Larotrectinib sulfate_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib sulfate perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib sulfate_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.124697
COL5A2 collagen, type V, alpha 2 0.103496
DST dystonin 0.0986771
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0896843
ZNF292 zinc finger protein 292 0.0840099
KMT2C lysine (K)-specific methyltransferase 2C 0.0671599
ADGRV1 adhesion G protein-coupled receptor V1 0.0649811
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0645247
KDM3A lysine (K)-specific demethylase 3A 0.064253
MYH9 myosin, heavy chain 9, non-muscle 0.0600881
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0569495
GPC3 glypican 3 0.0564304
AKAP9 A kinase (PRKA) anchor protein 9 0.0530657
COL11A1 collagen, type XI, alpha 1 0.049755
CFL2 cofilin 2 (muscle) 0.0496057
MYO10 myosin X 0.0483264
ITGAV integrin, alpha V 0.0480258
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0474302
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0471249
SHROOM3 shroom family member 3 0.0467641
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.045034
FOXG1 forkhead box G1 0.0448374
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0437486
JMJD1C jumonji domain containing 1C 0.0430948
COL3A1 collagen, type III, alpha 1 0.041223
PCBP2 poly(rC) binding protein 2 0.038486
ZEB2 zinc finger E-box binding homeobox 2 0.0372818
SLC38A2 solute carrier family 38, member 2 0.0372017
NCKAP1 NCK-associated protein 1 0.0371608
GASK1B golgi associated kinase 1B 0.0368155
MACF1 microtubule-actin crosslinking factor 1 0.0366139
MB21D2 Mab-21 domain containing 2 0.0359889
KCTD16 potassium channel tetramerization domain containing 16 0.0350911
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0350315
KIF1B kinesin family member 1B 0.0347708
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0344128
SKIC3 SKI3 subunit of superkiller complex 0.0343557
ZC3H12B zinc finger CCCH-type containing 12B 0.034305
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 0.0340246
NCOA2 nuclear receptor coactivator 2 0.033906
PCDH18 protocadherin 18 0.032731
PARD3B par-3 family cell polarity regulator beta 0.0327146
SERINC1 serine incorporator 1 0.0324679
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0320683
CADM2 cell adhesion molecule 2 0.0319397
SMYD3 SET and MYND domain containing 3 0.0309811
DOCK5 dedicator of cytokinesis 5 0.0309424
QKI QKI, KH domain containing, RNA binding 0.0307522
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0300834
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0297405
NCOR2 nuclear receptor corepressor 2 0.0295804
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0294417
ARHGAP15 Rho GTPase activating protein 15 0.0292637
LRRC4C leucine rich repeat containing 4C 0.0292177
SPAG9 sperm associated antigen 9 0.0287309
CAMKMT calmodulin-lysine N-methyltransferase 0.0285554
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0279362
H1-4 H1.4 linker histone, cluster member 0.0278428
VGLL4 vestigial-like family member 4 0.0275717
WDR43 WD repeat domain 43 0.0270938
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.0268032
SLK STE20-like kinase 0.0267672
CALCR calcitonin receptor 0.026416
BCAS3 breast carcinoma amplified sequence 3 0.026256
RHOH ras homolog family member H 0.0262542
UTRN utrophin 0.0259712
FNIP1 folliculin interacting protein 1 0.0257684
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0254973
TENM3 teneurin transmembrane protein 3 0.0253183
CAMTA1 calmodulin binding transcription activator 1 0.0252233
ZFAND3 zinc finger, AN1-type domain 3 0.0250834
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0249549
APP amyloid beta (A4) precursor protein 0.0249324
KLHL5 kelch-like family member 5 0.024599
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0245649
NCOA1 nuclear receptor coactivator 1 0.0243722
EXOC6B exocyst complex component 6B 0.0243081
MSN moesin 0.0242656
PDS5B PDS5 cohesin associated factor B 0.0242407
XPO1 exportin 1 0.0242191
PGK1 phosphoglycerate kinase 1 0.024179
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0240865
EXOC4 exocyst complex component 4 0.024004
APLP2 amyloid beta (A4) precursor-like protein 2 0.0237598
YAP1 Yes-associated protein 1 0.0234179
CASC3 cancer susceptibility candidate 3 0.0233769
MBD5 methyl-CpG binding domain protein 5 0.0233578
ATP11B ATPase, class VI, type 11B 0.0232183
DMXL1 Dmx-like 1 0.0230698
OSBPL8 oxysterol binding protein-like 8 0.0230509
LCA5 Leber congenital amaurosis 5 0.0230288
PRRC2C proline-rich coiled-coil 2C 0.0229471
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0229256
TBC1D12 TBC1 domain family, member 12 0.0228232
TRIO trio Rho guanine nucleotide exchange factor 0.0227446
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0225742
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0225607
