
PDE4D phosphodiesterase 4D, cAMP-specific 0.0117913
PHF3 PHD finger protein 3 0.011784
NGLY1 N-glycanase 1 0.0117417
ZBTB38 zinc finger and BTB domain containing 38 0.0117226

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.402186
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.201654
TMSB10 thymosin beta 10 -0.145141
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.127394
VIM vimentin -0.116811
FTL ferritin, light polypeptide -0.106113
RPLP1 ribosomal protein, large, P1 -0.104336
IGFBP3 insulin-like growth factor binding protein 3 -0.0954176
RPS6 ribosomal protein S6 -0.0874478
PTMA prothymosin, alpha -0.0847889
TPT1 tumor protein, translationally-controlled 1 -0.080273
FTH1 ferritin, heavy polypeptide 1 -0.0758774
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0702592
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.070001
RPL35A ribosomal protein L35a -0.0680258
RPS19 ribosomal protein S19 -0.0666307
B2M beta-2-microglobulin -0.0636017
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0599475
PDIA3 protein disulfide isomerase family A, member 3 -0.0590483
RPS8 ribosomal protein S8 -0.0589854
RPL31 ribosomal protein L31 -0.0584988
RPS23 ribosomal protein S23 -0.0570018
GNAS GNAS complex locus -0.0559361
RPS24 ribosomal protein S24 -0.0528291
S100A6 S100 calcium binding protein A6 -0.0518194
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.051634
RPLP0 ribosomal protein, large, P0 -0.0515511
RPL12 ribosomal protein L12 -0.0515308
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0512379
HLA-A major histocompatibility complex, class I, A -0.0505356
PM20D1 peptidase M20 domain containing 1 -0.0499328
P3H2 prolyl 3-hydroxylase 2 -0.0486307
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0483898
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0472671
RPS12 ribosomal protein S12 -0.0470176
S100A10 S100 calcium binding protein A10 -0.046886
PKM pyruvate kinase, muscle -0.046864
RPS14 ribosomal protein S14 -0.0457314
BASP1 brain abundant, membrane attached signal protein 1 -0.0455102
LDHA lactate dehydrogenase A -0.0452609
RPL37A ribosomal protein L37a -0.0440372
EIF1 eukaryotic translation initiation factor 1 -0.043691
EGR1 early growth response 1 -0.0425147
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0415983
RPL19 ribosomal protein L19 -0.0410084
RPL23 ribosomal protein L23 -0.0408768
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0407242
TENT5A terminal nucleotidyltransferase 5A -0.0407014
UBC ubiquitin C -0.0404246
RPLP2 ribosomal protein, large, P2 -0.0402885
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0399297
RPS16 ribosomal protein S16 -0.0396051
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0393121
HLA-B major histocompatibility complex, class I, B -0.0393028
ENO1 enolase 1, (alpha) -0.0389401
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0383297
RPL34 ribosomal protein L34 -0.0380293
RPL36 ribosomal protein L36 -0.0370402
RPS25 ribosomal protein S25 -0.0368557
PDLIM5 PDZ and LIM domain 5 -0.0368042
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0367749
RPL26 ribosomal protein L26 -0.0366167
CANX calnexin -0.0362048
WSB1 WD repeat and SOCS box containing 1 -0.0361278
COL5A2 collagen, type V, alpha 2 -0.0360905
FNDC3A fibronectin type III domain containing 3A -0.0359495
RPL36A ribosomal protein L36a -0.0357596
RPS27 ribosomal protein S27 -0.0352868
HILPDA hypoxia inducible lipid droplet-associated -0.0352331
RPS29 ribosomal protein S29 -0.0350336
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0346412
VDAC1 voltage-dependent anion channel 1 -0.0344148
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0334941
RPS21 ribosomal protein S21 -0.0332318
NUP58 nucleoporin 58 -0.0332047
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.033154
RPL9 ribosomal protein L9 -0.0328633
VCL vinculin -0.0325877
RPS13 ribosomal protein S13 -0.0322885
PDIA6 protein disulfide isomerase family A, member 6 -0.0321751
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0320452
RPL28 ribosomal protein L28 -0.0312501
SOX4 SRY (sex determining region Y)-box 4 -0.0309583
MT2A metallothionein 2A -0.0308055
ASTN2 astrotactin 2 -0.030605
RPL11 ribosomal protein L11 -0.0302701
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.030269
PCBP2 poly(rC) binding protein 2 -0.0302363
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0302319
RPL37 ribosomal protein L37 -0.0298801
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0298764
PFN1 profilin 1 -0.0297364
RPS27A ribosomal protein S27a -0.0297199
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0296872
STC1 stanniocalcin 1 -0.0294442
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0293154
ANXA2 annexin A2 -0.0287495
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0286609
POTEF POTE ankyrin domain family, member F -0.028443
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0284281