Larotrectinib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.0885655
DST dystonin 0.0778399
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0662983
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0645846
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.059266
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0591784
RUNX1 runt-related transcription factor 1 0.056386
PDE10A phosphodiesterase 10A 0.0548504
NALF1 NALCN channel auxiliary factor 1 0.0546374
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0502441
PDE4D phosphodiesterase 4D, cAMP-specific 0.0491976
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.048827
MCTP1 multiple C2 domains, transmembrane 1 0.0488228
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0472449
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0470822
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0467112
LIMCH1 LIM and calponin homology domains 1 0.0465812
ANKRD17 ankyrin repeat domain 17 0.0457116
RIGI RNA sensor RIG-I 0.0452017
ANKHD1 ankyrin repeat and KH domain containing 1 0.0425511
AK1 adenylate kinase 1 0.0421815
INHBA inhibin, beta A 0.0416142
IFIH1 interferon induced with helicase C domain 1 0.0413927
GMDS GDP-mannose 4,6-dehydratase 0.040876
LAMA4 laminin, alpha 4 0.0405546
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.04
PRKCE protein kinase C, epsilon 0.0394392
GLCCI1 glucocorticoid induced 1 0.0393675
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0386845
NKD1 naked cuticle homolog 1 (Drosophila) 0.0382763
AGO3 argonaute RISC catalytic component 3 0.0377189
MACF1 microtubule-actin crosslinking factor 1 0.0375571
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0367678
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0349756
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0349
ZEB1 zinc finger E-box binding homeobox 1 0.0348772
OSBPL8 oxysterol binding protein-like 8 0.0347261
RPL26 ribosomal protein L26 0.0345074
DOCK5 dedicator of cytokinesis 5 0.0341476
ZSWIM6 zinc finger, SWIM-type containing 6 0.0341252
SMAD2 SMAD family member 2 0.034022
SVIL supervillin 0.0333827
EFNA5 ephrin-A5 0.0333461
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0327474
GOLGA4 golgin A4 0.032403
CNKSR3 CNKSR family member 3 0.0323428
HMGA2 high mobility group AT-hook 2 0.0319835
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0318814
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0317029
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0313853
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0311022
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0310977
EPAS1 endothelial PAS domain protein 1 0.0310852
KIF5B kinesin family member 5B 0.0308901
CD44 CD44 molecule (Indian blood group) 0.0305455
CYRIB CYFIP related Rac1 interactor B 0.0303653
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0303305
SRSF11 serine/arginine-rich splicing factor 11 0.0303207
URI1 URI1, prefoldin-like chaperone 0.0301337
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0298633
GLS2 glutaminase 2 (liver, mitochondrial) 0.0297015
RAD51B RAD51 paralog B 0.0296373
GLG1 golgi glycoprotein 1 0.0295945
RPS20 ribosomal protein S20 0.029324
GPHN gephyrin 0.0291799
FAM168A family with sequence similarity 168, member A 0.0290421
PRKCA protein kinase C, alpha 0.0289823
THSD4 thrombospondin, type I, domain containing 4 0.0289328
TBC1D5 TBC1 domain family, member 5 0.0287461
ACTN4 actinin, alpha 4 0.028718
KDM4C lysine (K)-specific demethylase 4C 0.0287074
SDK1 sidekick cell adhesion molecule 1 0.0283455
PUM2 pumilio RNA-binding family member 2 0.0280509
EIF1 eukaryotic translation initiation factor 1 0.0273987
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0273838
ABI3BP ABI family, member 3 (NESH) binding protein 0.0273825
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0272261
NCOR1 nuclear receptor corepressor 1 0.0271776
CARD16 caspase recruitment domain family, member 16 0.0269598
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0267539
RPS27A ribosomal protein S27a 0.026478
KDM5A lysine (K)-specific demethylase 5A 0.0262622
CUL4A cullin 4A 0.0261803
TPM3 tropomyosin 3 0.0260239
CDH13 cadherin 13 0.0258308
EXOC6B exocyst complex component 6B 0.0258239
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0256332
SCFD1 sec1 family domain containing 1 0.0251007
NBEA neurobeachin 0.0250729
MAP1B microtubule-associated protein 1B 0.0248043
DENND4C DENN/MADD domain containing 4C 0.0247592
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0247419
HSPH1 heat shock 105kDa/110kDa protein 1 0.0247058
AREG amphiregulin 0.0246354
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0246051
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0246013
ZCCHC7 zinc finger, CCHC domain containing 7 0.0245048
WAPL WAPL cohesin release factor 0.0241365
SLTM SAFB-like, transcription modulator 0.0241065
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0239826

