Lenalidomide (hemihydrate)_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lenalidomide (hemihydrate) perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lenalidomide (hemihydrate)_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.166672
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.152607
RPS6 ribosomal protein S6 0.0987113
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0917603
VIM vimentin 0.085271
RPLP1 ribosomal protein, large, P1 0.0786749
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0758024
ACTG1 actin gamma 1 0.0702153
STC1 stanniocalcin 1 0.0581224
PDLIM5 PDZ and LIM domain 5 0.0577551
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0570364
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0540214
SLC38A2 solute carrier family 38, member 2 0.053293
DUSP5 dual specificity phosphatase 5 0.052891
MCL1 myeloid cell leukemia 1 0.0525152
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0506263
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0496914
ST6GAL2 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 0.0486891
ALCAM activated leukocyte cell adhesion molecule 0.048665
SMYD3 SET and MYND domain containing 3 0.0482244
PCBP2 poly(rC) binding protein 2 0.0469852
RPS19 ribosomal protein S19 0.0447727
RPL35A ribosomal protein L35a 0.0440684
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0440215
EPAS1 endothelial PAS domain protein 1 0.0438122
RICTOR RPTOR independent companion of MTOR, complex 2 0.0418352
AGO2 argonaute RISC catalytic component 2 0.0417301
FLNB filamin B, beta 0.0416619
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0414551
EIF1 eukaryotic translation initiation factor 1 0.0413172
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0406899
RPL23 ribosomal protein L23 0.0402692
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0402319
BMP6 bone morphogenetic protein 6 0.0394684
ZSWIM6 zinc finger, SWIM-type containing 6 0.0390604
MED13 mediator complex subunit 13 0.038878
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0384097
NAP1L1 nucleosome assembly protein 1-like 1 0.0374071
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0373572
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0361795
NRIP1 nuclear receptor interacting protein 1 0.0358051
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.035283
DOCK5 dedicator of cytokinesis 5 0.0352149
KANK1 KN motif and ankyrin repeat domains 1 0.0343008
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0339825
INTS6 integrator complex subunit 6 0.0331752
RPS20 ribosomal protein S20 0.0318072
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0308162
USP47 ubiquitin specific peptidase 47 0.0303913
MYO1E myosin IE 0.0302512
BPTF bromodomain PHD finger transcription factor 0.0301931
PDE4D phosphodiesterase 4D, cAMP-specific 0.0296986
HMGA2 high mobility group AT-hook 2 0.0296336
BASP1 brain abundant, membrane attached signal protein 1 0.029542
ERBIN erbb2 interacting protein 0.0293483
DUSP16 dual specificity phosphatase 16 0.0291627
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0289514
PAQR5 progestin and adipoQ receptor family member V 0.0286098
TOP1 topoisomerase (DNA) I 0.0283949
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0283378
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0282163
ZNF638 zinc finger protein 638 0.0281801
ETNK1 ethanolamine kinase 1 0.02802
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0278498
WWOX WW domain containing oxidoreductase 0.0277559
MAP7 microtubule-associated protein 7 0.0265078
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.026425
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0260993
KLF6 Kruppel-like factor 6 0.0258549
ATP13A3 ATPase type 13A3 0.0254275
PDE10A phosphodiesterase 10A 0.0253623
RND3 Rho family GTPase 3 0.0253153
ELL2 elongation factor, RNA polymerase II, 2 0.0249903
RPLP0 ribosomal protein, large, P0 0.0248532
AXL AXL receptor tyrosine kinase 0.0245436
RPL37A ribosomal protein L37a 0.0241756
GRAMD1B GRAM domain containing 1B 0.0239012
AADAC arylacetamide deacetylase 0.0238338
NABP1 nucleic acid binding protein 1 0.0236606
FNDC3A fibronectin type III domain containing 3A 0.0235307
SSH1 slingshot protein phosphatase 1 0.0233558
LMO7 LIM domain 7 0.0231621
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0229551
MED13L mediator complex subunit 13-like 0.0228803
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0228031
EGR1 early growth response 1 0.0226045
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.0225017
RSPO3 R-spondin 3 0.0222584
ITGB5 integrin, beta 5 0.0222507
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0221126
SMOC1 SPARC related modular calcium binding 1 0.0219641
CEMIP cell migration inducing protein, hyaluronan binding 0.021897
MCTP1 multiple C2 domains, transmembrane 1 0.0216403
MYO10 myosin X 0.0215983
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0215053
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0214081
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0212949
THSD4 thrombospondin, type I, domain containing 4 0.0212727
