Lenalidomide (hemihydrate)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lenalidomide (hemihydrate) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lenalidomide (hemihydrate)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYO1E myosin IE 0.144699
LMO7 LIM domain 7 0.109779
CEMIP cell migration inducing protein, hyaluronan binding 0.10655
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.106265
KYNU kynureninase 0.0932424
IGF1R insulin-like growth factor 1 receptor 0.0885151
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0842728
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0783056
ESYT2 extended synaptotagmin-like protein 2 0.0680025
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0661738
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6 0.0602209
STRN3 striatin, calmodulin binding protein 3 0.0599879
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0597665
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0596305
MAST4 microtubule associated serine/threonine kinase family member 4 0.058598
MAML3 mastermind-like 3 (Drosophila) 0.0581121
USP9X ubiquitin specific peptidase 9, X-linked 0.0574779
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0563617
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0554589
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0550049
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0544556
BTBD9 BTB (POZ) domain containing 9 0.0535477
CA12 carbonic anhydrase XII 0.0531511
RNF149 ring finger protein 149 0.0530774
BACE2 beta-site APP-cleaving enzyme 2 0.0530143
ARHGAP21 Rho GTPase activating protein 21 0.0524893
SERTAD2 SERTA domain containing 2 0.0523532
ZRANB2 zinc finger, RAN-binding domain containing 2 0.0522519
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0507689
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0507653
DPYD dihydropyrimidine dehydrogenase 0.0506951
PLAUR plasminogen activator, urokinase receptor 0.050271
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0494567
NT5C2 5'-nucleotidase, cytosolic II 0.0493007
GCLC glutamate-cysteine ligase, catalytic subunit 0.0492041
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0491289
PIAS1 protein inhibitor of activated STAT, 1 0.0488694
VCL vinculin 0.0488064
STEAP4 STEAP family member 4 0.0487047
SIK3 SIK family kinase 3 0.048108
MYO6 myosin VI 0.0479356
PRKCA protein kinase C, alpha 0.0478706
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0476809
RNF213 ring finger protein 213 0.0463778
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0459147
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0451233
IRS2 insulin receptor substrate 2 0.0448604
OGA O-GlcNAcase 0.04455
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0444488
CSNK1A1 casein kinase 1, alpha 1 0.0440361
TXNRD1 thioredoxin reductase 1 0.0439143
NPAS2 neuronal PAS domain protein 2 0.0435653
ACTN4 actinin, alpha 4 0.0432589
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0432583
SRSF4 serine/arginine-rich splicing factor 4 0.0431993
SVIL supervillin 0.0429787
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0418769
SOS1 son of sevenless homolog 1 (Drosophila) 0.0418374
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0418137
AKAP13 A kinase (PRKA) anchor protein 13 0.0410057
EFNA5 ephrin-A5 0.0409489
PDE4D phosphodiesterase 4D, cAMP-specific 0.0406461
ERRFI1 ERBB receptor feedback inhibitor 1 0.04061
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0402204
MACC1 metastasis associated in colon cancer 1 0.0397107
SON SON DNA binding protein 0.0396948
RAD51B RAD51 paralog B 0.0395126
UBE2H ubiquitin-conjugating enzyme E2H 0.0394462
ANKRD17 ankyrin repeat domain 17 0.0393603
KMT2C lysine (K)-specific methyltransferase 2C 0.0387173
GRAMD1B GRAM domain containing 1B 0.0386918
ASPH aspartate beta-hydroxylase 0.0385701
MAML2 mastermind-like 2 (Drosophila) 0.0383251
LGALS3 lectin, galactoside-binding, soluble, 3 0.037194
SDC4 syndecan 4 0.0371214
WWTR1 WW domain containing transcription regulator 1 0.0366843
PDIA5 protein disulfide isomerase family A, member 5 0.0366168
N4BP2L2 NEDD4 binding protein 2-like 2 0.0365951
LIMS1 LIM and senescent cell antigen-like domains 1 0.0365524
GRB10 growth factor receptor-bound protein 10 0.0363904
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.036356
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.036279
COL6A3 collagen, type VI, alpha 3 0.0357763
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0356646
MED13L mediator complex subunit 13-like 0.0355533
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0354607
TXNIP thioredoxin interacting protein 0.0352853
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.035274
MYO5B myosin VB 0.0352172
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0346362
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0344981
DOCK4 dedicator of cytokinesis 4 0.0343985
ARHGAP26 Rho GTPase activating protein 26 0.0339565
HOMER1 homer scaffolding protein 1 0.033748
EGFR epidermal growth factor receptor 0.0334685
EZR ezrin 0.0333958
SPIDR scaffolding protein involved in DNA repair 0.0332351