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.189833
FTL ferritin, light polypeptide -0.122925
VIM vimentin -0.0994625
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0877207
KRT17 keratin 17, type I -0.0759233
KMT2C lysine (K)-specific methyltransferase 2C -0.073048
NDRG1 N-myc downstream regulated 1 -0.0628528
S100A9 S100 calcium binding protein A9 -0.0609046
NCOA3 nuclear receptor coactivator 3 -0.0600234
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0585775
RAB1A RAB1A, member RAS oncogene family -0.0563387
PRRC2C proline-rich coiled-coil 2C -0.0551794
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0538505
RPL23 ribosomal protein L23 -0.0537749
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0527598
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0512993
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0510215
BTG1 B-cell translocation gene 1, anti-proliferative -0.0499668
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.049931
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0498495
SQSTM1 sequestosome 1 -0.0493663
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0493164
ZFAND3 zinc finger, AN1-type domain 3 -0.0487149
PKM pyruvate kinase, muscle -0.0484306
PGK1 phosphoglycerate kinase 1 -0.0473939
PARD3 par-3 family cell polarity regulator -0.0467889
TXNIP thioredoxin interacting protein -0.0466442
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0458541
SEC31A SEC31 homolog A (S. cerevisiae) -0.0449197
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0448798
TMSB10 thymosin beta 10 -0.044866
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0433181
TPT1 tumor protein, translationally-controlled 1 -0.0429511
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0428827
ANXA1 annexin A1 -0.0424382
UBE2H ubiquitin-conjugating enzyme E2H -0.041913
TMEM123 transmembrane protein 123 -0.0416461
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0399562
PHF21A PHD finger protein 21A -0.0382625
SLMAP sarcolemma associated protein -0.0381386
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0379907
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0377422
GRB10 growth factor receptor-bound protein 10 -0.0374913
CUL3 cullin 3 -0.037401
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0373766
KDM5B lysine (K)-specific demethylase 5B -0.0370742
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0368944
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0364238
HILPDA hypoxia inducible lipid droplet-associated -0.0364224
ATOSA atos homolog A -0.0362609
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.036203
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0359624
RAD23B RAD23 homolog B (S. cerevisiae) -0.0355939
MYO1E myosin IE -0.0353668
RPL19 ribosomal protein L19 -0.0352861
PDIA3 protein disulfide isomerase family A, member 3 -0.0351558
AKAP9 A kinase (PRKA) anchor protein 9 -0.0348604
CALU calumenin -0.0346691
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 -0.033628
ACBD3 acyl-CoA binding domain containing 3 -0.0331746
RPL32 ribosomal protein L32 -0.0330398
WASF2 WAS protein family, member 2 -0.0329724
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0326888
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0326319
ARHGAP21 Rho GTPase activating protein 21 -0.0322867
ITCH itchy E3 ubiquitin protein ligase -0.0321732
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0318595
ACTG1 actin gamma 1 -0.0313351
ATXN1 ataxin 1 -0.0309571
RBM39 RNA binding motif protein 39 -0.0307725
SOD2 superoxide dismutase 2, mitochondrial -0.0304032
TSC22D2 TSC22 domain family, member 2 -0.0303562
AMBRA1 autophagy/beclin-1 regulator 1 -0.0303381
NAMPT nicotinamide phosphoribosyltransferase -0.0302769
MATR3 matrin 3 -0.0300028
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0298802
CCNI cyclin I -0.029775
COPA coatomer protein complex, subunit alpha -0.0295522
MACC1 metastasis associated in colon cancer 1 -0.0295107
TPR translocated promoter region, nuclear basket protein -0.0293692
PLAUR plasminogen activator, urokinase receptor -0.0290848
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0287633
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0284066
H3-3B H3.3 histone B -0.0284018
CLTC clathrin, heavy chain (Hc) -0.0282774
GPBP1 GC-rich promoter binding protein 1 -0.02784
CANX calnexin -0.0277607
CUL1 cullin 1 -0.0275524
RPL7A ribosomal protein L7a -0.0274056
STEAP4 STEAP family member 4 -0.0270632
SREBF2 sterol regulatory element binding transcription factor 2 -0.0269457
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0266454
AGFG1 ArfGAP with FG repeats 1 -0.0263179
UBAP1 ubiquitin associated protein 1 -0.0262857
S100A10 S100 calcium binding protein A10 -0.0262842
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.02625
EPSTI1 epithelial stromal interaction 1 (breast) -0.0261521
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0261255
RPS11 ribosomal protein S11 -0.0260828
SIK3 SIK family kinase 3 -0.0260375