Larotrectinib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Larotrectinib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Larotrectinib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.118841
GRAMD1B GRAM domain containing 1B 0.114809
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.109386
COL8A1 collagen, type VIII, alpha 1 0.106523
PM20D1 peptidase M20 domain containing 1 0.0873759
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0855915
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0834773
PDE4D phosphodiesterase 4D, cAMP-specific 0.0828781
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0728107
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0666419
DST dystonin 0.0649647
FTH1 ferritin, heavy polypeptide 1 0.0568886
PDLIM5 PDZ and LIM domain 5 0.0516845
EEF2 eukaryotic translation elongation factor 2 0.0513233
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0503952
ANTXR1 anthrax toxin receptor 1 0.047675
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0472802
PSD3 pleckstrin and Sec7 domain containing 3 0.046578
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0446846
PRRC2C proline-rich coiled-coil 2C 0.0445154
CENPF centromere protein F, 350/400kDa 0.0444723
KYNU kynureninase 0.043925
IGFBP3 insulin-like growth factor binding protein 3 0.0437193
TPM3 tropomyosin 3 0.0433759
TXNRD1 thioredoxin reductase 1 0.042331
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0421461
RPS6 ribosomal protein S6 0.042043
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0410568
P3H2 prolyl 3-hydroxylase 2 0.0400363
HSPA8 heat shock 70kDa protein 8 0.0381729
EGR1 early growth response 1 0.0365069
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0358553
MSN moesin 0.0357338
PCBP2 poly(rC) binding protein 2 0.0353475
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0340564
ESYT2 extended synaptotagmin-like protein 2 0.0339013
GPRIN3 GPRIN family member 3 0.0338375
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0333817
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0325494
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0316381
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0305699
NAMPT nicotinamide phosphoribosyltransferase 0.0299768
KTN1 kinectin 1 (kinesin receptor) 0.0299139
SLF1 SMC5-SMC6 complex localization factor 1 0.0295596
RAB3B RAB3B, member RAS oncogene family 0.0293282
NEK7 NIMA-related kinase 7 0.0292431
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0291533
COL5A2 collagen, type V, alpha 2 0.0277306
YBX1 Y box binding protein 1 0.0271918
RPL3 ribosomal protein L3 0.0271684
ZEB2 zinc finger E-box binding homeobox 2 0.0270242
EEF1G eukaryotic translation elongation factor 1 gamma 0.0267482
MYO10 myosin X 0.0266829
APLP2 amyloid beta (A4) precursor-like protein 2 0.0262993
NRG1 neuregulin 1 0.025809
TMX4 thioredoxin-related transmembrane protein 4 0.025483
EZR ezrin 0.0252292
NUP58 nucleoporin 58 0.0249417
CSRP1 cysteine and glycine-rich protein 1 0.0247699
LSAMP limbic system-associated membrane protein 0.0244479
SET SET nuclear proto-oncogene 0.0240668
DOCK4 dedicator of cytokinesis 4 0.0238611
NCOR2 nuclear receptor corepressor 2 0.0235876
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0234572
MKI67 marker of proliferation Ki-67 0.0230501
PKM pyruvate kinase, muscle 0.0227953
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0227923
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.0223585
PFN1 profilin 1 0.0223303
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0222879
RPS2 ribosomal protein S2 0.0218413
LDHA lactate dehydrogenase A 0.021774
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0217721
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0217096
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0214847
CTIF CBP80/20-dependent translation initiation factor 0.0213578
SERBP1 SERPINE1 mRNA binding protein 1 0.0212202
DOCK5 dedicator of cytokinesis 5 0.0211787
RPL23 ribosomal protein L23 0.0211333
SMOC1 SPARC related modular calcium binding 1 0.0209216
DISP1 dispatched homolog 1 (Drosophila) 0.0207095
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0204811
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0204354
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0201569
CHL1 cell adhesion molecule L1-like 0.0200119
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0198885
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0198636
CLU clusterin 0.0198371
SH3KBP1 SH3-domain kinase binding protein 1 0.019449
MYH9 myosin, heavy chain 9, non-muscle 0.0190427
PAPOLA poly(A) polymerase alpha 0.0190139
SMC1A structural maintenance of chromosomes 1A 0.0187063
ELL2 elongation factor, RNA polymerase II, 2 0.0186349
SRRM2 serine/arginine repetitive matrix 2 0.0181041
ENO1 enolase 1, (alpha) 0.0179239
HSPE1 heat shock 10kDa protein 1 0.0177816
VMP1 vacuole membrane protein 1 0.0177093