UBE3A ubiquitin protein ligase E3A 0.0225507
TARS1 threonyl-tRNA synthetase 1 0.0224603
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0224241

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.184046
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.165487
TMSB10 thymosin beta 10 -0.139852
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.11133
ACTG1 actin gamma 1 -0.109555
RPS8 ribosomal protein S8 -0.107995
PTMA prothymosin, alpha -0.103448
RPS16 ribosomal protein S16 -0.0935489
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0922425
RPLP1 ribosomal protein, large, P1 -0.0847269
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0812784
RPS6 ribosomal protein S6 -0.0742345
TPT1 tumor protein, translationally-controlled 1 -0.0665726
GNAS GNAS complex locus -0.0589945
PCDH9 protocadherin 9 -0.0575885
PDIA3 protein disulfide isomerase family A, member 3 -0.057536
NOP58 NOP58 ribonucleoprotein -0.0572069
RPL35A ribosomal protein L35a -0.0567878
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0564496
RPS24 ribosomal protein S24 -0.0557794
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0551353
HSPB1 heat shock 27kDa protein 1 -0.050688
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0504676
FOXP2 forkhead box P2 -0.0482459
FTL ferritin, light polypeptide -0.047797
FBL fibrillarin -0.0475859
RPL12 ribosomal protein L12 -0.0470244
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0466941
POTEF POTE ankyrin domain family, member F -0.0465703
RBM25 RNA binding motif protein 25 -0.046389
RPL31 ribosomal protein L31 -0.0457999
S100A10 S100 calcium binding protein A10 -0.0456387
RPL30 ribosomal protein L30 -0.0444262
LOC102724023 ES1 protein homolog, mitochondrial -0.0443474
RPS19 ribosomal protein S19 -0.0438845
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0433435
MYL12B myosin, light chain 12B, regulatory -0.0427204
RPS25 ribosomal protein S25 -0.0426393
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0417282
DEK DEK proto-oncogene -0.0414667
GOLGA4 golgin A4 -0.04129
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0409675
MKI67 marker of proliferation Ki-67 -0.0400007
RPL37 ribosomal protein L37 -0.038594
RPS21 ribosomal protein S21 -0.0383177
MRPS30 mitochondrial ribosomal protein S30 -0.0382573
THBS1 thrombospondin 1 -0.0379389
ARF1 ADP-ribosylation factor 1 -0.0378986
RPL8 ribosomal protein L8 -0.037632
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0374761
RLF rearranged L-myc fusion -0.0373363
ADGRL2 adhesion G protein-coupled receptor L2 -0.0371358
CNRIP1 cannabinoid receptor interacting protein 1 -0.0367606
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0367285
RPL38 ribosomal protein L38 -0.0361674
RPL19 ribosomal protein L19 -0.0354699
CAVIN1 caveolae associated protein 1 -0.0352772
WSB1 WD repeat and SOCS box containing 1 -0.0352721
PFN1 profilin 1 -0.0352068
PUM1 pumilio RNA-binding family member 1 -0.0347673
APOE apolipoprotein E -0.0347574
HMGB1 high mobility group box 1 -0.0346192
ATP5F1B ATP synthase F1 subunit beta -0.0341255
SERF2 small EDRK-rich factor 2 -0.033979
RPS15 ribosomal protein S15 -0.0338978
RPS27 ribosomal protein S27 -0.0332942
STRN3 striatin, calmodulin binding protein 3 -0.0330862
INTS6 integrator complex subunit 6 -0.0330426
SRP72 signal recognition particle 72kDa -0.0329026
RPLP2 ribosomal protein, large, P2 -0.032833
TXNRD1 thioredoxin reductase 1 -0.0327966
RPS3 ribosomal protein S3 -0.0327345
RACK1 receptor for activated C kinase 1 -0.032423
BPTF bromodomain PHD finger transcription factor -0.0323693
RPL28 ribosomal protein L28 -0.0323621
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0323467
RPLP0 ribosomal protein, large, P0 -0.0318642
RPS27A ribosomal protein S27a -0.0318138
MDK midkine (neurite growth-promoting factor 2) -0.0317479
SLC38A1 solute carrier family 38, member 1 -0.0316058
HSPH1 heat shock 105kDa/110kDa protein 1 -0.031404
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0311456
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0311293
NCOR1 nuclear receptor corepressor 1 -0.0309109
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0307112
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0304824
RPL34 ribosomal protein L34 -0.0304362
EIF1 eukaryotic translation initiation factor 1 -0.0302637
SNX6 sorting nexin 6 -0.0301527
FAM171B family with sequence similarity 171, member B -0.0301026
URI1 URI1, prefoldin-like chaperone -0.0297679
MARCHF6 membrane associated ring-CH-type finger 6 -0.0296911
RPL9 ribosomal protein L9 -0.0295723
RPL11 ribosomal protein L11 -0.029537
BSG basigin (Ok blood group) -0.0294729
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0294689
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0294547
ACTN4 actinin, alpha 4 -0.0290466
CDH19 cadherin 19, type 2 -0.0289457
IARS1 isoleucyl-tRNA synthetase 1 -0.028894