Lenalidomide (hemihydrate)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lenalidomide (hemihydrate) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lenalidomide (hemihydrate)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0801175
MEIS2 Meis homeobox 2 0.0798247
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.061407
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.060807
TLE4 transducin-like enhancer of split 4 0.0585148
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0542209
SIK2 salt-inducible kinase 2 0.0539271
BCAS3 breast carcinoma amplified sequence 3 0.052144
RPS6 ribosomal protein S6 0.051652
ZSWIM6 zinc finger, SWIM-type containing 6 0.0509603
KLHL13 kelch-like family member 13 0.0503956
PLPP1 phospholipid phosphatase 1 0.0501424
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0496164
PCBP2 poly(rC) binding protein 2 0.0477774
GLCCI1 glucocorticoid induced 1 0.046411
RNF213 ring finger protein 213 0.0458864
VCL vinculin 0.045837
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0453653
RAD51B RAD51 paralog B 0.0446546
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0435907
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0429772
RIGI RNA sensor RIG-I 0.0426561
ZFHX3 zinc finger homeobox 3 0.0422093
RPL31 ribosomal protein L31 0.0407081
PTPRG protein tyrosine phosphatase, receptor type, G 0.0402743
PBX1 pre-B-cell leukemia homeobox 1 0.0398769
TPST1 tyrosylprotein sulfotransferase 1 0.0398554
WDPCP WD repeat containing planar cell polarity effector 0.0381341
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0379601
FHIT fragile histidine triad 0.0378944
ANTXR1 anthrax toxin receptor 1 0.037615
MX2 MX dynamin-like GTPase 2 0.0375274
LRP1B low density lipoprotein receptor-related protein 1B 0.0367131
RET ret proto-oncogene 0.0364005
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0363013
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0362219
SMYD3 SET and MYND domain containing 3 0.0356686
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0355784
N4BP2L2 NEDD4 binding protein 2-like 2 0.0349115
CD36 CD36 molecule (thrombospondin receptor) 0.0346363
ADGRB3 adhesion G protein-coupled receptor B3 0.0344436
RPLP1 ribosomal protein, large, P1 0.0337153
CADM2 cell adhesion molecule 2 0.0337096
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0336603
ANGPT1 angiopoietin 1 0.033441
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.033095
KDM4C lysine (K)-specific demethylase 4C 0.0319538
GREM2 gremlin 2, DAN family BMP antagonist 0.0317309
NRIP1 nuclear receptor interacting protein 1 0.0316867
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0315794
DCAF7 DDB1 and CUL4 associated factor 7 0.0308663
ESYT2 extended synaptotagmin-like protein 2 0.0303362
LIMS1 LIM and senescent cell antigen-like domains 1 0.0302933
RPL34 ribosomal protein L34 0.0300428
PTEN phosphatase and tensin homolog 0.0299155
PDE4D phosphodiesterase 4D, cAMP-specific 0.0298579
TBX2 T-box 2 0.029732
SDC2 syndecan 2 0.0294789
RPL23 ribosomal protein L23 0.0294289
FNDC3B fibronectin type III domain containing 3B 0.0290918
RPL27 ribosomal protein L27 0.0288691
NPAS2 neuronal PAS domain protein 2 0.028752
TNPO1 transportin 1 0.0286449
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0284739
PDIA3 protein disulfide isomerase family A, member 3 0.0284527
RPL37A ribosomal protein L37a 0.0284324
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0282233
CALD1 caldesmon 1 0.0281618
PLAGL1 pleiomorphic adenoma gene-like 1 0.0272919
FN1 fibronectin 1 0.0262229
PDE10A phosphodiesterase 10A 0.026013
PRKN parkin RBR E3 ubiquitin protein ligase 0.0257485
GAB2 GRB2-associated binding protein 2 0.0257163
SYT1 synaptotagmin I 0.0256347
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.0255549
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0254213
PCCA propionyl CoA carboxylase, alpha polypeptide 0.025148
B2M beta-2-microglobulin 0.0248888
INTS6 integrator complex subunit 6 0.0245599
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0242969
JMJD1C jumonji domain containing 1C 0.0242466
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.02415
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0237661
CUL5 cullin 5 0.0235539
RPL7 ribosomal protein L7 0.023477
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0232567
IFI44L interferon-induced protein 44-like 0.0231475
S100A9 S100 calcium binding protein A9 0.0231337
AUTS2 autism susceptibility candidate 2 0.0231313
IFI16 interferon, gamma-inducible protein 16 0.0230907
PNN pinin, desmosome associated protein 0.0229538
VMP1 vacuole membrane protein 1 0.0229373
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0228952
HELZ helicase with zinc finger 0.0225504
SPG11 spastic paraplegia 11 (autosomal recessive) 0.0222871
SP100 SP100 nuclear antigen 0.0222757
ZCCHC7 zinc finger, CCHC domain containing 7 0.0221285
SETX senataxin 0.0221075
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0220764
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0219872