ADGRB3 adhesion G protein-coupled receptor B3 0.0328625
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0325212
AOPEP aminopeptidase O (putative) 0.032292

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.280141
FN1 fibronectin 1 -0.203776
AKAP12 A kinase (PRKA) anchor protein 12 -0.141725
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0973865
IFIH1 interferon induced with helicase C domain 1 -0.0918058
SPAG9 sperm associated antigen 9 -0.0769234
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0730012
RPL26 ribosomal protein L26 -0.0697453
VIM vimentin -0.0673402
PICALM phosphatidylinositol binding clathrin assembly protein -0.0628436
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0622289
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0609221
ZNF292 zinc finger protein 292 -0.0606556
PAPOLA poly(A) polymerase alpha -0.0583593
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0571403
NPTN neuroplastin -0.0567972
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 -0.0544512
RAB7A RAB7A, member RAS oncogene family -0.0543713
RPL35A ribosomal protein L35a -0.0539359
MUC16 mucin 16, cell surface associated -0.0537151
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0537077
TRIO trio Rho guanine nucleotide exchange factor -0.0518763
P4HB prolyl 4-hydroxylase, beta polypeptide -0.05136
ABHD17C abhydrolase domain containing 17C -0.0510099
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.0507055
ATOSA atos homolog A -0.0495953
FAM13A family with sequence similarity 13, member A -0.0494517
RNF145 ring finger protein 145 -0.0491989
MYO10 myosin X -0.0486598
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0482972
LDHA lactate dehydrogenase A -0.0480435
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0470103
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 -0.0469483
S100A6 S100 calcium binding protein A6 -0.0468249
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0459785
SFTPA2 surfactant protein A2 -0.0459367
RPS25 ribosomal protein S25 -0.0454818
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced -0.0449307
RPS16 ribosomal protein S16 -0.0448965
RPLP0 ribosomal protein, large, P0 -0.0447732
MAP1B microtubule-associated protein 1B -0.044388
MRTFA myocardin related transcription factor A -0.0438473
RPS12 ribosomal protein S12 -0.043754
LPP LIM domain containing preferred translocation partner in lipoma -0.04336
RPL12 ribosomal protein L12 -0.0432767
MEF2A myocyte enhancer factor 2A -0.0430578
ATF6 activating transcription factor 6 -0.0430086
RHOA ras homolog family member A -0.0427268
IFRD1 interferon-related developmental regulator 1 -0.0425314
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0424138
GOLGA4 golgin A4 -0.0423856
SLC38A1 solute carrier family 38, member 1 -0.0423035
RACK1 receptor for activated C kinase 1 -0.0422116
RAB6A RAB6A, member RAS oncogene family -0.0421145
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0416535
TSC22D2 TSC22 domain family, member 2 -0.0412766
FLNB filamin B, beta -0.0411665
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0410711
TMSB10 thymosin beta 10 -0.0409612
RPL9 ribosomal protein L9 -0.0408166
SOX4 SRY (sex determining region Y)-box 4 -0.0404205
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0402735
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0400128
MON2 MON2 homolog (S. cerevisiae) -0.0398427
PRRC2C proline-rich coiled-coil 2C -0.0389841
FAT1 FAT atypical cadherin 1 -0.0386725
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0368897
OXSR1 oxidative stress responsive 1 -0.0367859
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.036777
GPBP1 GC-rich promoter binding protein 1 -0.03652
ELL2 elongation factor, RNA polymerase II, 2 -0.0361082
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0360249
IER3 immediate early response 3 -0.0359381
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0356915
NALF1 NALCN channel auxiliary factor 1 -0.0356113
STK17A serine/threonine kinase 17a -0.0345584
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0341346
MEIS2 Meis homeobox 2 -0.0339694
CDYL chromodomain protein, Y-like -0.0337237
KDM2A lysine (K)-specific demethylase 2A -0.0333764
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0333641
RPLP1 ribosomal protein, large, P1 -0.0332887
ENO1 enolase 1, (alpha) -0.0332843
CAMTA1 calmodulin binding transcription activator 1 -0.0327785
OSBPL8 oxysterol binding protein-like 8 -0.0326912
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0325481
RPL5 ribosomal protein L5 -0.032465
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.032436
KPNB1 karyopherin (importin) beta 1 -0.0324327
KLF6 Kruppel-like factor 6 -0.0324232
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0323878
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0322806
PTMA prothymosin, alpha -0.0321684
RPS24 ribosomal protein S24 -0.0317856
TAS2R14 taste receptor, type 2, member 14 -0.0317551
POTEF POTE ankyrin domain family, member F -0.0316887
UGCG UDP-glucose ceramide glucosyltransferase -0.0315707
RPS6 ribosomal protein S6 -0.0315118
ABI1 abl-interactor 1 -0.0314927
MATR3 matrin 3 -0.031405