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0174818
CXCL8 chemokine (C-X-C motif) ligand 8 0.0173042
GPAT3 glycerol-3-phosphate acyltransferase 3 0.017301

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.167552
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.142516
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.107035
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.103942
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0986275
FN1 fibronectin 1 -0.0947203
RPS24 ribosomal protein S24 -0.0869951
TM4SF1 transmembrane 4 L six family member 1 -0.0848832
EFNA5 ephrin-A5 -0.0785824
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0701506
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0687823
VIM vimentin -0.0683511
CDH13 cadherin 13 -0.0647913
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0614697
PCBP3 poly(rC) binding protein 3 -0.0542326
SMYD3 SET and MYND domain containing 3 -0.0499138
TFPI2 tissue factor pathway inhibitor 2 -0.0488599
S100A6 S100 calcium binding protein A6 -0.0473171
RPLP0 ribosomal protein, large, P0 -0.0455583
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0440079
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0434794
RPL38 ribosomal protein L38 -0.0432662
NPAS2 neuronal PAS domain protein 2 -0.043133
RPL31 ribosomal protein L31 -0.0428658
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0428145
RPLP1 ribosomal protein, large, P1 -0.0428099
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0426098
CANX calnexin -0.0422633
WSB1 WD repeat and SOCS box containing 1 -0.0399717
BASP1 brain abundant, membrane attached signal protein 1 -0.0395971
TMSB10 thymosin beta 10 -0.0388273
RPL35A ribosomal protein L35a -0.0385547
RPS27A ribosomal protein S27a -0.0382918
AUTS2 autism susceptibility candidate 2 -0.0377378
ACTG1 actin gamma 1 -0.0376857
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0374723
S100A10 S100 calcium binding protein A10 -0.0372575
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.037028
SLC16A6 solute carrier family 16, member 6 -0.0365801
RPL7A ribosomal protein L7a -0.0363666
RPL36A ribosomal protein L36a -0.0361159
AHNAK AHNAK nucleoprotein -0.0358672
RPS21 ribosomal protein S21 -0.0346508
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0338174
NCOA7 nuclear receptor coactivator 7 -0.0336946
RPL26 ribosomal protein L26 -0.0336914
VCL vinculin -0.0336878
NCKAP5 NCK-associated protein 5 -0.0328157
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.032627
GDA guanine deaminase -0.0321694
SOD2 superoxide dismutase 2, mitochondrial -0.031702
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0312726
IER3 immediate early response 3 -0.0311918
PGK1 phosphoglycerate kinase 1 -0.0307024
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0304653
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0301132
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0291271
PTMA prothymosin, alpha -0.0289696
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0289416
RPL9 ribosomal protein L9 -0.028607
EIF1 eukaryotic translation initiation factor 1 -0.0284475
ANXA2 annexin A2 -0.0278076
HDAC8 histone deacetylase 8 -0.0277418
RPL34 ribosomal protein L34 -0.0276007
RPS16 ribosomal protein S16 -0.02748
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0272938
RPS25 ribosomal protein S25 -0.0270788
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0270591
LMNA lamin A/C -0.0269664
RANBP17 RAN binding protein 17 -0.0269533
TMSB4X thymosin beta 4, X-linked -0.0269214
SMAD2 SMAD family member 2 -0.0269125
IGF1R insulin-like growth factor 1 receptor -0.0264592
TAS2R14 taste receptor, type 2, member 14 -0.0264321
GNAS GNAS complex locus -0.0254679
NALF1 NALCN channel auxiliary factor 1 -0.0253686
FNIP1 folliculin interacting protein 1 -0.0253656
TBXT T-box transcription factor T -0.0250306
SRGN serglycin -0.0248403
BZW1 basic leucine zipper and W2 domains 1 -0.024833
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0248026
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0245839
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.024497
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0244881
RPL12 ribosomal protein L12 -0.0244005
DENND1A DENN/MADD domain containing 1A -0.0243126
RPS29 ribosomal protein S29 -0.0239722
UBC ubiquitin C -0.0237252
CAMTA1 calmodulin binding transcription activator 1 -0.0236828
RAB1A RAB1A, member RAS oncogene family -0.0235131
SEC31A SEC31 homolog A (S. cerevisiae) -0.0234729
KDM3A lysine (K)-specific demethylase 3A -0.0234236
RPL19 ribosomal protein L19 -0.0230948
NAP1L1 nucleosome assembly protein 1-like 1 -0.0229941
DIAPH2 diaphanous-related formin 2 -0.0229847
RAB31 RAB31, member RAS oncogene family -0.0227277
SBF2 SET binding factor 2 -0.0226617
ABLIM1 actin binding LIM protein 1 -0.0226285
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0226025
BABAM2 BRISC and BRCA1 A complex member 2 -0.0224928