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.0938722
IGF2 insulin-like growth factor 2 -0.0848177
COL3A1 collagen, type III, alpha 1 -0.0728689
CEMIP cell migration inducing protein, hyaluronan binding -0.0683512
VIM vimentin -0.0676768
COL1A1 collagen, type I, alpha 1 -0.0666662
KDM3A lysine (K)-specific demethylase 3A -0.059457
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0573855
NDRG1 N-myc downstream regulated 1 -0.0558842
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0468199
MAP1B microtubule-associated protein 1B -0.0460139
MARCHF6 membrane associated ring-CH-type finger 6 -0.0455915
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0448387
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.042987
ZNF804A zinc finger protein 804A -0.0396326
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0389186
WDR45B WD repeat domain 45B -0.0379691
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0379128
OGA O-GlcNAcase -0.0378551
WSB1 WD repeat and SOCS box containing 1 -0.0374645
GRB2 growth factor receptor-bound protein 2 -0.0374239
IGFBP5 insulin-like growth factor binding protein 5 -0.0365209
PTMA prothymosin, alpha -0.0362916
MAML2 mastermind-like 2 (Drosophila) -0.0358484
APP amyloid beta (A4) precursor protein -0.0351697
NPR2 natriuretic peptide receptor 2 -0.0347104
HAND2 heart and neural crest derivatives expressed 2 -0.0344356
SSBP2 single-stranded DNA binding protein 2 -0.0343795
SEPTIN9 septin 9 -0.0343285
BICD1 bicaudal D homolog 1 (Drosophila) -0.034017
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0328603
TRIO trio Rho guanine nucleotide exchange factor -0.0327572
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0327102
TCF12 transcription factor 12 -0.0317351
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0316644
ENO1 enolase 1, (alpha) -0.0316068
PKM pyruvate kinase, muscle -0.0313911
PCDH9 protocadherin 9 -0.0312967
MXI1 MAX interactor 1, dimerization protein -0.031267
RPS3 ribosomal protein S3 -0.0312151
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0305399
PDZRN3 PDZ domain containing ring finger 3 -0.0304836
FAM13A family with sequence similarity 13, member A -0.0303889
RPS24 ribosomal protein S24 -0.0300121
CADM1 cell adhesion molecule 1 -0.0296075
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.0293232
PCNP PEST proteolytic signal containing nuclear protein -0.0291695
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0288976
MYO1D myosin ID -0.0287926
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0280689
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0278759
H3-3B H3.3 histone B -0.0274451
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0273415
ATP13A3 ATPase type 13A3 -0.0272991
FKBP10 FK506 binding protein 10, 65 kDa -0.0272662
RAB1A RAB1A, member RAS oncogene family -0.0271838
NREP neuronal regeneration related protein -0.0271211
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0269805
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.026905
SLIT2 slit homolog 2 (Drosophila) -0.0268026
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D -0.0266853
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0265448
MAP2K4 mitogen-activated protein kinase kinase 4 -0.0264925
DST dystonin -0.0262944
LCORL ligand dependent nuclear receptor corepressor-like -0.0262745
QKI QKI, KH domain containing, RNA binding -0.0260425
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0260308
CCDC47 coiled-coil domain containing 47 -0.0260123
EPAS1 endothelial PAS domain protein 1 -0.0256537
NEK7 NIMA-related kinase 7 -0.0255399
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0254921
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0253542
RLIM ring finger protein, LIM domain interacting -0.0252694
IER3 immediate early response 3 -0.0252648
AFF3 AF4/FMR2 family, member 3 -0.0252137
GPC5 glypican 5 -0.0252064
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0251979
ACTG1 actin gamma 1 -0.024993
COL18A1 collagen, type XVIII, alpha 1 -0.0249747
TPT1 tumor protein, translationally-controlled 1 -0.0249685
PLCB4 phospholipase C, beta 4 -0.0249485
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0247906
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0247282
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0246196
ARHGAP9 Rho GTPase activating protein 9 -0.0245382
DIAPH3 diaphanous-related formin 3 -0.0244971
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0243009
ANXA2 annexin A2 -0.0242684
PSD3 pleckstrin and Sec7 domain containing 3 -0.0240104
DTNA dystrobrevin, alpha -0.0238699
PHF21A PHD finger protein 21A -0.0238095
H1-0 H1.0 linker histone -0.0237706
SLC38A2 solute carrier family 38, member 2 -0.0237701
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.023725
CUX1 cut-like homeobox 1 -0.0236593
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0236484
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0235694
HSPA8 heat shock 70kDa protein 8 -0.0234232
RAB7A RAB7A, member RAS oncogene family -0.0233627
AHNAK AHNAK nucleoprotein -0.0232691