TMEM156 transmembrane protein 156 0.0210255
CCDC88A coiled-coil domain containing 88A 0.0208837

decreased expression

Symbol Name Standardized Value
STAT1 signal transducer and activator of transcription 1, 91kDa -0.133806
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.126524
TXNRD1 thioredoxin reductase 1 -0.117699
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.116395
AKR1C2 aldo-keto reductase family 1, member C2 -0.0912832
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0901155
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0866949
RNF213 ring finger protein 213 -0.0786621
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0752766
LDHA lactate dehydrogenase A -0.0750536
NDRG1 N-myc downstream regulated 1 -0.0740654
SOD2 superoxide dismutase 2, mitochondrial -0.0723796
VMP1 vacuole membrane protein 1 -0.072134
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0713268
TNS3 tensin 3 -0.0682043
SBF2 SET binding factor 2 -0.0639484
CLTC clathrin, heavy chain (Hc) -0.0629174
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0602982
GLIS3 GLIS family zinc finger 3 -0.0585191
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0557289
EHBP1 EH domain binding protein 1 -0.0554709
CANX calnexin -0.054712
CXCL5 chemokine (C-X-C motif) ligand 5 -0.0527238
ARHGAP26 Rho GTPase activating protein 26 -0.051793
TNIP1 TNFAIP3 interacting protein 1 -0.0513231
OSMR oncostatin M receptor -0.051278
CA12 carbonic anhydrase XII -0.0510312
MAP1B microtubule-associated protein 1B -0.0494161
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0487336
CMIP c-Maf inducing protein -0.0484979
RPS2 ribosomal protein S2 -0.0482547
AHNAK2 AHNAK nucleoprotein 2 -0.04781
KDM3A lysine (K)-specific demethylase 3A -0.0475651
BIRC6 baculoviral IAP repeat containing 6 -0.0466806
FAM107B family with sequence similarity 107, member B -0.0460884
AOPEP aminopeptidase O (putative) -0.0450895
RIGI RNA sensor RIG-I -0.0418372
CLINT1 clathrin interactor 1 -0.0411288
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0409387
NAMPT nicotinamide phosphoribosyltransferase -0.0405385
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0401216
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0394191
ASPH aspartate beta-hydroxylase -0.0394003
CENPF centromere protein F, 350/400kDa -0.0393583
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0391302
TCF12 transcription factor 12 -0.0378388
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0371446
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0367023
HDLBP high density lipoprotein binding protein -0.0366263
DSTN destrin (actin depolymerizing factor) -0.0364907
ADAR adenosine deaminase, RNA-specific -0.0362805
ATG7 autophagy related 7 -0.0361229
MKI67 marker of proliferation Ki-67 -0.035757
NCOA7 nuclear receptor coactivator 7 -0.0357454
ANLN anillin, actin binding protein -0.0357355
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0357112
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0356178
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.035175
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0348725
IGFBP4 insulin-like growth factor binding protein 4 -0.0348519
KRT18 keratin 18, type I -0.0347026
TTC28 tetratricopeptide repeat domain 28 -0.0346044
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0339322
ZMYND8 zinc finger, MYND-type containing 8 -0.0338663
MYOF myoferlin -0.033655
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0335528
RRBP1 ribosome binding protein 1 -0.0335359
IGF1R insulin-like growth factor 1 receptor -0.0333857
GOLGB1 golgin B1 -0.0331813
ANXA4 annexin A4 -0.0331618
LAMB3 laminin, beta 3 -0.0330153
TMSB10 thymosin beta 10 -0.0329845
RAI14 retinoic acid induced 14 -0.0328327
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0327589
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0324525
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0322448
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0321521
GPC6 glypican 6 -0.0321326
KRT7 keratin 7, type II -0.0316404
EXT1 exostosin glycosyltransferase 1 -0.0309865
KCTD9 potassium channel tetramerization domain containing 9 -0.0308075
TRIO trio Rho guanine nucleotide exchange factor -0.0303424
NRP1 neuropilin 1 -0.0302969
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0300832
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0296037
GARS1 glycyl-tRNA synthetase 1 -0.029579
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0293064
PGK1 phosphoglycerate kinase 1 -0.0292383
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0288605
LMNA lamin A/C -0.028833
ENO1 enolase 1, (alpha) -0.0287827
EREG epiregulin -0.0287362
CAMTA1 calmodulin binding transcription activator 1 -0.0286482
PLEC plectin -0.0281998
RAD21 RAD21 homolog (S. pombe) -0.0280607
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 -0.0279681
APP amyloid beta (A4) precursor protein -0.0278936
RPH3AL rabphilin 3A-like (without C2 domains) -0.0277769
TPM1 tropomyosin 1 (alpha) -0.0276654
TMSB4X thymosin beta 4, X-linked -0.0276465